RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 IFNA10P01566 189 aa12.45□□□□□ -0.42
SMC4-216ENST00000485645 RBMY1A1P0DJD3 496 aaKnown RBP12.45□□□□□ -0.42
SMC4-216ENST00000485645 RBMY1CP0DJD4 496 aa12.45□□□□□ -0.42
SMC4-216ENST00000485645 C4BPBP20851 252 aa12.45□□□□□ -0.42
SMC4-216ENST00000485645 RBMY1FQ15415 496 aaKnown RBP12.45□□□□□ -0.42
SMC4-216ENST00000485645 USF2Q15853 346 aaPredicted RBP12.45□□□□□ -0.42
SMC4-216ENST00000485645 NMSQ5H8A3 153 aa12.45□□□□□ -0.42
SMC4-216ENST00000485645 PSMG4Q5JS54 123 aa12.45□□□□□ -0.42
SMC4-216ENST00000485645 ACY3Q96HD9 319 aa12.45□□□□□ -0.42
SMC4-216ENST00000485645 RAB40CQ96S21 281 aa12.45□□□□□ -0.42
SMC4-216ENST00000485645 U3KQ87 197 aa12.45□□□□□ -0.42
SMC4-216ENST00000485645 DNAH6Q9C0G6 4158 aa12.45□□□□□ -0.42
SMC4-216ENST00000485645 IGLL5B9A064 214 aa12.44□□□□□ -0.42
SMC4-216ENST00000485645 TOMM40O96008 361 aa12.44□□□□□ -0.42
SMC4-216ENST00000485645 RD3LP0DJH9 198 aa12.44□□□□□ -0.42
SMC4-216ENST00000485645 SNRPD3P62318 126 aaKnown RBP12.44□□□□□ -0.42
SMC4-216ENST00000485645 CENPSQ8N2Z9 138 aa12.44□□□□□ -0.42
SMC4-216ENST00000485645 PRR13Q9NZ81 148 aa12.44□□□□□ -0.42
SMC4-216ENST00000485645 A0A0B4J2A0 478 aa12.43□□□□□ -0.42
SMC4-216ENST00000485645 BUB3O43684 328 aa12.43□□□□□ -0.42
SMC4-216ENST00000485645 AKR1C4P17516 323 aa12.43□□□□□ -0.42
SMC4-216ENST00000485645 CCR6P51684 374 aa12.43□□□□□ -0.42
SMC4-216ENST00000485645 BAK1Q16611 211 aa12.43□□□□□ -0.42
SMC4-216ENST00000485645 SIGLEC15Q6ZMC9 328 aa12.43□□□□□ -0.42
SMC4-216ENST00000485645 DTD1Q8TEA8 209 aa12.43□□□□□ -0.42
SMC4-216ENST00000485645 SLC25A21Q9BQT8 299 aaPredicted RBP12.43□□□□□ -0.42
SMC4-216ENST00000485645 CLEC5AQ9NY25 188 aa12.43□□□□□ -0.42
SMC4-216ENST00000485645 SHPKQ9UHJ6 478 aa12.43□□□□□ -0.42
SMC4-216ENST00000485645 TBC1D24Q9ULP9 559 aa12.43□□□□□ -0.42
SMC4-216ENST00000485645 X6R8D5 127 aa12.43□□□□□ -0.42
SMC4-216ENST00000485645 FAM90A26D6RGX4 464 aa12.42□□□□□ -0.42
SMC4-216ENST00000485645 PSG1P11464 419 aa12.42□□□□□ -0.42
SMC4-216ENST00000485645 HLA-DMBP28068 263 aa12.42□□□□□ -0.42
SMC4-216ENST00000485645 NUTF2P61970 127 aaKnown RBP12.42□□□□□ -0.42
SMC4-216ENST00000485645 SUPT4H1P63272 117 aaKnown RBP12.42□□□□□ -0.42
SMC4-216ENST00000485645 SMCO1Q147U7 214 aa12.42□□□□□ -0.42
SMC4-216ENST00000485645 TRIQKQ629K1 86 aa12.42□□□□□ -0.42
SMC4-216ENST00000485645 LYZL2Q7Z4W2 148 aa12.42□□□□□ -0.42
SMC4-216ENST00000485645 LGI3Q8N145 548 aa12.42□□□□□ -0.42
SMC4-216ENST00000485645 CSNK1G2-AS1Q8NCQ2 148 aa12.42□□□□□ -0.42
SMC4-216ENST00000485645 SDHCQ99643 169 aaPredicted RBP12.42□□□□□ -0.42
SMC4-216ENST00000485645 SEPSECSQ9HD40 501 aaKnown RBP12.42□□□□□ -0.42
SMC4-216ENST00000485645 NRN1Q9NPD7 142 aa12.42□□□□□ -0.42
SMC4-216ENST00000485645 HSPB7Q9UBY9 170 aa12.42□□□□□ -0.42
SMC4-216ENST00000485645 APLNQ9ULZ1 77 aa12.42□□□□□ -0.42
SMC4-216ENST00000485645 ANXA3P12429 323 aa12.41□□□□□ -0.42
SMC4-216ENST00000485645 INPP1P49441 399 aa12.41□□□□□ -0.42
SMC4-216ENST00000485645 TMEM128Q5BJH2 165 aa12.41□□□□□ -0.42
SMC4-216ENST00000485645 OR51G1Q8NGK1 321 aa12.41□□□□□ -0.42
SMC4-216ENST00000485645 C1QTNF4Q9BXJ3 329 aa12.41□□□□□ -0.42
SMC4-216ENST00000485645 RBKSQ9H477 322 aa12.41□□□□□ -0.42
SMC4-216ENST00000485645 ELOA3CA0A087WX78 387 aaPredicted RBP12.4□□□□□ -0.42
SMC4-216ENST00000485645 TRAV10A0A0B4J240 114 aa12.4□□□□□ -0.42
SMC4-216ENST00000485645 ATP5IP56385 69 aaPredicted RBP12.4□□□□□ -0.42
SMC4-216ENST00000485645 SRPXP78539 464 aa12.4□□□□□ -0.42
SMC4-216ENST00000485645 PRR20EP86478 221 aa12.4□□□□□ -0.42
SMC4-216ENST00000485645 PRR20CP86479 221 aa12.4□□□□□ -0.42
SMC4-216ENST00000485645 PRR20DP86480 221 aa12.4□□□□□ -0.42
SMC4-216ENST00000485645 PRR20BP86481 221 aa12.4□□□□□ -0.42
SMC4-216ENST00000485645 PRR20AP86496 221 aa12.4□□□□□ -0.42
SMC4-216ENST00000485645 Q6ZTC4 211 aa12.4□□□□□ -0.42
SMC4-216ENST00000485645 TMED4Q7Z7H5 227 aa12.4□□□□□ -0.42
SMC4-216ENST00000485645 RNF125Q96EQ8 232 aa12.4□□□□□ -0.42
SMC4-216ENST00000485645 PBDC1Q9BVG4 233 aa12.4□□□□□ -0.42
SMC4-216ENST00000485645 PFDN2Q9UHV9 154 aa12.4□□□□□ -0.42
SMC4-216ENST00000485645 NAP1L6A6NFF2 107 aa12.39□□□□□ -0.43
SMC4-216ENST00000485645 ZFP92A6NM28 416 aa12.39□□□□□ -0.43
SMC4-216ENST00000485645 H3BMM0 161 aa12.39□□□□□ -0.43
SMC4-216ENST00000485645 NUP62P37198 522 aaPredicted RBP12.39□□□□□ -0.43
SMC4-216ENST00000485645 OR1S1Q8NH92 325 aa12.39□□□□□ -0.43
SMC4-216ENST00000485645 XCL2Q9UBD3 114 aa12.39□□□□□ -0.43
SMC4-216ENST00000485645 PIGBOS1A0A0B4J2F0 54 aa12.38□□□□□ -0.43
SMC4-216ENST00000485645 A6NHS1 94 aa12.38□□□□□ -0.43
SMC4-216ENST00000485645 IL7P13232 177 aa12.38□□□□□ -0.43
SMC4-216ENST00000485645 GPX4P36969 197 aaPredicted RBP12.38□□□□□ -0.43
SMC4-216ENST00000485645 NKX2-1P43699 371 aaPredicted RBP12.38□□□□□ -0.43
SMC4-216ENST00000485645 OR8G2PQ6IF36 304 aa12.38□□□□□ -0.43
SMC4-216ENST00000485645 LINC00299Q6ZSB3 139 aa12.38□□□□□ -0.43
SMC4-216ENST00000485645 SLC35E1Q96K37 410 aa12.38□□□□□ -0.43
SMC4-216ENST00000485645 HLA-DRB4P13762 266 aa12.37□□□□□ -0.43
SMC4-216ENST00000485645 GAMTQ14353 236 aa12.37□□□□□ -0.43
SMC4-216ENST00000485645 C7orf50Q9BRJ6 194 aaKnown RBP12.37□□□□□ -0.43
SMC4-216ENST00000485645 HLA-DRB4X5D2U9 266 aa12.37□□□□□ -0.43
SMC4-216ENST00000485645 IGHV4-4A0A075B6R2 117 aa12.36□□□□□ -0.43
SMC4-216ENST00000485645 IGKV1D-37A0A075B6S9 117 aa12.36□□□□□ -0.43
SMC4-216ENST00000485645 LINC00854A0A1B0GVQ3 168 aa12.36□□□□□ -0.43
SMC4-216ENST00000485645 CENPXA8MT69 81 aa12.36□□□□□ -0.43
SMC4-216ENST00000485645 NDUFB6O95139 128 aa12.36□□□□□ -0.43
SMC4-216ENST00000485645 FABP1P07148 127 aa12.36□□□□□ -0.43
SMC4-216ENST00000485645 VAMP1P23763 118 aa12.36□□□□□ -0.43
SMC4-216ENST00000485645 RAB11AP62491 216 aa12.36□□□□□ -0.43
SMC4-216ENST00000485645 ZNF90Q03938 601 aa12.36□□□□□ -0.43
SMC4-216ENST00000485645 CELA1Q9UNI1 258 aa12.36□□□□□ -0.43
SMC4-216ENST00000485645 DUXBA0A1W2PPF3 345 aa12.35□□□□□ -0.43
SMC4-216ENST00000485645 ID1P41134 155 aa12.35□□□□□ -0.43
SMC4-216ENST00000485645 UBE2MP61081 183 aaKnown RBP12.35□□□□□ -0.43
SMC4-216ENST00000485645 LYZP61626 148 aa12.35□□□□□ -0.43
SMC4-216ENST00000485645 PPP1R1AQ13522 171 aa12.35□□□□□ -0.43
SMC4-216ENST00000485645 C12orf74Q32Q52 190 aa12.35□□□□□ -0.43
SMC4-216ENST00000485645 CNPY1Q3B7I2 92 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms