RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 UBE2L3P68036 154 aaKnown RBP13.13□□□□□ -0.31
CTSA-207ENST00000484855 LY6EQ16553 131 aa13.13□□□□□ -0.31
CTSA-207ENST00000484855 NAV2Q8IVL1 2488 aa13.13□□□□□ -0.31
CTSA-207ENST00000484855 GNG7O60262 68 aa13.13□□□□□ -0.31
CTSA-207ENST00000484855 NDUFB8O95169 186 aa13.13□□□□□ -0.31
CTSA-207ENST00000484855 NPPCP23582 126 aa13.13□□□□□ -0.31
CTSA-207ENST00000484855 MFAP4P55083 255 aa13.13□□□□□ -0.31
CTSA-207ENST00000484855 LYZP61626 148 aa13.13□□□□□ -0.31
CTSA-207ENST00000484855 LINC01548A6NM66 108 aa13.12□□□□□ -0.31
CTSA-207ENST00000484855 HIST1H1BP16401 226 aaKnown RBP13.12□□□□□ -0.31
CTSA-207ENST00000484855 TMEM241Q24JQ0 296 aa13.12□□□□□ -0.31
CTSA-207ENST00000484855 TMEM68Q96MH6 324 aa13.12□□□□□ -0.31
CTSA-207ENST00000484855 ZNF48Q96MX3 618 aaPredicted RBP13.12□□□□□ -0.31
CTSA-207ENST00000484855 PAXXQ9BUH6 204 aa13.12□□□□□ -0.31
CTSA-207ENST00000484855 C21orf62Q9NYP8 219 aa13.12□□□□□ -0.31
CTSA-207ENST00000484855 TRAV30A0A087WSZ9 112 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 SCO2A0A1W2PP80 73 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 A6NDX4 124 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 B4DEV8 164 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 AMY1AP04745 511 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 RD3LP0DJH9 198 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 Q56UQ5 140 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 C16orf82Q7Z2V1 217 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 FBXL7Q9UJT9 491 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 HIGD1AQ9Y241 93 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 NDUFB4O95168 129 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 PYYP10082 97 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 PRSS57Q6UWY2 283 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 OR51M1Q9H341 326 aa13.11□□□□□ -0.31
CTSA-207ENST00000484855 A0A087WWC5 75 aa13.1□□□□□ -0.31
CTSA-207ENST00000484855 G3V318 75 aa13.1□□□□□ -0.31
CTSA-207ENST00000484855 TOMM40O96008 361 aa13.1□□□□□ -0.31
CTSA-207ENST00000484855 ADIRFQ15847 76 aa13.1□□□□□ -0.31
CTSA-207ENST00000484855 KRTAP1-3Q8IUG1 177 aa13.1□□□□□ -0.31
CTSA-207ENST00000484855 ISOC2Q96AB3 205 aa13.1□□□□□ -0.31
CTSA-207ENST00000484855 PITPNC1Q9UKF7 332 aa13.1□□□□□ -0.31
CTSA-207ENST00000484855 MDFIC2A0A1B0GVS7 189 aa13.1□□□□□ -0.31
CTSA-207ENST00000484855 C9orf152Q5JTZ5 239 aa13.1□□□□□ -0.31
CTSA-207ENST00000484855 C15orf54Q8N8G6 183 aa13.1□□□□□ -0.31
CTSA-207ENST00000484855 STXBP6Q8NFX7 210 aa13.1□□□□□ -0.31
CTSA-207ENST00000484855 DERL1Q9BUN8 251 aa13.1□□□□□ -0.31
CTSA-207ENST00000484855 TUBA4BQ9H853 241 aa13.1□□□□□ -0.31
CTSA-207ENST00000484855 F8W735 103 aaPredicted RBP13.09□□□□□ -0.31
CTSA-207ENST00000484855 IGHV3-23P01764 117 aa13.09□□□□□ -0.31
CTSA-207ENST00000484855 PRRC2AP48634 2157 aaKnown RBP13.09□□□□□ -0.31
CTSA-207ENST00000484855 A0A1W2PRE2 83 aa13.08□□□□□ -0.31
CTSA-207ENST00000484855 OR2C1O95371 312 aa13.08□□□□□ -0.31
CTSA-207ENST00000484855 YPEL3P61236 119 aaPredicted RBP13.08□□□□□ -0.31
CTSA-207ENST00000484855 RPL23P62829 140 aaKnown RBP13.08□□□□□ -0.31
CTSA-207ENST00000484855 KLK9Q2XQG4 91 aa13.08□□□□□ -0.31
CTSA-207ENST00000484855 VN1R17PQ8TDU5 208 aa13.08□□□□□ -0.31
CTSA-207ENST00000484855 KLK9Q9UKQ9 250 aa13.08□□□□□ -0.31
CTSA-207ENST00000484855 M0QZK8 103 aa13.08□□□□□ -0.32
CTSA-207ENST00000484855 SCGB2A1O75556 95 aa13.08□□□□□ -0.32
CTSA-207ENST00000484855 C11orf52Q96A22 123 aa13.08□□□□□ -0.32
CTSA-207ENST00000484855 FXYD5Q96DB9 178 aa13.08□□□□□ -0.32
CTSA-207ENST00000484855 CSPG4Q6UVK1 2322 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 COLCA2A8K830 154 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 GGTLC3B5MD39 225 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 IL4P05112 153 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 ATF4P18848 351 aaPredicted RBP13.07□□□□□ -0.32
CTSA-207ENST00000484855 CRIP2P52943 208 aaPredicted RBP13.07□□□□□ -0.32
CTSA-207ENST00000484855 RHOGP84095 191 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 DEFB112Q30KQ8 113 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 C15orf32Q32M92 178 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 BCL6BQ8N143 479 aaPredicted RBP13.07□□□□□ -0.32
CTSA-207ENST00000484855 RNF125Q96EQ8 232 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 TXN2Q99757 166 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 SLC25A39Q9BZJ4 359 aaPredicted RBP13.07□□□□□ -0.32
CTSA-207ENST00000484855 MRPL27Q9P0M9 148 aaKnown RBP13.07□□□□□ -0.32
CTSA-207ENST00000484855 ZANQ9Y493 2812 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 TRBV9A0A0B4J1U6 114 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 TRAV41A0A0B4J266 112 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 OR2T8A6NH00 312 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 LEMD1Q68G75 181 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 ZNF491Q8N8L2 437 aa13.07□□□□□ -0.32
CTSA-207ENST00000484855 FCGR2BP31994 310 aaPredicted RBP13.06□□□□□ -0.32
CTSA-207ENST00000484855 WI2-2373I1.2A0A1W2PRP0 233 aa13.05□□□□□ -0.32
CTSA-207ENST00000484855 GP9P14770 177 aa13.05□□□□□ -0.32
CTSA-207ENST00000484855 SUMO1P63165 101 aaKnown RBP13.05□□□□□ -0.32
CTSA-207ENST00000484855 RNF212Q495C1 297 aa13.05□□□□□ -0.32
CTSA-207ENST00000484855 C19orf54Q5BKX5 351 aa13.05□□□□□ -0.32
CTSA-207ENST00000484855 NECAP1Q8NC96 275 aa13.05□□□□□ -0.32
CTSA-207ENST00000484855 Q8WTZ3 238 aa13.05□□□□□ -0.32
CTSA-207ENST00000484855 LINC00527Q9UJ94 153 aa13.05□□□□□ -0.32
CTSA-207ENST00000484855 HELZ2Q9BYK8 2649 aaKnown RBP13.05□□□□□ -0.32
CTSA-207ENST00000484855 CYB5R2Q6BCY4 276 aa13.05□□□□□ -0.32
CTSA-207ENST00000484855 ZNF502Q8TBZ5 544 aa13.05□□□□□ -0.32
CTSA-207ENST00000484855 HIST1H2BAQ96A08 127 aa13.05□□□□□ -0.32
CTSA-207ENST00000484855 MS4A10Q96PG2 267 aa13.05□□□□□ -0.32
CTSA-207ENST00000484855 PRELID1Q9Y255 219 aa13.05□□□□□ -0.32
CTSA-207ENST00000484855 FSHBP01225 129 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 IGHG2P01859 326 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 CRYBB3P26998 211 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 FAM24BQ8N5W8 94 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 CXorf65A6NEN9 183 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 H3BRN7 92 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 IGHV4-59P01825 116 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 MT-ND4LP03901 98 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 IGF1P05019 195 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms