RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 PRSS29PA6NIE9 313 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 ZNHIT1O43257 154 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 JPT1Q9UK76 154 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 CEP290O15078 2479 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 hCG_38984A0A1B0GV85 526 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 RASL10BQ96S79 203 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 TMEM74BQ9NUR3 256 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 LYL1P12980 280 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 AMTNQ6UX39 209 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 SH2D6Q7Z4S9 175 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 V9GYY9 64 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 CCL1P22362 96 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 UTF1Q5T230 341 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 ZNF826PQ6ZT77 177 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 C9orf40Q8IXQ3 194 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 PLEKHB2Q96CS7 222 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 RBMY1FQ15415 496 aaKnown RBP8.57□□□□□ -1.04
COL12A1-207ENST00000483888 CACNG8Q8WXS5 425 aa8.57□□□□□ -1.04
COL12A1-207ENST00000483888 IGKV3-20P01619 116 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 SUPT4H1P63272 117 aaKnown RBP8.56□□□□□ -1.04
COL12A1-207ENST00000483888 SPINK14Q6IE38 97 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 PPP1R32Q7Z5V6 425 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 C18orf32Q8TCD1 76 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 TMEM158Q8WZ71 300 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 IGHV1-24A0A0C4DH33 117 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 FGF6P10767 208 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 CCDC144NLQ6NUI1 221 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 CCL13Q99616 98 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 ASCL2Q99929 193 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 PRADC1Q9BSG0 188 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 TRAV40A0A0B4J280 105 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 IGHV3-66A0A0C4DH42 116 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 OR9G1Q8NH87 305 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 GFI1Q99684 422 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 CCL7P80098 99 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 RPP25LQ8N5L8 163 aaKnown RBP8.56□□□□□ -1.04
COL12A1-207ENST00000483888 SPXQ9BT56 116 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 RNF115Q9Y4L5 304 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 NPIPB13A6NJU9 1138 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 BRCA1P38398 1863 aaKnown RBP8.56□□□□□ -1.04
COL12A1-207ENST00000483888 MORN5Q5VZ52 161 aa8.56□□□□□ -1.04
COL12A1-207ENST00000483888 ID3Q02535 119 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 DUSP15Q9H1R2 295 aaPredicted RBP8.55□□□□□ -1.04
COL12A1-207ENST00000483888 SOCS3O14543 225 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 VDAC2P45880 294 aaPredicted RBP8.55□□□□□ -1.04
COL12A1-207ENST00000483888 TMEM52Q8NDY8 209 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 LY96Q9Y6Y9 160 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 J3QRE1 110 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 IGHG4P01861 327 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 SVIPQ8NHG7 77 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 APOBEC3AP31941 199 aaPredicted RBP8.55□□□□□ -1.04
COL12A1-207ENST00000483888 SYNJ2BPP57105 145 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 CRYBA2P53672 197 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 HAPLN4Q86UW8 402 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 DEFB125Q8N687 156 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 MYMXA0A1B0GTQ4 84 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 NPIPB5A8MRT5 1133 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 LEPROTO15243 131 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 PFN1P07737 140 aaKnown RBP8.55□□□□□ -1.04
COL12A1-207ENST00000483888 FOXA2Q9Y261 457 aaPredicted RBP8.55□□□□□ -1.04
COL12A1-207ENST00000483888 LMO7DNF2Z398 122 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 NPPCP23582 126 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 TMEM86BQ8N661 226 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 DUX5Q96PT3 197 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 PRDM14Q9GZV8 571 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 PRR14LQ5THK1 2151 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 C3orf56Q8N813 242 aa8.55□□□□□ -1.04
COL12A1-207ENST00000483888 LINC00158P58513 81 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 LCTP09848 1927 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 PSG8Q9UQ74 426 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 LIFP15018 202 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 COL9A1P20849 921 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 HGFACQ04756 655 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 ZNF721Q8TF20 911 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 EML5Q05BV3 1969 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 C22orf46C9J442 243 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 ANKRD39Q53RE8 183 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 C8orf86Q6ZUL3 223 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 TMEM171Q8WVE6 324 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 ADAMTSL1Q8N6G6 1762 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 PKDREJQ9NTG1 2253 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 A0A0A6YYD4 124 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 IGKV1D-13A0A0B4J2D9 117 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 IGHV3-35A0A0C4DH35 117 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 IGKV1-13P0DP09 117 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 TMEM243Q9BU79 118 aa8.54□□□□□ -1.04
COL12A1-207ENST00000483888 MRPS18CQ9Y3D5 142 aaKnown RBP8.53□□□□□ -1.04
COL12A1-207ENST00000483888 IGHV3-23P01764 117 aa8.53□□□□□ -1.04
COL12A1-207ENST00000483888 APOBEC4Q8WW27 367 aaKnown RBP8.53□□□□□ -1.04
COL12A1-207ENST00000483888 ELSPBP1Q96BH3 223 aa8.53□□□□□ -1.04
COL12A1-207ENST00000483888 PNRC2Q9NPJ4 139 aaKnown RBP8.53□□□□□ -1.04
COL12A1-207ENST00000483888 SNRPD3P62318 126 aaKnown RBP8.53□□□□□ -1.04
COL12A1-207ENST00000483888 A0A087WV48 116 aa8.53□□□□□ -1.04
COL12A1-207ENST00000483888 FAM236AA0A1B0GUQ0 79 aa8.53□□□□□ -1.04
COL12A1-207ENST00000483888 FAM236BA0A1B0GV22 79 aa8.53□□□□□ -1.04
COL12A1-207ENST00000483888 PAX1P15863 534 aa8.53□□□□□ -1.04
COL12A1-207ENST00000483888 OR11H6Q8NGC7 330 aa8.53□□□□□ -1.04
COL12A1-207ENST00000483888 SMKR1H3BMG3 65 aa8.53□□□□□ -1.04
COL12A1-207ENST00000483888 PRB3Q04118 309 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-207ENST00000483888 CTHRC1Q96CG8 243 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms