RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 SMPXQ9UHP9 88 aa9.55□□□□□ -0.88
VTI1A-205ENST00000483122 JPT1Q9UK76 154 aa9.55□□□□□ -0.88
VTI1A-205ENST00000483122 NBEAQ8NFP9 2946 aa9.55□□□□□ -0.88
VTI1A-205ENST00000483122 APOHP02749 345 aaPredicted RBP9.54□□□□□ -0.88
VTI1A-205ENST00000483122 SLC25A5P05141 298 aaKnown RBP9.54□□□□□ -0.88
VTI1A-205ENST00000483122 SMIM17P0DL12 118 aa9.54□□□□□ -0.88
VTI1A-205ENST00000483122 TMEM177Q53S58 311 aa9.54□□□□□ -0.88
VTI1A-205ENST00000483122 FXYD5Q96DB9 178 aa9.54□□□□□ -0.88
VTI1A-205ENST00000483122 HES7Q9BYE0 225 aa9.54□□□□□ -0.88
VTI1A-205ENST00000483122 FAM186AA6NE01 2351 aa9.54□□□□□ -0.88
VTI1A-205ENST00000483122 P01737 135 aa9.54□□□□□ -0.88
VTI1A-205ENST00000483122 FOLR3P41439 243 aa9.54□□□□□ -0.88
VTI1A-205ENST00000483122 OR10W1Q8NGF6 305 aa9.54□□□□□ -0.88
VTI1A-205ENST00000483122 ITLN1Q8WWA0 313 aa9.54□□□□□ -0.88
VTI1A-205ENST00000483122 ADTRPQ96IZ2 230 aa9.54□□□□□ -0.88
VTI1A-205ENST00000483122 MLST8Q9BVC4 326 aa9.54□□□□□ -0.88
VTI1A-205ENST00000483122 EPDR1Q9UM22 224 aa9.54□□□□□ -0.88
VTI1A-205ENST00000483122 KNTC1P50748 2209 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 C19orf71A6NCJ1 209 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 COX7A2P2O60397 106 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 RNASE2P10153 161 aaKnown RBP9.53□□□□□ -0.88
VTI1A-205ENST00000483122 ACP1P24666 158 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 MYCNOSP40205 109 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 CYB561P49447 251 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 PRCDQ00LT1 54 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 CD69Q07108 199 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 HSD52Q0P140 79 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 RBPMS2Q6ZRY4 209 aaKnown RBP9.53□□□□□ -0.88
VTI1A-205ENST00000483122 BOD1L2Q8IYS8 172 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 BLNKQ8WV28 456 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 SIGMAR1Q99720 223 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 SOX21Q9Y651 276 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-205ENST00000483122 OTOGLQ3ZCN5 2332 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 TEX50A0A1B0GTY4 177 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 A1L4Q6 167 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 SRRM4A7MD48 611 aaKnown RBP9.53□□□□□ -0.88
VTI1A-205ENST00000483122 ZNF207O43670 478 aaKnown RBP9.53□□□□□ -0.88
VTI1A-205ENST00000483122 FAM106CPP0CH98 169 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 SAA2P0DJI9 122 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-205ENST00000483122 FAM106AQ4KMX7 169 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 C2orf83Q53S99 150 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 C10orf113Q5VZT2 155 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 ADAMTSL5Q6ZMM2 481 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 OR8A1Q8NGG7 326 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 KLF14Q8TD94 323 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-205ENST00000483122 GPR82Q96P67 336 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 FZR1Q9UM11 496 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 INSIG2Q9Y5U4 225 aa9.53□□□□□ -0.88
VTI1A-205ENST00000483122 GPR179Q6PRD1 2367 aa9.52□□□□□ -0.88
VTI1A-205ENST00000483122 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.52□□□□□ -0.89
VTI1A-205ENST00000483122 PGPA6NDG6 321 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 SMAD7O15105 426 aaKnown RBP9.52□□□□□ -0.89
VTI1A-205ENST00000483122 IGHV3-48P01763 117 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 SCGB1A1P11684 91 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 CD59P13987 128 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 PRDX2P32119 198 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 MAGEA5P43359 124 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 TM4SF20Q53R12 229 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 Q71RC1 249 aaPredicted RBP9.52□□□□□ -0.89
VTI1A-205ENST00000483122 PPP1R32Q7Z5V6 425 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 ABHD17AQ96GS6 310 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 ZNF714Q96N38 554 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 AP5S1Q9NUS5 200 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 BOKQ9UMX3 212 aaPredicted RBP9.52□□□□□ -0.89
VTI1A-205ENST00000483122 ZNF257Q9Y2Q1 563 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 FSTL3O95633 263 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 CT45A1Q5HYN5 189 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 CT45A3Q8NHU0 189 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 CXXC4Q9H2H0 198 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 PRNDQ9UKY0 176 aa9.52□□□□□ -0.89
VTI1A-205ENST00000483122 TSSC4Q9Y5U2 329 aaPredicted RBP9.52□□□□□ -0.89
VTI1A-205ENST00000483122 PCSK5Q92824 1860 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 UPK2O00526 184 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 FABP2P12104 132 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 LOXL1Q08397 574 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-205ENST00000483122 IL11RAQ14626 422 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 CT83Q5H943 113 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 ATP6V0BQ99437 205 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 KLF12Q9Y4X4 402 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 A0A096LNJ9 63 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-205ENST00000483122 A0A1B0GV72 72 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 H3BTX0 84 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 CEACAM3P40198 252 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 SAMD5Q5TGI4 173 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 PCP2Q8IVA1 136 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 DPF1Q92782 380 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 C18orf15Q96N68 181 aa9.51□□□□□ -0.89
VTI1A-205ENST00000483122 F11RQ9Y624 299 aaKnown RBP9.51□□□□□ -0.89
VTI1A-205ENST00000483122 PCNX2A6NKB5 2137 aa9.5□□□□□ -0.89
VTI1A-205ENST00000483122 IGKV1D-17A0A075B6S4 117 aa9.5□□□□□ -0.89
VTI1A-205ENST00000483122 IGHV3OR15-7A0A075B7D8 119 aa9.5□□□□□ -0.89
VTI1A-205ENST00000483122 FBLL1A6NHQ2 334 aaKnown RBP9.5□□□□□ -0.89
VTI1A-205ENST00000483122 OVOL3O00110 214 aa9.5□□□□□ -0.89
VTI1A-205ENST00000483122 FCGR2BP31994 310 aaPredicted RBP9.5□□□□□ -0.89
VTI1A-205ENST00000483122 PDPNQ86YL7 162 aa9.5□□□□□ -0.89
VTI1A-205ENST00000483122 DAZAP1Q96EP5 407 aaKnown RBP9.5□□□□□ -0.89
VTI1A-205ENST00000483122 ZNF492Q9P255 531 aa9.5□□□□□ -0.89
VTI1A-205ENST00000483122 PRR14LQ5THK1 2151 aa9.5□□□□□ -0.89
VTI1A-205ENST00000483122 HAX1O00165 279 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms