RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 RPP30P78346 268 aaKnown RBP10.3□□□□□ -0.76
VARS-225ENST00000482996 DHRS2Q13268 280 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 WFDC3Q8IUB2 231 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 KIR2DL5AQ8N109 375 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 LILRB2Q8N423 598 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 STPG3Q8N7X2 389 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 KIR2DL5BQ8NHK3 375 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 IL17DQ8TAD2 202 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 SLC35E1Q96K37 410 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 CIB3Q96Q77 187 aaPredicted RBP10.3□□□□□ -0.76
VARS-225ENST00000482996 MS4A6AQ9H2W1 248 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 C9orf170A2RU37 121 aa10.29□□□□□ -0.76
VARS-225ENST00000482996 HNRNPCP07910 306 aaKnown RBP eCLIP10.29□□□□□ -0.76
VARS-225ENST00000482996 RD3LP0DJH9 198 aa10.29□□□□□ -0.76
VARS-225ENST00000482996 RPL35AP18077 110 aaKnown RBP10.29□□□□□ -0.76
VARS-225ENST00000482996 P2RY1P47900 373 aa10.29□□□□□ -0.76
VARS-225ENST00000482996 RRAS2P62070 204 aaPredicted RBP10.29□□□□□ -0.76
VARS-225ENST00000482996 GGNBP1Q5YKI7 109 aa10.29□□□□□ -0.76
VARS-225ENST00000482996 ZFAND6Q6FIF0 208 aa10.29□□□□□ -0.76
VARS-225ENST00000482996 Q6ZWC4 215 aa10.29□□□□□ -0.76
VARS-225ENST00000482996 APRG1Q8IVJ8 170 aa10.29□□□□□ -0.76
VARS-225ENST00000482996 C12orf45Q8N5I9 185 aaPredicted RBP10.29□□□□□ -0.76
VARS-225ENST00000482996 MAP6D1Q9H9H5 199 aa10.29□□□□□ -0.76
VARS-225ENST00000482996 RABAC1Q9UI14 185 aa10.29□□□□□ -0.76
VARS-225ENST00000482996 PAIP2BQ9ULR5 123 aaKnown RBP10.29□□□□□ -0.76
VARS-225ENST00000482996 HELTA6NFD8 242 aa10.28□□□□□ -0.76
VARS-225ENST00000482996 SYNGR2O43760 224 aa10.28□□□□□ -0.76
VARS-225ENST00000482996 TOMM40O96008 361 aa10.28□□□□□ -0.76
VARS-225ENST00000482996 IFNA21P01568 189 aa10.28□□□□□ -0.76
VARS-225ENST00000482996 IL4P05112 153 aa10.28□□□□□ -0.76
VARS-225ENST00000482996 AKAP14Q86UN6 197 aa10.28□□□□□ -0.76
VARS-225ENST00000482996 STXBP6Q8NFX7 210 aa10.28□□□□□ -0.76
VARS-225ENST00000482996 OVOL2Q9BRP0 275 aa10.28□□□□□ -0.76
VARS-225ENST00000482996 TP53TG1Q9Y2A0 90 aa10.28□□□□□ -0.76
VARS-225ENST00000482996 ZFP92A6NM28 416 aa10.27□□□□□ -0.77
VARS-225ENST00000482996 SPRY2O43597 315 aa10.27□□□□□ -0.77
VARS-225ENST00000482996 FABP1P07148 127 aa10.27□□□□□ -0.77
VARS-225ENST00000482996 MAGT1Q9H0U3 335 aa10.27□□□□□ -0.77
VARS-225ENST00000482996 MGAT4CQ9UBM8 478 aa10.27□□□□□ -0.77
VARS-225ENST00000482996 PFDN2Q9UHV9 154 aa10.27□□□□□ -0.77
VARS-225ENST00000482996 U3KQE9 123 aa10.27□□□□□ -0.77
VARS-225ENST00000482996 DYNC2H1Q8NCM8 4307 aaKnown RBP10.26□□□□□ -0.77
VARS-225ENST00000482996 WRBO00258 174 aa10.26□□□□□ -0.77
VARS-225ENST00000482996 PSG1P11464 419 aa10.26□□□□□ -0.77
VARS-225ENST00000482996 NUP62P37198 522 aaPredicted RBP10.26□□□□□ -0.77
VARS-225ENST00000482996 AP2S1P53680 142 aaPredicted RBP10.26□□□□□ -0.77
VARS-225ENST00000482996 DEFB131AP59861 70 aa10.26□□□□□ -0.77
VARS-225ENST00000482996 GAMTQ14353 236 aa10.26□□□□□ -0.77
VARS-225ENST00000482996 USF2Q15853 346 aaPredicted RBP10.26□□□□□ -0.77
VARS-225ENST00000482996 ZNF124Q15973 351 aa10.26□□□□□ -0.77
VARS-225ENST00000482996 DEFB135Q30KP9 77 aa10.26□□□□□ -0.77
VARS-225ENST00000482996 OR51G1Q8NGK1 321 aa10.26□□□□□ -0.77
VARS-225ENST00000482996 CSTL1Q9H114 145 aa10.26□□□□□ -0.77
VARS-225ENST00000482996 TENM2Q9NT68 2774 aa10.26□□□□□ -0.77
VARS-225ENST00000482996 MPTX1A8MV57 137 aa10.25□□□□□ -0.77
VARS-225ENST00000482996 FAM25EA8MYX2 175 aa10.25□□□□□ -0.77
VARS-225ENST00000482996 GOSR2O14653 212 aa10.25□□□□□ -0.77
VARS-225ENST00000482996 ADAP1O75689 374 aa10.25□□□□□ -0.77
VARS-225ENST00000482996 CCNKO75909 580 aa10.25□□□□□ -0.77
VARS-225ENST00000482996 C16orf54Q6UWD8 224 aa10.25□□□□□ -0.77
VARS-225ENST00000482996 MITD1Q8WV92 249 aa10.25□□□□□ -0.77
VARS-225ENST00000482996 RNF125Q96EQ8 232 aa10.25□□□□□ -0.77
VARS-225ENST00000482996 STRAPQ9Y3F4 350 aaKnown RBP10.25□□□□□ -0.77
VARS-225ENST00000482996 C5orf51A6NDU8 294 aa10.24□□□□□ -0.77
VARS-225ENST00000482996 K7EQG2 157 aa10.24□□□□□ -0.77
VARS-225ENST00000482996 NKX2-1P43699 371 aaPredicted RBP10.24□□□□□ -0.77
VARS-225ENST00000482996 FCN2Q15485 313 aa10.24□□□□□ -0.77
VARS-225ENST00000482996 SPANXN5Q5MJ07 72 aa10.24□□□□□ -0.77
VARS-225ENST00000482996 LEMD1Q68G75 181 aa10.24□□□□□ -0.77
VARS-225ENST00000482996 OR8G2PQ6IF36 304 aa10.24□□□□□ -0.77
VARS-225ENST00000482996 GSG1LQ6UXU4 331 aa10.24□□□□□ -0.77
VARS-225ENST00000482996 FAM24BQ8N5W8 94 aa10.24□□□□□ -0.77
VARS-225ENST00000482996 GLMPQ8WWB7 406 aa10.24□□□□□ -0.77
VARS-225ENST00000482996 RNF183Q96D59 192 aa10.24□□□□□ -0.77
VARS-225ENST00000482996 PBDC1Q9BVG4 233 aa10.24□□□□□ -0.77
VARS-225ENST00000482996 CSMD3Q7Z407 3707 aa10.24□□□□□ -0.77
VARS-225ENST00000482996 POLR2GP62487 172 aaKnown RBP eCLIP10.23□□□□□ -0.77
VARS-225ENST00000482996 ID3Q02535 119 aa10.23□□□□□ -0.77
VARS-225ENST00000482996 ZNF90Q03938 601 aa10.23□□□□□ -0.77
VARS-225ENST00000482996 STHQ8IWL8 128 aa10.23□□□□□ -0.77
VARS-225ENST00000482996 DCANP1Q8TF63 244 aa10.23□□□□□ -0.77
VARS-225ENST00000482996 TRGV9Q99603 122 aa10.23□□□□□ -0.77
VARS-225ENST00000482996 IGKV1D-37A0A075B6S9 117 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 H3BP45 60 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 BUB3O43684 328 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 CFDP00746 253 aaPredicted RBP10.22□□□□□ -0.77
VARS-225ENST00000482996 ZNF688P0C7X2 276 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 LYZP61626 148 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 OR2F1Q13607 317 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 IAH1Q2TAA2 248 aaPredicted RBP10.22□□□□□ -0.77
VARS-225ENST00000482996 SIGLEC15Q6ZMC9 328 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 THAP8Q8NA92 274 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 OR4D5Q8NGN0 318 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 GATAD1Q8WUU5 269 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 CHAC2Q8WUX2 184 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 ASB13Q8WXK3 278 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 PSENENQ9NZ42 101 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 STARD9Q9P2P6 4700 aa10.22□□□□□ -0.77
VARS-225ENST00000482996 SSSCA1O60232 199 aa10.21□□□□□ -0.77
VARS-225ENST00000482996 CA1P00915 261 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms