RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 CEMP1Q6PRD7 247 aaPredicted RBP7.65□□□□□ -1.18
CPSF4-212ENST00000482251 TRPT1Q86TN4 253 aaKnown RBP7.65□□□□□ -1.18
CPSF4-212ENST00000482251 NOXA1Q86UR1 476 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 CENPSQ8N2Z9 138 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 RNF125Q96EQ8 232 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 SLC35E1Q96K37 410 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 SRRQ9GZT4 340 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 MAGT1Q9H0U3 335 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 CLEC5AQ9NY25 188 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 CACFD1Q9UGQ2 172 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 U3KQE9 123 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 BIRC6Q9NR09 4857 aa7.64□□□□□ -1.19
CPSF4-212ENST00000482251 IGKV1D-37A0A075B6S9 117 aa7.64□□□□□ -1.19
CPSF4-212ENST00000482251 DUXBA0A1W2PPF3 345 aa7.64□□□□□ -1.19
CPSF4-212ENST00000482251 H3BP45 60 aa7.64□□□□□ -1.19
CPSF4-212ENST00000482251 SFT2D2O95562 160 aa7.64□□□□□ -1.19
CPSF4-212ENST00000482251 INPP1P49441 399 aa7.64□□□□□ -1.19
CPSF4-212ENST00000482251 GAMTQ14353 236 aa7.64□□□□□ -1.19
CPSF4-212ENST00000482251 TRIQKQ629K1 86 aa7.64□□□□□ -1.19
CPSF4-212ENST00000482251 SIGLEC15Q6ZMC9 328 aa7.64□□□□□ -1.19
CPSF4-212ENST00000482251 PHLDA1Q8WV24 401 aaPredicted RBP7.64□□□□□ -1.19
CPSF4-212ENST00000482251 FAM90A26D6RGX4 464 aa7.63□□□□□ -1.19
CPSF4-212ENST00000482251 WRBO00258 174 aa7.63□□□□□ -1.19
CPSF4-212ENST00000482251 BUB3O43684 328 aa7.63□□□□□ -1.19
CPSF4-212ENST00000482251 PITX3O75364 302 aa7.63□□□□□ -1.19
CPSF4-212ENST00000482251 ADAP1O75689 374 aa7.63□□□□□ -1.19
CPSF4-212ENST00000482251 GIG44P09565 113 aaPredicted RBP7.63□□□□□ -1.19
CPSF4-212ENST00000482251 DEFB1P60022 68 aa7.63□□□□□ -1.19
CPSF4-212ENST00000482251 BAK1Q16611 211 aa7.63□□□□□ -1.19
CPSF4-212ENST00000482251 GGNBP1Q5YKI7 109 aa7.63□□□□□ -1.19
CPSF4-212ENST00000482251 C11orf45Q8TAV5 145 aa7.63□□□□□ -1.19
CPSF4-212ENST00000482251 SLC25A21Q9BQT8 299 aaPredicted RBP7.63□□□□□ -1.19
CPSF4-212ENST00000482251 C11orf68Q9H3H3 251 aaKnown RBP7.63□□□□□ -1.19
CPSF4-212ENST00000482251 NRN1Q9NPD7 142 aa7.63□□□□□ -1.19
CPSF4-212ENST00000482251 FLVCR2Q9UPI3 526 aa7.63□□□□□ -1.19
CPSF4-212ENST00000482251 KLK5Q9Y337 293 aaPredicted RBP7.63□□□□□ -1.19
CPSF4-212ENST00000482251 IGHV4-28A0A0C4DH34 117 aa7.62□□□□□ -1.19
CPSF4-212ENST00000482251 SPP1P10451 314 aa7.62□□□□□ -1.19
CPSF4-212ENST00000482251 ATF4P18848 351 aaPredicted RBP7.62□□□□□ -1.19
CPSF4-212ENST00000482251 SNRPD3P62318 126 aaKnown RBP7.62□□□□□ -1.19
CPSF4-212ENST00000482251 RAB11AP62491 216 aa7.62□□□□□ -1.19
CPSF4-212ENST00000482251 SPANXN5Q5MJ07 72 aa7.62□□□□□ -1.19
CPSF4-212ENST00000482251 LRTM2Q8N967 370 aa7.62□□□□□ -1.19
CPSF4-212ENST00000482251 Q8NAQ8 132 aa7.62□□□□□ -1.19
CPSF4-212ENST00000482251 PPP1R14BQ96C90 147 aa7.62□□□□□ -1.19
CPSF4-212ENST00000482251 RAB40CQ96S21 281 aa7.62□□□□□ -1.19
CPSF4-212ENST00000482251 TMED3Q9Y3Q3 217 aa7.62□□□□□ -1.19
CPSF4-212ENST00000482251 IGKV1OR2-108A0A075B7D4 117 aa7.61□□□□□ -1.19
CPSF4-212ENST00000482251 PIGBOS1A0A0B4J2F0 54 aa7.61□□□□□ -1.19
CPSF4-212ENST00000482251 SYNGR2O43760 224 aa7.61□□□□□ -1.19
CPSF4-212ENST00000482251 MED6O75586 246 aa7.61□□□□□ -1.19
CPSF4-212ENST00000482251 IGKV3-20P01619 116 aa7.61□□□□□ -1.19
CPSF4-212ENST00000482251 ANXA7P20073 488 aaKnown RBP7.61□□□□□ -1.19
CPSF4-212ENST00000482251 GPX4P36969 197 aaPredicted RBP7.61□□□□□ -1.19
CPSF4-212ENST00000482251 AP2S1P53680 142 aaPredicted RBP7.61□□□□□ -1.19
CPSF4-212ENST00000482251 FXYD7P58549 80 aa7.61□□□□□ -1.19
CPSF4-212ENST00000482251 AKR1C1Q04828 323 aa7.61□□□□□ -1.19
CPSF4-212ENST00000482251 MORN3Q6PF18 240 aaPredicted RBP7.61□□□□□ -1.19
CPSF4-212ENST00000482251 SDHCQ99643 169 aaPredicted RBP7.61□□□□□ -1.19
CPSF4-212ENST00000482251 WDR12Q9GZL7 423 aaKnown RBP7.61□□□□□ -1.19
CPSF4-212ENST00000482251 C9orf170A2RU37 121 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 SMCO3A2RU48 225 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 PRSS46E5RG02 174 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 ZNF701M0R085 212 aaPredicted RBP7.6□□□□□ -1.19
CPSF4-212ENST00000482251 SSSCA1O60232 199 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 DEDDO75618 318 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 NDUFB6O95139 128 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 SCGB1D2O95969 90 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 RBMY1A1P0DJD3 496 aaKnown RBP7.6□□□□□ -1.19
CPSF4-212ENST00000482251 RBMY1CP0DJD4 496 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 SLC25A6P12236 298 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 GATA2P23769 480 aaPredicted RBP7.6□□□□□ -1.19
CPSF4-212ENST00000482251 BTCP35070 178 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 UBE2MP61081 183 aaKnown RBP7.6□□□□□ -1.19
CPSF4-212ENST00000482251 POLR2GP62487 172 aaKnown RBP eCLIP7.6□□□□□ -1.19
CPSF4-212ENST00000482251 RBMY1FQ15415 496 aaKnown RBP7.6□□□□□ -1.19
CPSF4-212ENST00000482251 GDF5OSQ5U4N7 250 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 OR8G2PQ6IF36 304 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 ACOT7LQ6ZUV0 252 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 COQ8AQ8NI60 647 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 DEDD2Q8WXF8 326 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 LINC00052Q96N35 136 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 CIB3Q96Q77 187 aaPredicted RBP7.6□□□□□ -1.19
CPSF4-212ENST00000482251 TRGV9Q99603 122 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 MFFQ9GZY8 342 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 SLC25A22Q9H936 323 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 XCL2Q9UBD3 114 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 X6R8D5 127 aa7.6□□□□□ -1.19
CPSF4-212ENST00000482251 SNRPGP15A8MWD9 76 aa7.59□□□□□ -1.19
CPSF4-212ENST00000482251 H3BMM0 161 aa7.59□□□□□ -1.19
CPSF4-212ENST00000482251 FABP1P07148 127 aa7.59□□□□□ -1.19
CPSF4-212ENST00000482251 OR4E1P0C645 316 aa7.59□□□□□ -1.19
CPSF4-212ENST00000482251 NUP62P37198 522 aaPredicted RBP7.59□□□□□ -1.19
CPSF4-212ENST00000482251 ATP5IP56385 69 aaPredicted RBP7.59□□□□□ -1.19
CPSF4-212ENST00000482251 RPP30P78346 268 aaKnown RBP7.59□□□□□ -1.19
CPSF4-212ENST00000482251 C4orf46Q504U0 113 aa7.59□□□□□ -1.19
CPSF4-212ENST00000482251 ZNF767PQ75MW2 155 aa7.59□□□□□ -1.19
CPSF4-212ENST00000482251 RPP25LQ8N5L8 163 aaKnown RBP7.59□□□□□ -1.19
CPSF4-212ENST00000482251 THAP8Q8NA92 274 aa7.59□□□□□ -1.19
CPSF4-212ENST00000482251 DOK5Q9P104 306 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms