RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 BTNL8Q6UX41 500 aa14.91□□□□□ -0.02
LIME1-205ENST00000480139 METTL26Q96S19 204 aa14.91□□□□□ -0.02
LIME1-205ENST00000480139 TRAV25A0A0B4J276 109 aa14.9□□□□□ -0.02
LIME1-205ENST00000480139 WI2-2373I1.2A0A1W2PRP0 233 aa14.9□□□□□ -0.02
LIME1-205ENST00000480139 SMCO3A2RU48 225 aa14.9□□□□□ -0.02
LIME1-205ENST00000480139 CFDP00746 253 aaPredicted RBP14.9□□□□□ -0.02
LIME1-205ENST00000480139 IL4P05112 153 aa14.9□□□□□ -0.02
LIME1-205ENST00000480139 CRYBB3P26998 211 aa14.9□□□□□ -0.02
LIME1-205ENST00000480139 BAXQ07812 192 aa14.9□□□□□ -0.02
LIME1-205ENST00000480139 VWC2Q2TAL6 325 aa14.9□□□□□ -0.02
LIME1-205ENST00000480139 SORL1Q92673 2214 aa14.9□□□□□ -0.02
LIME1-205ENST00000480139 CHEK1O14757 476 aa14.89□□□□□ -0.03
LIME1-205ENST00000480139 GP9P14770 177 aa14.89□□□□□ -0.03
LIME1-205ENST00000480139 NPPCP23582 126 aa14.89□□□□□ -0.03
LIME1-205ENST00000480139 RAP2BP61225 183 aa14.89□□□□□ -0.03
LIME1-205ENST00000480139 EWSR1Q01844 656 aaKnown RBP eCLIP14.89□□□□□ -0.03
LIME1-205ENST00000480139 FGL1Q08830 312 aa14.89□□□□□ -0.03
LIME1-205ENST00000480139 ATP6V1FQ16864 119 aa14.89□□□□□ -0.03
LIME1-205ENST00000480139 TEPPQ6URK8 271 aa14.89□□□□□ -0.03
LIME1-205ENST00000480139 TMEM217Q8N7C4 229 aa14.89□□□□□ -0.03
LIME1-205ENST00000480139 RNF125Q96EQ8 232 aa14.89□□□□□ -0.03
LIME1-205ENST00000480139 RHPN1-AS1Q9BWJ2 59 aa14.89□□□□□ -0.03
LIME1-205ENST00000480139 VSIRQ9H7M9 311 aa14.89□□□□□ -0.03
LIME1-205ENST00000480139 MBD2Q9UBB5 411 aa14.89□□□□□ -0.03
LIME1-205ENST00000480139 LSM4Q9Y4Z0 139 aaKnown RBP14.89□□□□□ -0.03
LIME1-205ENST00000480139 A0A1W2PS18 150 aa14.88□□□□□ -0.03
LIME1-205ENST00000480139 IZUMO1RA6ND01 250 aa14.88□□□□□ -0.03
LIME1-205ENST00000480139 CD5P06127 495 aa14.88□□□□□ -0.03
LIME1-205ENST00000480139 SELENOTP62341 195 aa14.88□□□□□ -0.03
LIME1-205ENST00000480139 USF2Q15853 346 aaPredicted RBP14.88□□□□□ -0.03
LIME1-205ENST00000480139 TMEM61Q8N0U2 210 aa14.88□□□□□ -0.03
LIME1-205ENST00000480139 LILRB2Q8N423 598 aa14.88□□□□□ -0.03
LIME1-205ENST00000480139 TMEM231Q9H6L2 316 aa14.88□□□□□ -0.03
LIME1-205ENST00000480139 UQCC1Q9NVA1 299 aa14.88□□□□□ -0.03
LIME1-205ENST00000480139 U3KQE9 123 aa14.88□□□□□ -0.03
LIME1-205ENST00000480139 PRB2P02812 416 aaPredicted RBP14.87□□□□□ -0.03
LIME1-205ENST00000480139 LAMTOR1Q6IAA8 161 aa14.87□□□□□ -0.03
LIME1-205ENST00000480139 CYP2G1PQ6ZSU1 146 aa14.87□□□□□ -0.03
LIME1-205ENST00000480139 BPIFCQ8NFQ6 507 aa14.87□□□□□ -0.03
LIME1-205ENST00000480139 THAP6Q8TBB0 222 aa14.87□□□□□ -0.03
LIME1-205ENST00000480139 NARS2Q96I59 477 aaKnown RBP14.87□□□□□ -0.03
LIME1-205ENST00000480139 TMEM147Q9BVK8 224 aa14.87□□□□□ -0.03
LIME1-205ENST00000480139 TSPAN4O14817 238 aa14.86□□□□□ -0.03
LIME1-205ENST00000480139 APOHP02749 345 aaPredicted RBP14.86□□□□□ -0.03
LIME1-205ENST00000480139 HNRNPCP07910 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
LIME1-205ENST00000480139 NUP62P37198 522 aaPredicted RBP14.86□□□□□ -0.03
LIME1-205ENST00000480139 NHLH2Q02577 135 aa14.86□□□□□ -0.03
LIME1-205ENST00000480139 RBPMS2Q6ZRY4 209 aaKnown RBP14.86□□□□□ -0.03
LIME1-205ENST00000480139 ST8SIA2Q92186 375 aa14.86□□□□□ -0.03
LIME1-205ENST00000480139 PRR25Q96S07 402 aa14.86□□□□□ -0.03
LIME1-205ENST00000480139 RNF2Q99496 336 aa14.86□□□□□ -0.03
LIME1-205ENST00000480139 RABAC1Q9UI14 185 aa14.86□□□□□ -0.03
LIME1-205ENST00000480139 ZNF785A8K8V0 405 aa14.85□□□□□ -0.03
LIME1-205ENST00000480139 EIF2B2P49770 351 aaKnown RBP14.85□□□□□ -0.03
LIME1-205ENST00000480139 OR2F1Q13607 317 aa14.85□□□□□ -0.03
LIME1-205ENST00000480139 OR5C1Q8NGR4 320 aa14.85□□□□□ -0.03
LIME1-205ENST00000480139 PFDN2Q9UHV9 154 aa14.85□□□□□ -0.03
LIME1-205ENST00000480139 SLC45A2Q9UMX9 530 aa14.85□□□□□ -0.03
LIME1-205ENST00000480139 WDR83OSQ9Y284 106 aa14.85□□□□□ -0.03
LIME1-205ENST00000480139 IGHV3-49A0A0A0MS15 119 aa14.84□□□□□ -0.03
LIME1-205ENST00000480139 K7EIL1 84 aa14.84□□□□□ -0.03
LIME1-205ENST00000480139 RPL12P30050 165 aaKnown RBP14.84□□□□□ -0.03
LIME1-205ENST00000480139 LYZP61626 148 aa14.84□□□□□ -0.03
LIME1-205ENST00000480139 RAB31Q13636 194 aa14.84□□□□□ -0.03
LIME1-205ENST00000480139 FAM90A2PQ658T7 463 aa14.84□□□□□ -0.03
LIME1-205ENST00000480139 TMEM182Q6ZP80 229 aaPredicted RBP14.84□□□□□ -0.03
LIME1-205ENST00000480139 ZNF546Q86UE3 836 aa14.84□□□□□ -0.03
LIME1-205ENST00000480139 GRAMD2BQ96HH9 432 aa14.84□□□□□ -0.03
LIME1-205ENST00000480139 SPAG8Q99932 426 aaPredicted RBP14.84□□□□□ -0.03
LIME1-205ENST00000480139 PBDC1Q9BVG4 233 aa14.84□□□□□ -0.03
LIME1-205ENST00000480139 HSPB11Q9Y547 144 aa14.84□□□□□ -0.03
LIME1-205ENST00000480139 IGHV3OR16-13A0A075B7E8 117 aa14.83□□□□□ -0.04
LIME1-205ENST00000480139 IGHV3-74A0A0B4J1X5 117 aa14.83□□□□□ -0.04
LIME1-205ENST00000480139 AGPAT2O15120 278 aa14.83□□□□□ -0.04
LIME1-205ENST00000480139 PLP1P60201 277 aa14.83□□□□□ -0.04
LIME1-205ENST00000480139 Q6ZNX1 250 aa14.83□□□□□ -0.04
LIME1-205ENST00000480139 CHAC2Q8WUX2 184 aa14.83□□□□□ -0.04
LIME1-205ENST00000480139 MGST2Q99735 147 aa14.83□□□□□ -0.04
LIME1-205ENST00000480139 UBE2L5PA0A1B0GUS4 154 aa14.82□□□□□ -0.04
LIME1-205ENST00000480139 BUB3O43684 328 aa14.82□□□□□ -0.04
LIME1-205ENST00000480139 MPDU1O75352 247 aa14.82□□□□□ -0.04
LIME1-205ENST00000480139 GATA2P23769 480 aaPredicted RBP14.82□□□□□ -0.04
LIME1-205ENST00000480139 GUCA2BQ16661 112 aa14.82□□□□□ -0.04
LIME1-205ENST00000480139 PXDC1Q5TGL8 231 aa14.82□□□□□ -0.04
LIME1-205ENST00000480139 GTSCR1Q86UQ5 136 aa14.82□□□□□ -0.04
LIME1-205ENST00000480139 OR2T35Q8NGX2 323 aa14.82□□□□□ -0.04
LIME1-205ENST00000480139 SELENOKQ9Y6D0 94 aa14.82□□□□□ -0.04
LIME1-205ENST00000480139 LINC00869P0C866 280 aa14.81□□□□□ -0.04
LIME1-205ENST00000480139 S100A7P31151 101 aa14.81□□□□□ -0.04
LIME1-205ENST00000480139 CAMLGP49069 296 aa14.81□□□□□ -0.04
LIME1-205ENST00000480139 C16orf54Q6UWD8 224 aa14.81□□□□□ -0.04
LIME1-205ENST00000480139 TCF24Q7RTU0 167 aa14.81□□□□□ -0.04
LIME1-205ENST00000480139 MRAPQ8TCY5 172 aa14.81□□□□□ -0.04
LIME1-205ENST00000480139 GLMPQ8WWB7 406 aa14.81□□□□□ -0.04
LIME1-205ENST00000480139 AQP10Q96PS8 301 aa14.81□□□□□ -0.04
LIME1-205ENST00000480139 IGHV3-66A0A0C4DH42 116 aa14.8□□□□□ -0.04
LIME1-205ENST00000480139 HELTA6NFD8 242 aa14.8□□□□□ -0.04
LIME1-205ENST00000480139 DFFBO76075 338 aa14.8□□□□□ -0.04
LIME1-205ENST00000480139 Q5BKY6 102 aa14.8□□□□□ -0.04
LIME1-205ENST00000480139 C1orf194Q5T5A4 169 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms