RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 IAPPP10997 89 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 HLA-DMBP28068 263 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 YPEL3P61236 119 aaPredicted RBP5.18□□□□□ -1.58
COL17A1-205ENST00000480127 AKR1C1Q04828 323 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 OR2F1Q13607 317 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 SPCS2Q15005 226 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 FAM90A2PQ658T7 463 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 EBLN2Q6P2I7 272 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 PRSS54Q6PEW0 395 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 UBE2DNLQ8IWF7 75 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 OR8I2Q8N0Y5 310 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 LILRB2Q8N423 598 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 TOMM5Q8N4H5 51 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 FAM24BQ8N5W8 94 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 OR51G1Q8NGK1 321 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 MCFD2Q8NI22 146 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 GLYATL2Q8WU03 294 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 RTBDNQ9BSG5 229 aaPredicted RBP5.18□□□□□ -1.58
COL17A1-205ENST00000480127 RBKSQ9H477 322 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 FNDC4Q9H6D8 234 aaPredicted RBP5.18□□□□□ -1.58
COL17A1-205ENST00000480127 SLC25A22Q9H936 323 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 PRR13Q9NZ81 148 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 CCDC59Q9P031 241 aaKnown RBP5.18□□□□□ -1.58
COL17A1-205ENST00000480127 XCL2Q9UBD3 114 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 A0A0B4J2A0 478 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 SNRPGP15A8MWD9 76 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 FAM90A26D6RGX4 464 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 K7EQG2 157 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 TOMM40O96008 361 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 IGKV1-17P01599 117 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 IGLC1P0CG04 106 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 SMIM18P0DKX4 95 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 HTN3P15516 51 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 TCTAP57738 103 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 FXYD7P58549 80 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 FGL1Q08830 312 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 PVRIGQ6DKI7 326 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 S100A7AQ86SG5 101 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 LRRC20Q8TCA0 184 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 IL22RA2Q969J5 263 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 RNF125Q96EQ8 232 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 C16orf92Q96LL3 132 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 CIB3Q96Q77 187 aaPredicted RBP5.17□□□□□ -1.58
COL17A1-205ENST00000480127 RAB40CQ96S21 281 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 SHPKQ9UHJ6 478 aa5.17□□□□□ -1.58
COL17A1-205ENST00000480127 DEFB131BA0A096LNP1 70 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 A0A1B0GVY2 172 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 ANKRD20A5PA0PJZ0 165 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 CTDSPLO15194 276 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 IFNA21P01568 189 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 P0C879 139 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 MED14OSP0DP75 135 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 PSG1P11464 419 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 GALR1P47211 349 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 TMBIM6P55061 237 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 SPANXN2Q5MJ10 180 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 TRIQKQ629K1 86 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 C16orf54Q6UWD8 224 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 Q6ZRM9 215 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 ZNF767PQ75MW2 155 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 LYZL2Q7Z4W2 148 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 TRPT1Q86TN4 253 aaKnown RBP5.16□□□□□ -1.58
COL17A1-205ENST00000480127 LHFPL5Q8TAF8 219 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 BCL7BQ9BQE9 202 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 TMEM147Q9BVK8 224 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 KRTAP3-3Q9BYR6 98 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 KRTAP3-2Q9BYR7 98 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 MIXL1Q9H2W2 232 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 MRPL36Q9P0J6 103 aaKnown RBP5.16□□□□□ -1.58
COL17A1-205ENST00000480127 GPR132Q9UNW8 380 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 GOLT1BQ9Y3E0 138 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 TMEM56-RWDD3S4R434 201 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 ABCA13Q86UQ4 5058 aa5.16□□□□□ -1.58
COL17A1-205ENST00000480127 VPS13DQ5THJ4 4388 aa5.15□□□□□ -1.58
COL17A1-205ENST00000480127 IGHV4-4A0A075B6R2 117 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 TEX48A0A1B0GUV7 120 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 LINC00854A0A1B0GVQ3 168 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 TMEM189A5PLL7 270 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 SCGB1D2O95969 90 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 HOXB5P09067 269 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 SPART-AS1P0CW21 52 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 ORM2P19652 201 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 C4BPBP20851 252 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 ATP5IP56385 69 aaPredicted RBP5.15□□□□□ -1.59
COL17A1-205ENST00000480127 USF2Q15853 346 aaPredicted RBP5.15□□□□□ -1.59
COL17A1-205ENST00000480127 TMEM128Q5BJH2 165 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 NMSQ5H8A3 153 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 SPANXN5Q5MJ07 72 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 SAMD13Q5VXD3 122 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 GGNBP1Q5YKI7 109 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 OR8G2PQ6IF36 304 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 Q6ZTC4 211 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 BPIFCQ8NFQ6 507 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 OR1B1Q8NGR6 318 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 DCANP1Q8TF63 244 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 GLMPQ8WWB7 406 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 NDUFAF3Q9BU61 184 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 KRTAP4-5Q9BYR2 181 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 MAGT1Q9H0U3 335 aa5.15□□□□□ -1.59
COL17A1-205ENST00000480127 HRH4Q9H3N8 390 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms