RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 HSD17B12Q53GQ0 312 aa7.74□□□□□ -1.17
USP11-208ENST00000480104 ZNF818PQ6ZRF7 136 aa7.74□□□□□ -1.17
USP11-208ENST00000480104 OR6F1Q8NGZ6 308 aa7.74□□□□□ -1.17
USP11-208ENST00000480104 TSC22D3Q99576 134 aa7.74□□□□□ -1.17
USP11-208ENST00000480104 PAXXQ9BUH6 204 aa7.74□□□□□ -1.17
USP11-208ENST00000480104 RAB22AQ9UL26 194 aa7.74□□□□□ -1.17
USP11-208ENST00000480104 POMPQ9Y244 141 aa7.74□□□□□ -1.17
USP11-208ENST00000480104 TRAV30A0A087WSZ9 112 aa7.73□□□□□ -1.17
USP11-208ENST00000480104 A0A0B4J293 547 aa7.73□□□□□ -1.17
USP11-208ENST00000480104 PTHLHP12272 177 aa7.73□□□□□ -1.17
USP11-208ENST00000480104 F2RP25116 425 aa7.73□□□□□ -1.17
USP11-208ENST00000480104 FCGR2CP31995 323 aa7.73□□□□□ -1.17
USP11-208ENST00000480104 SNCAP37840 140 aa7.73□□□□□ -1.17
USP11-208ENST00000480104 FXYD4P59646 89 aa7.73□□□□□ -1.17
USP11-208ENST00000480104 HES5Q5TA89 166 aa7.73□□□□□ -1.17
USP11-208ENST00000480104 HACD4Q5VWC8 232 aa7.73□□□□□ -1.17
USP11-208ENST00000480104 OR1S2Q8NGQ3 325 aa7.73□□□□□ -1.17
USP11-208ENST00000480104 SLC7A6OSQ96CW6 309 aaPredicted RBP7.73□□□□□ -1.17
USP11-208ENST00000480104 LINC01600Q96MT4 127 aa7.73□□□□□ -1.17
USP11-208ENST00000480104 TRGV2A0A075B6R0 118 aa7.72□□□□□ -1.17
USP11-208ENST00000480104 CORTO00230 105 aa7.72□□□□□ -1.17
USP11-208ENST00000480104 EI24O14681 340 aa7.72□□□□□ -1.17
USP11-208ENST00000480104 ZNF324O75467 553 aaPredicted RBP7.72□□□□□ -1.17
USP11-208ENST00000480104 WBP4O75554 376 aaKnown RBP7.72□□□□□ -1.17
USP11-208ENST00000480104 DUSP14O95147 198 aaKnown RBP7.72□□□□□ -1.17
USP11-208ENST00000480104 PPYP01298 95 aa7.72□□□□□ -1.17
USP11-208ENST00000480104 RLN1P04808 185 aa7.72□□□□□ -1.17
USP11-208ENST00000480104 OR10J1P30954 320 aa7.72□□□□□ -1.17
USP11-208ENST00000480104 CDKN1BP46527 198 aa7.72□□□□□ -1.17
USP11-208ENST00000480104 ARPC4P59998 168 aa7.72□□□□□ -1.17
USP11-208ENST00000480104 YPEL3P61236 119 aaPredicted RBP7.72□□□□□ -1.17
USP11-208ENST00000480104 NEGR1Q7Z3B1 354 aa7.72□□□□□ -1.17
USP11-208ENST00000480104 NUDCD2Q8WVJ2 157 aa7.72□□□□□ -1.17
USP11-208ENST00000480104 ARGLU1Q9NWB6 273 aaPredicted RBP7.72□□□□□ -1.17
USP11-208ENST00000480104 ANXA10Q9UJ72 324 aa7.72□□□□□ -1.17
USP11-208ENST00000480104 AK6Q9Y3D8 172 aaKnown RBP7.72□□□□□ -1.17
USP11-208ENST00000480104 TMEM235A6NFC5 223 aa7.71□□□□□ -1.18
USP11-208ENST00000480104 RBFOX3A6NFN3 312 aa7.71□□□□□ -1.18
USP11-208ENST00000480104 ERICH4A6NGS2 130 aa7.71□□□□□ -1.18
USP11-208ENST00000480104 SNURFLB1AK76 121 aa7.71□□□□□ -1.18
USP11-208ENST00000480104 IBA57-AS1B1ANH7 110 aa7.71□□□□□ -1.18
USP11-208ENST00000480104 UCHL1P09936 223 aa7.71□□□□□ -1.18
USP11-208ENST00000480104 RNASE2P10153 161 aaKnown RBP7.71□□□□□ -1.18
USP11-208ENST00000480104 HSPE1P61604 102 aaKnown RBP7.71□□□□□ -1.18
USP11-208ENST00000480104 MRPL23Q16540 153 aaKnown RBP7.71□□□□□ -1.18
USP11-208ENST00000480104 TMEM17Q86X19 198 aa7.71□□□□□ -1.18
USP11-208ENST00000480104 TSPAN14Q8NG11 270 aa7.71□□□□□ -1.18
USP11-208ENST00000480104 OR51G1Q8NGK1 321 aa7.71□□□□□ -1.18
USP11-208ENST00000480104 OR4A16Q8NH70 328 aa7.71□□□□□ -1.18
USP11-208ENST00000480104 CENPNQ96H22 339 aaPredicted RBP7.71□□□□□ -1.18
USP11-208ENST00000480104 C16orf92Q96LL3 132 aa7.71□□□□□ -1.18
USP11-208ENST00000480104 CALB2P22676 271 aa7.7□□□□□ -1.18
USP11-208ENST00000480104 NUP62P37198 522 aaPredicted RBP7.7□□□□□ -1.18
USP11-208ENST00000480104 RND2P52198 227 aa7.7□□□□□ -1.18
USP11-208ENST00000480104 OR52E5Q8NH55 327 aa7.7□□□□□ -1.18
USP11-208ENST00000480104 DAPK2Q9UIK4 370 aa7.7□□□□□ -1.18
USP11-208ENST00000480104 AP4S1Q9Y587 144 aa7.7□□□□□ -1.18
USP11-208ENST00000480104 IRGMA1A4Y4 181 aa7.69□□□□□ -1.18
USP11-208ENST00000480104 H7BYZ3 331 aa7.69□□□□□ -1.18
USP11-208ENST00000480104 RD3LP0DJH9 198 aa7.69□□□□□ -1.18
USP11-208ENST00000480104 FCGR1AP12314 374 aa7.69□□□□□ -1.18
USP11-208ENST00000480104 ZNF182P17025 639 aaPredicted RBP7.69□□□□□ -1.18
USP11-208ENST00000480104 RPL5P46777 297 aaKnown RBP7.69□□□□□ -1.18
USP11-208ENST00000480104 HSPA13P48723 471 aa7.69□□□□□ -1.18
USP11-208ENST00000480104 GAMTQ14353 236 aa7.69□□□□□ -1.18
USP11-208ENST00000480104 TDRG1Q3Y452 100 aa7.69□□□□□ -1.18
USP11-208ENST00000480104 PRSS54Q6PEW0 395 aa7.69□□□□□ -1.18
USP11-208ENST00000480104 TMEM80Q96HE8 168 aa7.69□□□□□ -1.18
USP11-208ENST00000480104 PRAF2O60831 178 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 TOMM40O96008 361 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 GYPEP15421 78 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 SUB1P53999 127 aaKnown RBP eCLIP7.68□□□□□ -1.18
USP11-208ENST00000480104 GYS2P54840 703 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 WNT4P56705 351 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 SUPT4H1P63272 117 aaKnown RBP7.68□□□□□ -1.18
USP11-208ENST00000480104 ZNF415Q09FC8 603 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 CDNFQ49AH0 187 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 SAMD13Q5VXD3 122 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 C9orf47Q6ZRZ4 202 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 CCDC28AQ8IWP9 274 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 MS4A15Q8N5U1 240 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 SLC35G3Q8N808 338 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 HSD17B11Q8NBQ5 300 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 PBDC1Q9BVG4 233 aa7.68□□□□□ -1.18
USP11-208ENST00000480104 IGHV3-38A0A0C4DH36 116 aa7.67□□□□□ -1.18
USP11-208ENST00000480104 A0A0J9YXV3 536 aa7.67□□□□□ -1.18
USP11-208ENST00000480104 EFCAB10A6NFE3 127 aa7.67□□□□□ -1.18
USP11-208ENST00000480104 SSX5O60225 188 aa7.67□□□□□ -1.18
USP11-208ENST00000480104 PGLYRP1O75594 196 aaPredicted RBP7.67□□□□□ -1.18
USP11-208ENST00000480104 TNFSF8P32971 234 aa7.67□□□□□ -1.18
USP11-208ENST00000480104 OR10A3P58181 314 aa7.67□□□□□ -1.18
USP11-208ENST00000480104 KRTAP10-8P60410 259 aa7.67□□□□□ -1.18
USP11-208ENST00000480104 RHOBP62745 196 aa7.67□□□□□ -1.18
USP11-208ENST00000480104 DAZ2Q13117 558 aaKnown RBP7.67□□□□□ -1.18
USP11-208ENST00000480104 LINC01556Q5JQF7 62 aa7.67□□□□□ -1.18
USP11-208ENST00000480104 MORN5Q5VZ52 161 aa7.67□□□□□ -1.18
USP11-208ENST00000480104 H2BFWTQ7Z2G1 175 aa7.67□□□□□ -1.18
USP11-208ENST00000480104 IL22RA2Q969J5 263 aa7.67□□□□□ -1.18
USP11-208ENST00000480104 PRO0255Q9UI72 69 aa7.67□□□□□ -1.18
USP11-208ENST00000480104 INS-IGF2F8WCM5 200 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms