RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 TIMM9Q9Y5J7 89 aa9.62□□□□□ -0.87
TRAPPC12-218ENST00000479897 BOLA2-SMG1P6H3BVE0 249 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 PSG1P11464 419 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 C4BPBP20851 252 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 RPL29P47914 159 aaKnown RBP9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 PLP1P60201 277 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 PRR20EP86478 221 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 PRR20CP86479 221 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 PRR20DP86480 221 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 PRR20BP86481 221 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 PRR20AP86496 221 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 ZNF90Q03938 601 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 KLF5Q13887 457 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 RPL7L1Q6DKI1 246 aaKnown RBP9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 C1QL4Q86Z23 238 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 BPIFCQ8NFQ6 507 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 OR51G1Q8NGK1 321 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 STOML3Q8TAV4 291 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 PSMG3Q9BT73 122 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 ARV1Q9H2C2 271 aa9.61□□□□□ -0.87
TRAPPC12-218ENST00000479897 WNK1Q9H4A3 2382 aa9.6□□□□□ -0.87
TRAPPC12-218ENST00000479897 C17orf112F2Z3M2 114 aa9.6□□□□□ -0.87
TRAPPC12-218ENST00000479897 M0QZ24 198 aa9.6□□□□□ -0.87
TRAPPC12-218ENST00000479897 RD3LP0DJH9 198 aa9.6□□□□□ -0.87
TRAPPC12-218ENST00000479897 NKX2-5P52952 324 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC12-218ENST00000479897 ELLP55199 621 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC12-218ENST00000479897 EIF5AP63241 154 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-218ENST00000479897 FAM106AQ4KMX7 169 aa9.6□□□□□ -0.87
TRAPPC12-218ENST00000479897 PXDC1Q5TGL8 231 aa9.6□□□□□ -0.87
TRAPPC12-218ENST00000479897 SCGB1C1Q8TD33 95 aa9.6□□□□□ -0.87
TRAPPC12-218ENST00000479897 Q8WTZ3 238 aa9.6□□□□□ -0.87
TRAPPC12-218ENST00000479897 GINS3Q9BRX5 216 aa9.6□□□□□ -0.87
TRAPPC12-218ENST00000479897 PUS1Q9Y606 427 aaKnown RBP eCLIP9.6□□□□□ -0.87
TRAPPC12-218ENST00000479897 WI2-2373I1.2A0A1W2PRP0 233 aa9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 PF4P02776 101 aa9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 LINC00869P0C866 280 aa9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 SLURP1P55000 103 aa9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 TOMM20LQ6UXN7 152 aa9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 STPG3Q8N7X2 389 aa9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 LINC00482Q8N8I6 264 aa9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 OR2G3Q8NGZ4 309 aa9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 GNPNAT1Q96EK6 184 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 RNF125Q96EQ8 232 aa9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 RCC1LQ96I51 464 aaKnown RBP9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 DUX3Q96PT4 197 aa9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 ZNF471Q9BX82 626 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 PXMP4Q9Y6I8 212 aa9.59□□□□□ -0.87
TRAPPC12-218ENST00000479897 K7EMT4 169 aa9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 IL4P05112 153 aa9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 HNRNPCP07910 306 aaKnown RBP eCLIP9.58□□□□□ -0.881e-6■□□□□ 8.9
TRAPPC12-218ENST00000479897 TPT1P13693 172 aaKnown RBP9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 ATP6V0CP27449 155 aa9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 B2MP61769 119 aa9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 MIC13Q5XKP0 118 aa9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 UNQ9165/PRO28630Q6UXU0 137 aa9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 TMEM182Q6ZP80 229 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 SLC51BQ86UW2 128 aa9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 ZNF709Q8N972 641 aa9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 HSD17B11Q8NBQ5 300 aa9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 SPATA3Q8NHX4 192 aa9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 DLX4Q92988 240 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 RSG1Q9BU20 258 aa9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 DAZ1Q9NQZ3 744 aaKnown RBP9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 SLC39A9Q9NUM3 307 aa9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 UFC1Q9Y3C8 167 aa9.58□□□□□ -0.88
TRAPPC12-218ENST00000479897 IGHV3-35A0A0C4DH35 117 aa9.57□□□□□ -0.88
TRAPPC12-218ENST00000479897 TMEM213A2RRL7 107 aa9.57□□□□□ -0.88
TRAPPC12-218ENST00000479897 TSPAN15O95858 294 aa9.57□□□□□ -0.88
TRAPPC12-218ENST00000479897 SPP1P10451 314 aa9.57□□□□□ -0.88
TRAPPC12-218ENST00000479897 GATA2P23769 480 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC12-218ENST00000479897 SYNJ2BPP57105 145 aa9.57□□□□□ -0.88
TRAPPC12-218ENST00000479897 SERF2P84101 59 aa9.57□□□□□ -0.88
TRAPPC12-218ENST00000479897 USF2Q15853 346 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC12-218ENST00000479897 BAP18Q8IXM2 172 aa9.57□□□□□ -0.88
TRAPPC12-218ENST00000479897 PEMTQ9UBM1 199 aa9.57□□□□□ -0.88
TRAPPC12-218ENST00000479897 OVOL1O14753 267 aa9.56□□□□□ -0.88
TRAPPC12-218ENST00000479897 SEC11BP0C7V7 166 aa9.56□□□□□ -0.88
TRAPPC12-218ENST00000479897 CRYBB3P26998 211 aa9.56□□□□□ -0.88
TRAPPC12-218ENST00000479897 LYZP61626 148 aa9.56□□□□□ -0.88
TRAPPC12-218ENST00000479897 Q6ZRG5 221 aa9.56□□□□□ -0.88
TRAPPC12-218ENST00000479897 OR9G4Q8NGQ1 327 aa9.56□□□□□ -0.88
TRAPPC12-218ENST00000479897 MARC2Q969Z3 335 aa9.56□□□□□ -0.88
TRAPPC12-218ENST00000479897 PFDN5Q99471 154 aa9.56□□□□□ -0.88
TRAPPC12-218ENST00000479897 SIGLEC8Q9NYZ4 499 aa9.56□□□□□ -0.88
TRAPPC12-218ENST00000479897 MRPL27Q9P0M9 148 aaKnown RBP9.56□□□□□ -0.88
TRAPPC12-218ENST00000479897 U3KQE9 123 aa9.56□□□□□ -0.88
TRAPPC12-218ENST00000479897 TRRAPQ9Y4A5 3859 aa9.56□□□□□ -0.88
TRAPPC12-218ENST00000479897 ELOA3CA0A087WX78 387 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC12-218ENST00000479897 YIF1AO95070 293 aa9.55□□□□□ -0.88
TRAPPC12-218ENST00000479897 C8orf88P0DMB2 117 aa9.55□□□□□ -0.88
TRAPPC12-218ENST00000479897 S100A7P31151 101 aa9.55□□□□□ -0.88
TRAPPC12-218ENST00000479897 S100A7AQ86SG5 101 aa9.55□□□□□ -0.88
TRAPPC12-218ENST00000479897 WFDC9Q8NEX5 89 aa9.55□□□□□ -0.88
TRAPPC12-218ENST00000479897 OR1L4Q8NGR5 311 aa9.55□□□□□ -0.88
TRAPPC12-218ENST00000479897 GATAD1Q8WUU5 269 aa9.55□□□□□ -0.88
TRAPPC12-218ENST00000479897 ST8SIA2Q92186 375 aa9.55□□□□□ -0.88
TRAPPC12-218ENST00000479897 METTL26Q96S19 204 aa9.55□□□□□ -0.88
TRAPPC12-218ENST00000479897 C20orf24Q9BUV8 137 aa9.55□□□□□ -0.88
TRAPPC12-218ENST00000479897 SH3BGRL3Q9H299 93 aa9.55□□□□□ -0.88
TRAPPC12-218ENST00000479897 RABAC1Q9UI14 185 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms