RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ATF4P18848 351 aaPredicted RBP12.61□□□□□ -0.39
ECHDC1-216ENST00000479525 VAMP1P23763 118 aa12.61□□□□□ -0.39
ECHDC1-216ENST00000479525 GDF5OSQ5U4N7 250 aa12.61□□□□□ -0.39
ECHDC1-216ENST00000479525 SIGLEC15Q6ZMC9 328 aa12.61□□□□□ -0.39
ECHDC1-216ENST00000479525 MAGT1Q9H0U3 335 aa12.61□□□□□ -0.39
ECHDC1-216ENST00000479525 SHPKQ9UHJ6 478 aa12.61□□□□□ -0.39
ECHDC1-216ENST00000479525 V9GYH0 126 aa12.61□□□□□ -0.39
ECHDC1-216ENST00000479525 X6R8D5 127 aa12.61□□□□□ -0.39
ECHDC1-216ENST00000479525 IGKV1D-37A0A075B6S9 117 aa12.6□□□□□ -0.39
ECHDC1-216ENST00000479525 ELOA3CA0A087WX78 387 aaPredicted RBP12.6□□□□□ -0.39
ECHDC1-216ENST00000479525 FAM90A26D6RGX4 464 aa12.6□□□□□ -0.39
ECHDC1-216ENST00000479525 PRR20EP86478 221 aa12.6□□□□□ -0.39
ECHDC1-216ENST00000479525 PRR20CP86479 221 aa12.6□□□□□ -0.39
ECHDC1-216ENST00000479525 PRR20DP86480 221 aa12.6□□□□□ -0.39
ECHDC1-216ENST00000479525 PRR20BP86481 221 aa12.6□□□□□ -0.39
ECHDC1-216ENST00000479525 PRR20AP86496 221 aa12.6□□□□□ -0.39
ECHDC1-216ENST00000479525 ZNF79Q15937 498 aa12.6□□□□□ -0.39
ECHDC1-216ENST00000479525 ETFRF1Q6IPR1 90 aa12.6□□□□□ -0.39
ECHDC1-216ENST00000479525 BCL7BQ9BQE9 202 aa12.6□□□□□ -0.39
ECHDC1-216ENST00000479525 XCL2Q9UBD3 114 aa12.6□□□□□ -0.39
ECHDC1-216ENST00000479525 CELA1Q9UNI1 258 aa12.6□□□□□ -0.39
ECHDC1-216ENST00000479525 ZFP92A6NM28 416 aa12.59□□□□□ -0.39
ECHDC1-216ENST00000479525 IGLL5B9A064 214 aa12.59□□□□□ -0.39
ECHDC1-216ENST00000479525 BUB3O43684 328 aa12.59□□□□□ -0.39
ECHDC1-216ENST00000479525 LYZP61626 148 aa12.59□□□□□ -0.39
ECHDC1-216ENST00000479525 GAMTQ14353 236 aa12.59□□□□□ -0.39
ECHDC1-216ENST00000479525 TOMM5Q8N4H5 51 aa12.59□□□□□ -0.39
ECHDC1-216ENST00000479525 RNF125Q96EQ8 232 aa12.59□□□□□ -0.39
ECHDC1-216ENST00000479525 SCGB3A2Q96PL1 93 aa12.59□□□□□ -0.39
ECHDC1-216ENST00000479525 WDR12Q9GZL7 423 aaKnown RBP12.59□□□□□ -0.39
ECHDC1-216ENST00000479525 RABL2AQ9UBK7 228 aaPredicted RBP12.59□□□□□ -0.39
ECHDC1-216ENST00000479525 RABL2BQ9UNT1 228 aa12.59□□□□□ -0.39
ECHDC1-216ENST00000479525 ANXA3P12429 323 aa12.58□□□□□ -0.4
ECHDC1-216ENST00000479525 Q6ZTC4 211 aa12.58□□□□□ -0.4
ECHDC1-216ENST00000479525 MFFQ9GZY8 342 aa12.58□□□□□ -0.4
ECHDC1-216ENST00000479525 NRN1Q9NPD7 142 aa12.58□□□□□ -0.4
ECHDC1-216ENST00000479525 U3KQ87 197 aa12.58□□□□□ -0.4
ECHDC1-216ENST00000479525 HOXB5P09067 269 aa12.57□□□□□ -0.4
ECHDC1-216ENST00000479525 SPP1P10451 314 aa12.57□□□□□ -0.4
ECHDC1-216ENST00000479525 HLA-DMBP28068 263 aa12.57□□□□□ -0.4
ECHDC1-216ENST00000479525 EIF2B2P49770 351 aaKnown RBP12.57□□□□□ -0.4
ECHDC1-216ENST00000479525 PPP1R1AQ13522 171 aa12.57□□□□□ -0.4
ECHDC1-216ENST00000479525 CSNK1G2-AS1Q8NCQ2 148 aa12.57□□□□□ -0.4
ECHDC1-216ENST00000479525 SLC35E1Q96K37 410 aa12.57□□□□□ -0.4
ECHDC1-216ENST00000479525 LINC00052Q96N35 136 aa12.57□□□□□ -0.4
ECHDC1-216ENST00000479525 SCRT1Q9BWW7 348 aa12.57□□□□□ -0.4
ECHDC1-216ENST00000479525 H3BP45 60 aa12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 WRBO00258 174 aa12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 MORN3Q6PF18 240 aaPredicted RBP12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 NOXA1Q86UR1 476 aa12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 C2CD4CQ8TF44 421 aa12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 TBC1D24Q9ULP9 559 aa12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 DNAH6Q9C0G6 4158 aa12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 IGHV3OR16-12A0A075B7B8 117 aa12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 IGKV1OR2-108A0A075B7D4 117 aa12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 LINC00854A0A1B0GVQ3 168 aa12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 ZNF705EA8MWA4 302 aaPredicted RBP12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 PITX3O75364 302 aa12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 GATA2P23769 480 aaPredicted RBP12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 FAUP35544 74 aaKnown RBP12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 LGALS9CQ6DKI2 356 aa12.56□□□□□ -0.4
ECHDC1-216ENST00000479525 F6UB75 175 aa12.55□□□□□ -0.4
ECHDC1-216ENST00000479525 H3BMM0 161 aa12.55□□□□□ -0.4
ECHDC1-216ENST00000479525 PRB4P10163 310 aaPredicted RBP12.55□□□□□ -0.4
ECHDC1-216ENST00000479525 AP2S1P53680 142 aaPredicted RBP12.55□□□□□ -0.4
ECHDC1-216ENST00000479525 SNRPD3P62318 126 aaKnown RBP12.55□□□□□ -0.4
ECHDC1-216ENST00000479525 TMEM128Q5BJH2 165 aa12.55□□□□□ -0.4
ECHDC1-216ENST00000479525 PPP1R14BQ96C90 147 aa12.55□□□□□ -0.4
ECHDC1-216ENST00000479525 APLNQ9ULZ1 77 aa12.55□□□□□ -0.4
ECHDC1-216ENST00000479525 SFT2D2O95562 160 aa12.54□□□□□ -0.4
ECHDC1-216ENST00000479525 MIFP14174 115 aa12.54□□□□□ -0.4
ECHDC1-216ENST00000479525 SRPXP78539 464 aa12.54□□□□□ -0.4
ECHDC1-216ENST00000479525 TMEM182Q6ZP80 229 aaPredicted RBP12.54□□□□□ -0.4
ECHDC1-216ENST00000479525 FLVCR2Q9UPI3 526 aa12.54□□□□□ -0.4
ECHDC1-216ENST00000479525 ADAP1O75689 374 aa12.53□□□□□ -0.4
ECHDC1-216ENST00000479525 EMP1P54849 157 aa12.53□□□□□ -0.4
ECHDC1-216ENST00000479525 GGNBP1Q5YKI7 109 aa12.53□□□□□ -0.4
ECHDC1-216ENST00000479525 CCDC190Q86UF4 302 aa12.53□□□□□ -0.4
ECHDC1-216ENST00000479525 SLC25A22Q9H936 323 aa12.53□□□□□ -0.4
ECHDC1-216ENST00000479525 HLA-DRB4P13762 266 aa12.52□□□□□ -0.41
ECHDC1-216ENST00000479525 S100A5P33763 92 aa12.52□□□□□ -0.41
ECHDC1-216ENST00000479525 GPX4P36969 197 aaPredicted RBP12.52□□□□□ -0.41
ECHDC1-216ENST00000479525 AP3S2P59780 193 aa12.52□□□□□ -0.41
ECHDC1-216ENST00000479525 RAB11AP62491 216 aa12.52□□□□□ -0.41
ECHDC1-216ENST00000479525 C12orf74Q32Q52 190 aa12.52□□□□□ -0.41
ECHDC1-216ENST00000479525 SPANXN5Q5MJ07 72 aa12.52□□□□□ -0.41
ECHDC1-216ENST00000479525 CENPSQ8N2Z9 138 aa12.52□□□□□ -0.41
ECHDC1-216ENST00000479525 OR4B1Q8NGF8 309 aa12.52□□□□□ -0.41
ECHDC1-216ENST00000479525 C20orf173Q96LM9 149 aa12.52□□□□□ -0.41
ECHDC1-216ENST00000479525 RBM38Q9H0Z9 239 aaKnown RBP12.52□□□□□ -0.41
ECHDC1-216ENST00000479525 SLC35B3Q9H1N7 401 aa12.52□□□□□ -0.41
ECHDC1-216ENST00000479525 HLA-DRB4X5D2U9 266 aa12.52□□□□□ -0.41
ECHDC1-216ENST00000479525 CCNKO75909 580 aa12.51□□□□□ -0.41
ECHDC1-216ENST00000479525 BAK1Q16611 211 aa12.51□□□□□ -0.41
ECHDC1-216ENST00000479525 IGFL4Q6B9Z1 124 aa12.51□□□□□ -0.41
ECHDC1-216ENST00000479525 COQ8AQ8NI60 647 aa12.51□□□□□ -0.41
ECHDC1-216ENST00000479525 PLA2G2EQ9NZK7 142 aa12.51□□□□□ -0.41
ECHDC1-216ENST00000479525 DOK5Q9P104 306 aa12.51□□□□□ -0.41
ECHDC1-216ENST00000479525 IGHV4-4A0A075B6R2 117 aa12.5□□□□□ -0.41
ECHDC1-216ENST00000479525 DUXBA0A1W2PPF3 345 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms