RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 MS4A6AQ9H2W1 248 aa11.59□□□□□ -0.55
HMGA1-206ENST00000478214 RETNQ9HD89 108 aa11.59□□□□□ -0.55
HMGA1-206ENST00000478214 PSENENQ9NZ42 101 aa11.59□□□□□ -0.55
HMGA1-206ENST00000478214 U3KQE9 123 aa11.59□□□□□ -0.55
HMGA1-206ENST00000478214 FAM25EA8MYX2 175 aa11.58□□□□□ -0.56
HMGA1-206ENST00000478214 P2RY1P47900 373 aa11.58□□□□□ -0.56
HMGA1-206ENST00000478214 PAFAH1B2P68402 229 aa11.58□□□□□ -0.56
HMGA1-206ENST00000478214 OR51G1Q8NGK1 321 aa11.58□□□□□ -0.56
HMGA1-206ENST00000478214 SMIM8Q96KF7 97 aa11.58□□□□□ -0.56
HMGA1-206ENST00000478214 RCL1Q9Y2P8 373 aaKnown RBP11.58□□□□□ -0.56
HMGA1-206ENST00000478214 IGKV1OR2-108A0A075B7D4 117 aa11.57□□□□□ -0.56
HMGA1-206ENST00000478214 LOC102724200A0A096LPH7 203 aaPredicted RBP11.57□□□□□ -0.56
HMGA1-206ENST00000478214 DNASE2O00115 360 aaPredicted RBP11.57□□□□□ -0.56
HMGA1-206ENST00000478214 MBPP02686 304 aaPredicted RBP11.57□□□□□ -0.56
HMGA1-206ENST00000478214 IL5P05113 134 aa11.57□□□□□ -0.56
HMGA1-206ENST00000478214 OR8G2PQ6IF36 304 aa11.57□□□□□ -0.56
HMGA1-206ENST00000478214 APRG1Q8IVJ8 170 aa11.57□□□□□ -0.56
HMGA1-206ENST00000478214 THAP8Q8NA92 274 aa11.57□□□□□ -0.56
HMGA1-206ENST00000478214 RNF125Q96EQ8 232 aa11.57□□□□□ -0.56
HMGA1-206ENST00000478214 GRAMD2BQ96HH9 432 aa11.57□□□□□ -0.56
HMGA1-206ENST00000478214 FAM110AQ9BQ89 295 aa11.57□□□□□ -0.56
HMGA1-206ENST00000478214 PBDC1Q9BVG4 233 aa11.57□□□□□ -0.56
HMGA1-206ENST00000478214 GGTLC1Q9BX51 225 aa11.57□□□□□ -0.56
HMGA1-206ENST00000478214 C5orf51A6NDU8 294 aa11.56□□□□□ -0.56
HMGA1-206ENST00000478214 CCNKO75909 580 aa11.56□□□□□ -0.56
HMGA1-206ENST00000478214 OR2F1Q13607 317 aa11.56□□□□□ -0.56
HMGA1-206ENST00000478214 ZNF124Q15973 351 aa11.56□□□□□ -0.56
HMGA1-206ENST00000478214 C16orf54Q6UWD8 224 aa11.56□□□□□ -0.56
HMGA1-206ENST00000478214 TMEM14EPQ6UXP3 125 aa11.56□□□□□ -0.56
HMGA1-206ENST00000478214 ACOT7LQ6ZUV0 252 aa11.56□□□□□ -0.56
HMGA1-206ENST00000478214 NRARPQ7Z6K4 114 aa11.56□□□□□ -0.56
HMGA1-206ENST00000478214 RAB40CQ96S21 281 aa11.56□□□□□ -0.56
HMGA1-206ENST00000478214 TRGV9Q99603 122 aa11.56□□□□□ -0.56
HMGA1-206ENST00000478214 MAP6D1Q9H9H5 199 aa11.56□□□□□ -0.56
HMGA1-206ENST00000478214 RABAC1Q9UI14 185 aa11.56□□□□□ -0.56
HMGA1-206ENST00000478214 PMS2P5A8MQ11 134 aa11.55□□□□□ -0.56
HMGA1-206ENST00000478214 FABP1P07148 127 aa11.55□□□□□ -0.56
HMGA1-206ENST00000478214 METTL15P1P0C7V9 234 aa11.55□□□□□ -0.56
HMGA1-206ENST00000478214 FAM24BQ8N5W8 94 aa11.55□□□□□ -0.56
HMGA1-206ENST00000478214 STXBP6Q8NFX7 210 aa11.55□□□□□ -0.56
HMGA1-206ENST00000478214 GLMPQ8WWB7 406 aa11.55□□□□□ -0.56
HMGA1-206ENST00000478214 TRAV2A0A0B4J234 112 aa11.54□□□□□ -0.56
HMGA1-206ENST00000478214 SMCO3A2RU48 225 aa11.54□□□□□ -0.56
HMGA1-206ENST00000478214 C7orf66A4D0T2 115 aa11.54□□□□□ -0.56
HMGA1-206ENST00000478214 SNRPGP15A8MWD9 76 aa11.54□□□□□ -0.56
HMGA1-206ENST00000478214 BUB3O43684 328 aa11.54□□□□□ -0.56
HMGA1-206ENST00000478214 TSC22D2O75157 780 aa11.54□□□□□ -0.56
HMGA1-206ENST00000478214 RPL35AP18077 110 aaKnown RBP11.54□□□□□ -0.56
HMGA1-206ENST00000478214 EIF2B2P49770 351 aaKnown RBP11.54□□□□□ -0.56
HMGA1-206ENST00000478214 CMC4P56277 68 aaPredicted RBP11.54□□□□□ -0.56
HMGA1-206ENST00000478214 TAS2R30P59541 319 aa11.54□□□□□ -0.56
HMGA1-206ENST00000478214 LYZP61626 148 aa11.54□□□□□ -0.56
HMGA1-206ENST00000478214 AKR1C1Q04828 323 aa11.54□□□□□ -0.56
HMGA1-206ENST00000478214 C2orf50Q96LR7 162 aa11.54□□□□□ -0.56
HMGA1-206ENST00000478214 LSM5Q9Y4Y9 91 aaKnown RBP11.54□□□□□ -0.56
HMGA1-206ENST00000478214 HELTA6NFD8 242 aa11.53□□□□□ -0.56
HMGA1-206ENST00000478214 INMT-MINDY4F8WBC2 141 aa11.53□□□□□ -0.56
HMGA1-206ENST00000478214 K7EQG2 157 aa11.53□□□□□ -0.56
HMGA1-206ENST00000478214 DEFA1P59665 94 aa11.53□□□□□ -0.56
HMGA1-206ENST00000478214 DEFA3P59666 94 aa11.53□□□□□ -0.56
HMGA1-206ENST00000478214 DEFB131AP59861 70 aa11.53□□□□□ -0.56
HMGA1-206ENST00000478214 RRAS2P62070 204 aaPredicted RBP11.53□□□□□ -0.56
HMGA1-206ENST00000478214 GSG1LQ6UXU4 331 aa11.53□□□□□ -0.56
HMGA1-206ENST00000478214 STPG3Q8N7X2 389 aa11.53□□□□□ -0.56
HMGA1-206ENST00000478214 K7EPK0 472 aa11.52□□□□□ -0.57
HMGA1-206ENST00000478214 L7N2F9 121 aa11.52□□□□□ -0.57
HMGA1-206ENST00000478214 GATA2P23769 480 aaPredicted RBP11.52□□□□□ -0.57
HMGA1-206ENST00000478214 VAMP2P63027 116 aa11.52□□□□□ -0.57
HMGA1-206ENST00000478214 DLK1P80370 383 aa11.52□□□□□ -0.57
HMGA1-206ENST00000478214 ARL16Q0P5N6 197 aa11.52□□□□□ -0.57
HMGA1-206ENST00000478214 TMEM182Q6ZP80 229 aaPredicted RBP11.52□□□□□ -0.57
HMGA1-206ENST00000478214 TMEM144Q7Z5S9 345 aa11.52□□□□□ -0.57
HMGA1-206ENST00000478214 DCANP1Q8TF63 244 aa11.52□□□□□ -0.57
HMGA1-206ENST00000478214 GPN1Q9HCN4 374 aaPredicted RBP11.52□□□□□ -0.57
HMGA1-206ENST00000478214 ZNF688P0C7X2 276 aa11.51□□□□□ -0.57
HMGA1-206ENST00000478214 AP2S1P53680 142 aaPredicted RBP11.51□□□□□ -0.57
HMGA1-206ENST00000478214 APOC4P55056 127 aa11.51□□□□□ -0.57
HMGA1-206ENST00000478214 IL15RAQ13261 267 aa11.51□□□□□ -0.57
HMGA1-206ENST00000478214 LEMD1Q68G75 181 aa11.51□□□□□ -0.57
HMGA1-206ENST00000478214 SIGLEC15Q6ZMC9 328 aa11.51□□□□□ -0.57
HMGA1-206ENST00000478214 OR10P1Q8NGE3 313 aa11.51□□□□□ -0.57
HMGA1-206ENST00000478214 MARVELD1Q9BSK0 173 aa11.51□□□□□ -0.57
HMGA1-206ENST00000478214 C11orf1Q9H5F2 150 aa11.51□□□□□ -0.57
HMGA1-206ENST00000478214 EDA2RQ9HAV5 297 aa11.51□□□□□ -0.57
HMGA1-206ENST00000478214 KIR2DL5BA0A0G2JN68 375 aa11.5□□□□□ -0.57
HMGA1-206ENST00000478214 KIR2DL5BA0A0G2JPC4 375 aa11.5□□□□□ -0.57
HMGA1-206ENST00000478214 PRAF2O60831 178 aa11.5□□□□□ -0.57
HMGA1-206ENST00000478214 CFDP00746 253 aaPredicted RBP11.5□□□□□ -0.57
HMGA1-206ENST00000478214 NUP62P37198 522 aaPredicted RBP11.5□□□□□ -0.57
HMGA1-206ENST00000478214 S100A10P60903 97 aa11.5□□□□□ -0.57
HMGA1-206ENST00000478214 KIR2DL5AQ8N109 375 aa11.5□□□□□ -0.57
HMGA1-206ENST00000478214 BPIFCQ8NFQ6 507 aa11.5□□□□□ -0.57
HMGA1-206ENST00000478214 KIR2DL5BQ8NHK3 375 aa11.5□□□□□ -0.57
HMGA1-206ENST00000478214 PPP1R14BQ96C90 147 aa11.5□□□□□ -0.57
HMGA1-206ENST00000478214 OVOL2Q9BRP0 275 aa11.5□□□□□ -0.57
HMGA1-206ENST00000478214 PFDN2Q9UHV9 154 aa11.5□□□□□ -0.57
HMGA1-206ENST00000478214 GOSR2O14653 212 aa11.49□□□□□ -0.57
HMGA1-206ENST00000478214 SIX6O95475 246 aa11.49□□□□□ -0.57
HMGA1-206ENST00000478214 BCAP31P51572 246 aa11.49□□□□□ -0.57
HMGA1-206ENST00000478214 CAV2P51636 162 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms