RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CYP2G1PQ6ZSU1 146 aa11.68□□□□□ -0.54
SEC13-215ENST00000477547 Q8WTZ3 238 aa11.68□□□□□ -0.54
SEC13-215ENST00000477547 GINS3Q9BRX5 216 aa11.68□□□□□ -0.54
SEC13-215ENST00000477547 DAZ1Q9NQZ3 744 aaKnown RBP11.68□□□□□ -0.54
SEC13-215ENST00000477547 LSM4Q9Y4Z0 139 aaKnown RBP11.68□□□□□ -0.54
SEC13-215ENST00000477547 TMEM213A2RRL7 107 aa11.67□□□□□ -0.54
SEC13-215ENST00000477547 SEC14L6B5MCN3 397 aa11.67□□□□□ -0.54
SEC13-215ENST00000477547 ZNF207O43670 478 aaKnown RBP11.67□□□□□ -0.54
SEC13-215ENST00000477547 IL4P05112 153 aa11.67□□□□□ -0.54
SEC13-215ENST00000477547 PSG1P11464 419 aa11.67□□□□□ -0.54
SEC13-215ENST00000477547 CD300CQ08708 224 aa11.67□□□□□ -0.54
SEC13-215ENST00000477547 BTNL8Q6UX41 500 aa11.67□□□□□ -0.54
SEC13-215ENST00000477547 OR11H4Q8NGC9 324 aa11.67□□□□□ -0.54
SEC13-215ENST00000477547 OR51G1Q8NGK1 321 aa11.67□□□□□ -0.54
SEC13-215ENST00000477547 MGST2Q99735 147 aa11.67□□□□□ -0.54
SEC13-215ENST00000477547 ELOVL1Q9BW60 279 aa11.67□□□□□ -0.54
SEC13-215ENST00000477547 C2orf70A6NJV1 201 aa11.66□□□□□ -0.54
SEC13-215ENST00000477547 AGPAT2O15120 278 aa11.66□□□□□ -0.54
SEC13-215ENST00000477547 SAP30O75446 220 aa11.66□□□□□ -0.54
SEC13-215ENST00000477547 EDN2P20800 178 aa11.66□□□□□ -0.54
SEC13-215ENST00000477547 ELLP55199 621 aaPredicted RBP11.66□□□□□ -0.54
SEC13-215ENST00000477547 LYZP61626 148 aa11.66□□□□□ -0.54
SEC13-215ENST00000477547 RAB31Q13636 194 aa11.66□□□□□ -0.54
SEC13-215ENST00000477547 WFDC9Q8NEX5 89 aa11.66□□□□□ -0.54
SEC13-215ENST00000477547 BPIFCQ8NFQ6 507 aa11.66□□□□□ -0.54
SEC13-215ENST00000477547 RNF125Q96EQ8 232 aa11.66□□□□□ -0.54
SEC13-215ENST00000477547 MCRIP2Q9BUT9 160 aaKnown RBP11.66□□□□□ -0.54
SEC13-215ENST00000477547 PBDC1Q9BVG4 233 aa11.66□□□□□ -0.54
SEC13-215ENST00000477547 GGTLC1Q9BX51 225 aa11.66□□□□□ -0.54
SEC13-215ENST00000477547 MFFQ9GZY8 342 aa11.66□□□□□ -0.54
SEC13-215ENST00000477547 NOTCH3Q9UM47 2321 aa11.66□□□□□ -0.54
SEC13-215ENST00000477547 HMSDA8MTL9 139 aa11.65□□□□□ -0.54
SEC13-215ENST00000477547 MPDU1O75352 247 aa11.65□□□□□ -0.54
SEC13-215ENST00000477547 IFNA5P01569 189 aa11.65□□□□□ -0.54
SEC13-215ENST00000477547 C1QBP02746 253 aa11.65□□□□□ -0.54
SEC13-215ENST00000477547 LINC00869P0C866 280 aa11.65□□□□□ -0.54
SEC13-215ENST00000477547 IGLL1P15814 213 aa11.65□□□□□ -0.54
SEC13-215ENST00000477547 GATA2P23769 480 aaPredicted RBP11.65□□□□□ -0.54
SEC13-215ENST00000477547 CAMLGP49069 296 aa11.65□□□□□ -0.54
SEC13-215ENST00000477547 SELENOTP62341 195 aa11.65□□□□□ -0.54
SEC13-215ENST00000477547 ZNF345Q14585 488 aa11.65□□□□□ -0.54
SEC13-215ENST00000477547 USF2Q15853 346 aaPredicted RBP11.65□□□□□ -0.54
SEC13-215ENST00000477547 TM4SF20Q53R12 229 aa11.65□□□□□ -0.54
SEC13-215ENST00000477547 DYNLRB2Q8TF09 96 aa11.65□□□□□ -0.54
SEC13-215ENST00000477547 WDR61Q9GZS3 305 aaKnown RBP11.65□□□□□ -0.54
SEC13-215ENST00000477547 WFDC1Q9HC57 220 aa11.65□□□□□ -0.54
SEC13-215ENST00000477547 CSN3P07498 182 aa11.64□□□□□ -0.55
SEC13-215ENST00000477547 ZNF266Q14584 549 aa11.64□□□□□ -0.55
SEC13-215ENST00000477547 OPCMLQ14982 345 aa11.64□□□□□ -0.55
SEC13-215ENST00000477547 C9orf66Q5T8R8 295 aa11.64□□□□□ -0.55
SEC13-215ENST00000477547 METTL26Q96S19 204 aa11.64□□□□□ -0.55
SEC13-215ENST00000477547 NPCDR1Q9BY65 106 aa11.64□□□□□ -0.55
SEC13-215ENST00000477547 GPR61Q9BZJ8 451 aa11.64□□□□□ -0.55
SEC13-215ENST00000477547 IGHV3-49A0A0A0MS15 119 aa11.63□□□□□ -0.55
SEC13-215ENST00000477547 WI2-2373I1.2A0A1W2PRP0 233 aa11.63□□□□□ -0.55
SEC13-215ENST00000477547 K7EMT4 169 aa11.63□□□□□ -0.55
SEC13-215ENST00000477547 CFDP00746 253 aaPredicted RBP11.63□□□□□ -0.55
SEC13-215ENST00000477547 FOLR2P14207 255 aa11.63□□□□□ -0.55
SEC13-215ENST00000477547 EIF2B2P49770 351 aaKnown RBP11.63□□□□□ -0.55
SEC13-215ENST00000477547 ZFP69Q49AA0 526 aa11.63□□□□□ -0.55
SEC13-215ENST00000477547 IL34Q6ZMJ4 242 aa11.63□□□□□ -0.55
SEC13-215ENST00000477547 TMEM182Q6ZP80 229 aaPredicted RBP11.63□□□□□ -0.55
SEC13-215ENST00000477547 STPG3Q8N7X2 389 aa11.63□□□□□ -0.55
SEC13-215ENST00000477547 MARC2Q969Z3 335 aa11.63□□□□□ -0.55
SEC13-215ENST00000477547 NEURL2Q9BR09 285 aa11.63□□□□□ -0.55
SEC13-215ENST00000477547 KCNIP2Q9NS61 270 aa11.63□□□□□ -0.55
SEC13-215ENST00000477547 DOK5Q9P104 306 aa11.63□□□□□ -0.55
SEC13-215ENST00000477547 SLC45A2Q9UMX9 530 aa11.63□□□□□ -0.55
SEC13-215ENST00000477547 IGHV7-4-1A0A0J9YVY3 117 aa11.62□□□□□ -0.55
SEC13-215ENST00000477547 HNRNPCP07910 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
SEC13-215ENST00000477547 CBLN1P23435 193 aa11.62□□□□□ -0.55
SEC13-215ENST00000477547 MIC13Q5XKP0 118 aa11.62□□□□□ -0.55
SEC13-215ENST00000477547 ADAMTSL5Q6ZMM2 481 aa11.62□□□□□ -0.55
SEC13-215ENST00000477547 KCNRGQ8N5I3 272 aa11.62□□□□□ -0.55
SEC13-215ENST00000477547 ZNF709Q8N972 641 aa11.62□□□□□ -0.55
SEC13-215ENST00000477547 OR1B1Q8NGR6 318 aa11.62□□□□□ -0.55
SEC13-215ENST00000477547 SCGB1C1Q8TD33 95 aa11.62□□□□□ -0.55
SEC13-215ENST00000477547 NARS2Q96I59 477 aaKnown RBP11.62□□□□□ -0.55
SEC13-215ENST00000477547 RSG1Q9BU20 258 aa11.62□□□□□ -0.55
SEC13-215ENST00000477547 PARD6GQ9BYG4 376 aaPredicted RBP11.62□□□□□ -0.55
SEC13-215ENST00000477547 MRPL27Q9P0M9 148 aaKnown RBP11.62□□□□□ -0.55
SEC13-215ENST00000477547 RABAC1Q9UI14 185 aa11.62□□□□□ -0.55
SEC13-215ENST00000477547 IGHV3OR16-13A0A075B7E8 117 aa11.61□□□□□ -0.55
SEC13-215ENST00000477547 BORCS7-ASMTA0A0B4J1R7 106 aa11.61□□□□□ -0.55
SEC13-215ENST00000477547 IGHV3-74A0A0B4J1X5 117 aa11.61□□□□□ -0.55
SEC13-215ENST00000477547 C17orf112F2Z3M2 114 aa11.61□□□□□ -0.55
SEC13-215ENST00000477547 ORM2P19652 201 aa11.61□□□□□ -0.55
SEC13-215ENST00000477547 CXCL2P19875 107 aa11.61□□□□□ -0.55
SEC13-215ENST00000477547 NPPCP23582 126 aa11.61□□□□□ -0.55
SEC13-215ENST00000477547 BMI1P35226 326 aa11.61□□□□□ -0.55
SEC13-215ENST00000477547 B2MP61769 119 aa11.61□□□□□ -0.55
SEC13-215ENST00000477547 HYLS1Q96M11 299 aa11.61□□□□□ -0.55
SEC13-215ENST00000477547 SIGLEC8Q9NYZ4 499 aa11.61□□□□□ -0.55
SEC13-215ENST00000477547 PXMP4Q9Y6I8 212 aa11.61□□□□□ -0.55
SEC13-215ENST00000477547 IGHV3-66A0A0C4DH42 116 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 A0A0D9SG52 128 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 TAAR5O14804 337 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 PFDN1O60925 122 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 C8orf88P0DMB2 117 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 CRYBB3P26998 211 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms