RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 Q8WTZ3 238 aa12.4□□□□□ -0.42
VHL-203ENST00000477538 GGTLC1Q9BX51 225 aa12.4□□□□□ -0.42
VHL-203ENST00000477538 NPCDR1Q9BY65 106 aa12.4□□□□□ -0.42
VHL-203ENST00000477538 YIF1AO95070 293 aa12.39□□□□□ -0.43
VHL-203ENST00000477538 TSPAN15O95858 294 aa12.39□□□□□ -0.43
VHL-203ENST00000477538 GATA2P23769 480 aaPredicted RBP12.39□□□□□ -0.43
VHL-203ENST00000477538 SYNJ2BPP57105 145 aa12.39□□□□□ -0.43
VHL-203ENST00000477538 KLF5Q13887 457 aaPredicted RBP12.39□□□□□ -0.43
VHL-203ENST00000477538 OPCMLQ14982 345 aa12.39□□□□□ -0.43
VHL-203ENST00000477538 BPIFCQ8NFQ6 507 aa12.39□□□□□ -0.43
VHL-203ENST00000477538 OR51G1Q8NGK1 321 aa12.39□□□□□ -0.43
VHL-203ENST00000477538 TMEM190Q8WZ59 177 aa12.39□□□□□ -0.43
VHL-203ENST00000477538 DLX4Q92988 240 aaPredicted RBP12.39□□□□□ -0.43
VHL-203ENST00000477538 RCC1LQ96I51 464 aaKnown RBP12.39□□□□□ -0.43
VHL-203ENST00000477538 ZFAND3Q9H8U3 227 aa12.39□□□□□ -0.43
VHL-203ENST00000477538 CYTL1Q9NRR1 136 aa12.39□□□□□ -0.43
VHL-203ENST00000477538 SLC45A2Q9UMX9 530 aa12.39□□□□□ -0.43
VHL-203ENST00000477538 IGHV3OR16-8A0A075B7F1 116 aa12.38□□□□□ -0.43
VHL-203ENST00000477538 ZNF320A2RRD8 509 aa12.38□□□□□ -0.43
VHL-203ENST00000477538 JTBO76095 146 aa12.38□□□□□ -0.43
VHL-203ENST00000477538 LAMTOR1Q6IAA8 161 aa12.38□□□□□ -0.43
VHL-203ENST00000477538 TOMM20LQ6UXN7 152 aa12.38□□□□□ -0.43
VHL-203ENST00000477538 UNQ9165/PRO28630Q6UXU0 137 aa12.38□□□□□ -0.43
VHL-203ENST00000477538 TMEM182Q6ZP80 229 aaPredicted RBP12.38□□□□□ -0.43
VHL-203ENST00000477538 REC114Q7Z4M0 266 aa12.38□□□□□ -0.43
VHL-203ENST00000477538 ZNF709Q8N972 641 aa12.38□□□□□ -0.43
VHL-203ENST00000477538 HSD17B11Q8NBQ5 300 aa12.38□□□□□ -0.43
VHL-203ENST00000477538 RSG1Q9BU20 258 aa12.38□□□□□ -0.43
VHL-203ENST00000477538 C20orf24Q9BUV8 137 aa12.38□□□□□ -0.43
VHL-203ENST00000477538 C17orf112F2Z3M2 114 aa12.37□□□□□ -0.43
VHL-203ENST00000477538 LGALS9O00182 355 aa12.37□□□□□ -0.43
VHL-203ENST00000477538 IL4P05112 153 aa12.37□□□□□ -0.43
VHL-203ENST00000477538 HNRNPCP07910 306 aaKnown RBP eCLIP12.37□□□□□ -0.435e-9■□□□□ 9.5
VHL-203ENST00000477538 LINC00869P0C866 280 aa12.37□□□□□ -0.43
VHL-203ENST00000477538 RPL29P47914 159 aaKnown RBP12.37□□□□□ -0.43
VHL-203ENST00000477538 LYZP61626 148 aa12.37□□□□□ -0.43
VHL-203ENST00000477538 MIC13Q5XKP0 118 aa12.37□□□□□ -0.43
VHL-203ENST00000477538 STPG3Q8N7X2 389 aa12.37□□□□□ -0.43
VHL-203ENST00000477538 LINC00482Q8N8I6 264 aa12.37□□□□□ -0.43
VHL-203ENST00000477538 RNF125Q96EQ8 232 aa12.37□□□□□ -0.43
VHL-203ENST00000477538 ZNF471Q9BX82 626 aaPredicted RBP12.37□□□□□ -0.43
VHL-203ENST00000477538 KCNIP2Q9NS61 270 aa12.37□□□□□ -0.43
VHL-203ENST00000477538 WI2-2373I1.2A0A1W2PRP0 233 aa12.36□□□□□ -0.43
VHL-203ENST00000477538 OVOL1O14753 267 aa12.36□□□□□ -0.43
VHL-203ENST00000477538 CFDP00746 253 aaPredicted RBP12.36□□□□□ -0.43
VHL-203ENST00000477538 PRR20EP86478 221 aa12.36□□□□□ -0.43
VHL-203ENST00000477538 PRR20CP86479 221 aa12.36□□□□□ -0.43
VHL-203ENST00000477538 PRR20DP86480 221 aa12.36□□□□□ -0.43
VHL-203ENST00000477538 PRR20BP86481 221 aa12.36□□□□□ -0.43
VHL-203ENST00000477538 PRR20AP86496 221 aa12.36□□□□□ -0.43
VHL-203ENST00000477538 SPATA3Q8NHX4 192 aa12.36□□□□□ -0.43
VHL-203ENST00000477538 GINS3Q9BRX5 216 aa12.36□□□□□ -0.43
VHL-203ENST00000477538 UFC1Q9Y3C8 167 aa12.36□□□□□ -0.43
VHL-203ENST00000477538 PXMP4Q9Y6I8 212 aa12.36□□□□□ -0.43
VHL-203ENST00000477538 A8MWP6 167 aa12.35□□□□□ -0.43
VHL-203ENST00000477538 ZNF207O43670 478 aaKnown RBP12.35□□□□□ -0.43
VHL-203ENST00000477538 C4BPBP20851 252 aa12.35□□□□□ -0.43
VHL-203ENST00000477538 ATP6V0CP27449 155 aa12.35□□□□□ -0.43
VHL-203ENST00000477538 B2MP61769 119 aa12.35□□□□□ -0.43
VHL-203ENST00000477538 USF2Q15853 346 aaPredicted RBP12.35□□□□□ -0.43
VHL-203ENST00000477538 OR9G4Q8NGQ1 327 aa12.35□□□□□ -0.43
VHL-203ENST00000477538 PPP1R14BQ96C90 147 aa12.35□□□□□ -0.43
VHL-203ENST00000477538 PBDC1Q9BVG4 233 aa12.35□□□□□ -0.43
VHL-203ENST00000477538 DAZ1Q9NQZ3 744 aaKnown RBP12.35□□□□□ -0.43
VHL-203ENST00000477538 SLC39A9Q9NUM3 307 aa12.35□□□□□ -0.43
VHL-203ENST00000477538 PEMTQ9UBM1 199 aa12.35□□□□□ -0.43
VHL-203ENST00000477538 TIMM9Q9Y5J7 89 aa12.35□□□□□ -0.43
VHL-203ENST00000477538 VWFP04275 2813 aa12.34□□□□□ -0.43
VHL-203ENST00000477538 ELLP55199 621 aaPredicted RBP12.34□□□□□ -0.43
VHL-203ENST00000477538 EIF5AP63241 154 aaKnown RBP12.34□□□□□ -0.43
VHL-203ENST00000477538 TM4SF20Q53R12 229 aa12.34□□□□□ -0.43
VHL-203ENST00000477538 PXDC1Q5TGL8 231 aa12.34□□□□□ -0.43
VHL-203ENST00000477538 Q6ZRG5 221 aa12.34□□□□□ -0.43
VHL-203ENST00000477538 OR1B1Q8NGR6 318 aa12.34□□□□□ -0.43
VHL-203ENST00000477538 GNPNAT1Q96EK6 184 aaPredicted RBP12.34□□□□□ -0.43
VHL-203ENST00000477538 PSMG3Q9BT73 122 aaPredicted RBP12.34□□□□□ -0.43
VHL-203ENST00000477538 ARV1Q9H2C2 271 aa12.34□□□□□ -0.43
VHL-203ENST00000477538 DOK5Q9P104 306 aa12.34□□□□□ -0.43
VHL-203ENST00000477538 RFNGQ9Y644 331 aa12.34□□□□□ -0.43
VHL-203ENST00000477538 TMEM213A2RRL7 107 aa12.33□□□□□ -0.44
VHL-203ENST00000477538 K7EMT4 169 aa12.33□□□□□ -0.44
VHL-203ENST00000477538 ORM2P19652 201 aa12.33□□□□□ -0.44
VHL-203ENST00000477538 PLP1P60201 277 aa12.33□□□□□ -0.44
VHL-203ENST00000477538 FFAR4Q5NUL3 377 aa12.33□□□□□ -0.44
VHL-203ENST00000477538 SLC51BQ86UW2 128 aa12.33□□□□□ -0.44
VHL-203ENST00000477538 STOML3Q8TAV4 291 aa12.33□□□□□ -0.44
VHL-203ENST00000477538 METTL26Q96S19 204 aa12.33□□□□□ -0.44
VHL-203ENST00000477538 SH3BGRL3Q9H299 93 aa12.33□□□□□ -0.44
VHL-203ENST00000477538 RABAC1Q9UI14 185 aa12.33□□□□□ -0.44
VHL-203ENST00000477538 BOLA1Q9Y3E2 137 aa12.33□□□□□ -0.44
VHL-203ENST00000477538 C2orf70A6NJV1 201 aa12.32□□□□□ -0.44
VHL-203ENST00000477538 COX7A2P2O60397 106 aa12.32□□□□□ -0.44
VHL-203ENST00000477538 HYPMO75409 117 aa12.32□□□□□ -0.44
VHL-203ENST00000477538 OR5G3P0C626 314 aa12.32□□□□□ -0.44
VHL-203ENST00000477538 TPT1P13693 172 aaKnown RBP12.32□□□□□ -0.44
VHL-203ENST00000477538 EDN2P20800 178 aa12.32□□□□□ -0.44
VHL-203ENST00000477538 BAP18Q8IXM2 172 aa12.32□□□□□ -0.44
VHL-203ENST00000477538 SLC25A32Q9H2D1 315 aa12.32□□□□□ -0.44
VHL-203ENST00000477538 NOTCH3Q9UM47 2321 aa12.32□□□□□ -0.44
VHL-203ENST00000477538 IGHV3-49A0A0A0MS15 119 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms