RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-211	ENST00000476994	SLC45A2	Q9UMX9	530 aa		13.49	□□□□□ -0.25
SREBF1-211	ENST00000476994	ZFP92	A6NM28	416 aa		13.48	□□□□□ -0.25
SREBF1-211	ENST00000476994	NUPL2	O15504	423 aa	Known RBP	13.48	□□□□□ -0.25
SREBF1-211	ENST00000476994	GGCT	O75223	188 aa	Known RBP	13.48	□□□□□ -0.25
SREBF1-211	ENST00000476994	FGF7	P21781	194 aa		13.48	□□□□□ -0.25
SREBF1-211	ENST00000476994	OPCML	Q14982	345 aa		13.48	□□□□□ -0.25
SREBF1-211	ENST00000476994	OR1N2	Q8NGR9	330 aa		13.48	□□□□□ -0.25
SREBF1-211	ENST00000476994	ARPC5L	Q9BPX5	153 aa		13.48	□□□□□ -0.25
SREBF1-211	ENST00000476994	ZFAND3	Q9H8U3	227 aa		13.48	□□□□□ -0.25
SREBF1-211	ENST00000476994	LINC01619	G3V211	115 aa		13.47	□□□□□ -0.25
SREBF1-211	ENST00000476994	CCL24	O00175	119 aa		13.47	□□□□□ -0.25
SREBF1-211	ENST00000476994	AGPAT2	O15120	278 aa		13.47	□□□□□ -0.25
SREBF1-211	ENST00000476994	MPDU1	O75352	247 aa		13.47	□□□□□ -0.25
SREBF1-211	ENST00000476994	OR2C1	O95371	312 aa		13.47	□□□□□ -0.25
SREBF1-211	ENST00000476994	TOMM40	O96008	361 aa		13.47	□□□□□ -0.25
SREBF1-211	ENST00000476994	HOXD3	P31249	432 aa	Predicted RBP	13.47	□□□□□ -0.25
SREBF1-211	ENST00000476994	ZNF616	Q08AN1	781 aa		13.47	□□□□□ -0.25
SREBF1-211	ENST00000476994	ZNF266	Q14584	549 aa		13.47	□□□□□ -0.25
SREBF1-211	ENST00000476994	DEFB121	Q5J5C9	76 aa		13.47	□□□□□ -0.25
SREBF1-211	ENST00000476994	ZNF600	Q6ZNG1	722 aa		13.47	□□□□□ -0.25
SREBF1-211	ENST00000476994	CYP2G1P	Q6ZSU1	146 aa		13.47	□□□□□ -0.25
SREBF1-211	ENST00000476994	NPCDR1	Q9BY65	106 aa		13.47	□□□□□ -0.25
SREBF1-211	ENST00000476994	IGHV3-35	A0A0C4DH35	117 aa		13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	LINC00869	P0C866	280 aa		13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	PSG1	P11464	419 aa		13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	GATA2	P23769	480 aa	Predicted RBP	13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	SLURP1	P55000	103 aa		13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	PRR20E	P86478	221 aa		13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	PRR20C	P86479	221 aa		13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	PRR20D	P86480	221 aa		13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	PRR20B	P86481	221 aa		13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	PRR20A	P86496	221 aa		13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	GPHB5	Q86YW7	130 aa		13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	PPP1R14B	Q96C90	147 aa		13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	BOLA1	Q9Y3E2	137 aa		13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	RFNG	Q9Y644	331 aa		13.46	□□□□□ -0.25
SREBF1-211	ENST00000476994	NDUFA4	O00483	81 aa		13.45	□□□□□ -0.26
SREBF1-211	ENST00000476994	IFNA5	P01569	189 aa		13.45	□□□□□ -0.26
SREBF1-211	ENST00000476994	ZP3	P21754	424 aa		13.45	□□□□□ -0.26
SREBF1-211	ENST00000476994	MYCNOS	P40205	109 aa		13.45	□□□□□ -0.26
SREBF1-211	ENST00000476994	CAMLG	P49069	296 aa		13.45	□□□□□ -0.26
SREBF1-211	ENST00000476994	KLF5	Q13887	457 aa	Predicted RBP	13.45	□□□□□ -0.26
SREBF1-211	ENST00000476994	TOMM20L	Q6UXN7	152 aa		13.45	□□□□□ -0.26
SREBF1-211	ENST00000476994	UNQ9165/PRO28630	Q6UXU0	137 aa		13.45	□□□□□ -0.26
SREBF1-211	ENST00000476994	TMEM190	Q8WZ59	177 aa		13.45	□□□□□ -0.26
SREBF1-211	ENST00000476994	RSG1	Q9BU20	258 aa		13.45	□□□□□ -0.26
SREBF1-211	ENST00000476994	MCRIP2	Q9BUT9	160 aa	Known RBP	13.45	□□□□□ -0.26
SREBF1-211	ENST00000476994	ZMAT5	Q9UDW3	170 aa	Known RBP	13.45	□□□□□ -0.26
SREBF1-211	ENST00000476994	KANTR	A0A1W2PQU2	76 aa		13.44	□□□□□ -0.26
SREBF1-211	ENST00000476994	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.44	□□□□□ -0.26
SREBF1-211	ENST00000476994	JTB	O76095	146 aa		13.44	□□□□□ -0.26
SREBF1-211	ENST00000476994	ATP6V0C	P27449	155 aa		13.44	□□□□□ -0.26
SREBF1-211	ENST00000476994	RPL29	P47914	159 aa	Known RBP	13.44	□□□□□ -0.26
SREBF1-211	ENST00000476994	SELENOT	P62341	195 aa		13.44	□□□□□ -0.26
SREBF1-211	ENST00000476994	REL	Q04864	619 aa	Predicted RBP	13.44	□□□□□ -0.26
SREBF1-211	ENST00000476994	RPEL1	Q2QD12	228 aa		13.44	□□□□□ -0.26
SREBF1-211	ENST00000476994	MIC13	Q5XKP0	118 aa		13.44	□□□□□ -0.26
SREBF1-211	ENST00000476994	BPIFC	Q8NFQ6	507 aa		13.44	□□□□□ -0.26
SREBF1-211	ENST00000476994	STOML3	Q8TAV4	291 aa		13.44	□□□□□ -0.26
SREBF1-211	ENST00000476994	GINS3	Q9BRX5	216 aa		13.44	□□□□□ -0.26
SREBF1-211	ENST00000476994	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
SREBF1-211	ENST00000476994	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.43	□□□□□ -0.26
SREBF1-211	ENST00000476994	SCGB2A1	O75556	95 aa		13.43	□□□□□ -0.26
SREBF1-211	ENST00000476994	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
SREBF1-211	ENST00000476994	RD3L	P0DJH9	198 aa		13.43	□□□□□ -0.26
SREBF1-211	ENST00000476994	PLP1	P60201	277 aa		13.43	□□□□□ -0.26
SREBF1-211	ENST00000476994	STPG3	Q8N7X2	389 aa		13.43	□□□□□ -0.26
SREBF1-211	ENST00000476994	HSD17B11	Q8NBQ5	300 aa		13.43	□□□□□ -0.26
SREBF1-211	ENST00000476994	DLX4	Q92988	240 aa	Predicted RBP	13.43	□□□□□ -0.26
SREBF1-211	ENST00000476994	TIMM9	Q9Y5J7	89 aa		13.43	□□□□□ -0.26
SREBF1-211	ENST00000476994		A8MWP6	167 aa		13.42	□□□□□ -0.26
SREBF1-211	ENST00000476994	LGALS9	O00182	355 aa		13.42	□□□□□ -0.26
SREBF1-211	ENST00000476994	YIF1A	O95070	293 aa		13.42	□□□□□ -0.26
SREBF1-211	ENST00000476994	RAB31	Q13636	194 aa		13.42	□□□□□ -0.26
SREBF1-211	ENST00000476994	USF2	Q15853	346 aa	Predicted RBP	13.42	□□□□□ -0.26
SREBF1-211	ENST00000476994	LINC00482	Q8N8I6	264 aa		13.42	□□□□□ -0.26
SREBF1-211	ENST00000476994	OR51G1	Q8NGK1	321 aa		13.42	□□□□□ -0.26
SREBF1-211	ENST00000476994	SCGB1C1	Q8TD33	95 aa		13.42	□□□□□ -0.26
SREBF1-211	ENST00000476994		Q8WTZ3	238 aa		13.42	□□□□□ -0.26
SREBF1-211	ENST00000476994	PSMG3	Q9BT73	122 aa	Predicted RBP	13.42	□□□□□ -0.26
SREBF1-211	ENST00000476994	ZNF471	Q9BX82	626 aa	Predicted RBP	13.42	□□□□□ -0.26
SREBF1-211	ENST00000476994	SH3BGRL3	Q9H299	93 aa		13.42	□□□□□ -0.26
SREBF1-211	ENST00000476994	PXMP4	Q9Y6I8	212 aa		13.42	□□□□□ -0.26
SREBF1-211	ENST00000476994	IGHV3OR16-8	A0A075B7F1	116 aa		13.41	□□□□□ -0.26
SREBF1-211	ENST00000476994		K7EIL1	84 aa		13.41	□□□□□ -0.26
SREBF1-211	ENST00000476994	FABP1	P07148	127 aa		13.41	□□□□□ -0.26
SREBF1-211	ENST00000476994	SYNJ2BP	P57105	145 aa		13.41	□□□□□ -0.26
SREBF1-211	ENST00000476994	SLC51B	Q86UW2	128 aa		13.41	□□□□□ -0.26
SREBF1-211	ENST00000476994	OR2G3	Q8NGZ4	309 aa		13.41	□□□□□ -0.26
SREBF1-211	ENST00000476994	RNF125	Q96EQ8	232 aa		13.41	□□□□□ -0.26
SREBF1-211	ENST00000476994	SLC39A9	Q9NUM3	307 aa		13.41	□□□□□ -0.26
SREBF1-211	ENST00000476994	TMEM213	A2RRL7	107 aa		13.4	□□□□□ -0.26
SREBF1-211	ENST00000476994	CFD	P00746	253 aa	Predicted RBP	13.4	□□□□□ -0.26
SREBF1-211	ENST00000476994	IL4	P05112	153 aa		13.4	□□□□□ -0.26
SREBF1-211	ENST00000476994	SPP1	P10451	314 aa		13.4	□□□□□ -0.26
SREBF1-211	ENST00000476994	EDN2	P20800	178 aa		13.4	□□□□□ -0.26
SREBF1-211	ENST00000476994	B2M	P61769	119 aa		13.4	□□□□□ -0.26
SREBF1-211	ENST00000476994	FAM106A	Q4KMX7	169 aa		13.4	□□□□□ -0.26
SREBF1-211	ENST00000476994	PATE2	Q6UY27	113 aa		13.4	□□□□□ -0.26
SREBF1-211	ENST00000476994	IL34	Q6ZMJ4	242 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms