RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 ZNF256Q9Y2P7 627 aaPredicted RBP10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TRAV25A0A0B4J276 109 aa10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 FAM24AA6NFZ4 105 aa10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 GIPP09681 153 aaPredicted RBP10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 NPPCP23582 126 aa10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 SELENOTP62341 195 aa10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 BAXQ07812 192 aa10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 SLC38A11Q08AI6 406 aa10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 RAB31Q13636 194 aa10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 FCN2Q15485 313 aa10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 TEPPQ6URK8 271 aa10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 S100A7AQ86SG5 101 aa10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 LILRB2Q8N423 598 aa10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 GRAMD2BQ96HH9 432 aa10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 ZFAND3Q9H8U3 227 aa10.02□□□□□ -0.81
HLA-DPA1-246ENST00000476642 IGHV7-4-1A0A0J9YVY3 117 aa10.01□□□□□ -0.81
HLA-DPA1-246ENST00000476642 CCNKO75909 580 aa10.01□□□□□ -0.81
HLA-DPA1-246ENST00000476642 CST7O76096 145 aa10.01□□□□□ -0.81
HLA-DPA1-246ENST00000476642 CXCL3P19876 107 aa10.01□□□□□ -0.81
HLA-DPA1-246ENST00000476642 RAP2BP61225 183 aa10.01□□□□□ -0.81
HLA-DPA1-246ENST00000476642 DEFB114Q30KQ6 69 aa10.01□□□□□ -0.81
HLA-DPA1-246ENST00000476642 RBPMS2Q6ZRY4 209 aaKnown RBP10.01□□□□□ -0.81
HLA-DPA1-246ENST00000476642 BPIFCQ8NFQ6 507 aa10.01□□□□□ -0.81
HLA-DPA1-246ENST00000476642 OR11H7Q8NGC8 314 aa10.01□□□□□ -0.81
HLA-DPA1-246ENST00000476642 SMPXQ9UHP9 88 aa10.01□□□□□ -0.81
HLA-DPA1-246ENST00000476642 IL4P05112 153 aa10□□□□□ -0.81
HLA-DPA1-246ENST00000476642 PSG1P11464 419 aa10□□□□□ -0.81
HLA-DPA1-246ENST00000476642 RNF125Q96EQ8 232 aa10□□□□□ -0.81
HLA-DPA1-246ENST00000476642 UQCC1Q9NVA1 299 aa10□□□□□ -0.81
HLA-DPA1-246ENST00000476642 AURKAIP1Q9NWT8 199 aaPredicted RBP10□□□□□ -0.81
HLA-DPA1-246ENST00000476642 OR5AC2Q9NZP5 309 aa10□□□□□ -0.81
HLA-DPA1-246ENST00000476642 RABAC1Q9UI14 185 aa10□□□□□ -0.81
HLA-DPA1-246ENST00000476642 IGKV1D-37A0A075B6S9 117 aa9.99□□□□□ -0.81
HLA-DPA1-246ENST00000476642 IGSF23A1L1A6 192 aa9.99□□□□□ -0.81
HLA-DPA1-246ENST00000476642 GP9P14770 177 aa9.99□□□□□ -0.81
HLA-DPA1-246ENST00000476642 CRYBB3P26998 211 aa9.99□□□□□ -0.81
HLA-DPA1-246ENST00000476642 CD300EQ496F6 205 aaPredicted RBP9.99□□□□□ -0.81
HLA-DPA1-246ENST00000476642 BTNL8Q6UX41 500 aa9.99□□□□□ -0.81
HLA-DPA1-246ENST00000476642 ADAMTSL5Q6ZMM2 481 aa9.99□□□□□ -0.81
HLA-DPA1-246ENST00000476642 TMEM217Q8N7C4 229 aa9.99□□□□□ -0.81
HLA-DPA1-246ENST00000476642 TMEM147Q9BVK8 224 aa9.99□□□□□ -0.81
HLA-DPA1-246ENST00000476642 RHPN1-AS1Q9BWJ2 59 aa9.99□□□□□ -0.81
HLA-DPA1-246ENST00000476642 SLC45A2Q9UMX9 530 aa9.99□□□□□ -0.81
HLA-DPA1-246ENST00000476642 RNF24Q9Y225 148 aa9.99□□□□□ -0.81
HLA-DPA1-246ENST00000476642 IGHV3OR16-8A0A075B7F1 116 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 WI2-2373I1.2A0A1W2PRP0 233 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 H0YIZ8 118 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 CHEK1O14757 476 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 ZNF207O43670 478 aaKnown RBP9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 MPDU1O75352 247 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 LYL1P12980 280 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 KRTAP10-11P60412 298 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 PAFAH1B2P68402 229 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 EWSR1Q01844 656 aaKnown RBP eCLIP9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 ZNF90Q03938 601 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 CD300CQ08708 224 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 VWC2Q2TAL6 325 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 PXDC1Q5TGL8 231 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 CYP2G1PQ6ZSU1 146 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 ZNF546Q86UE3 836 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 GTSCR1Q86UQ5 136 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 HAPLN4Q86UW8 402 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 RNF126Q9BV68 326 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 MBD2Q9UBB5 411 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 MLXQ9UH92 298 aa9.98□□□□□ -0.81
HLA-DPA1-246ENST00000476642 SORL1Q92673 2214 aa9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 IGKV1OR2-108A0A075B7D4 117 aa9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 HELTA6NFD8 242 aa9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 TSPAN4O14817 238 aa9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 DFFBO76075 338 aa9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 RPL12P30050 165 aaKnown RBP9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 AP2S1P53680 142 aaPredicted RBP9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 LYZP61626 148 aa9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 ARL16Q0P5N6 197 aa9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 ZFP69Q49AA0 526 aa9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 OR5C1Q8NGR4 320 aa9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 ZNF414Q96IQ9 312 aa9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 SPAG8Q99932 426 aaPredicted RBP9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 PBDC1Q9BVG4 233 aa9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 VSIRQ9H7M9 311 aa9.97□□□□□ -0.81
HLA-DPA1-246ENST00000476642 OR4C46A6NHA9 309 aa9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 CMC4P56277 68 aaPredicted RBP9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 IFITM2Q01629 132 aa9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 NHLH2Q02577 135 aa9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 OR2F1Q13607 317 aa9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 USF2Q15853 346 aaPredicted RBP9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 GUCA2BQ16661 112 aa9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 DEFB121Q5J5C9 76 aa9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 SLC7A5P1Q8MH63 180 aa9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 TMEM61Q8N0U2 210 aa9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 OR2T35Q8NGX2 323 aa9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 WDR89Q96FK6 387 aaPredicted RBP9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 KCNIP2Q9NS61 270 aa9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 FBXL17Q9UF56 701 aa9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 WDR83OSQ9Y284 106 aa9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 LSM4Q9Y4Z0 139 aaKnown RBP9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 HSPB11Q9Y547 144 aa9.96□□□□□ -0.82
HLA-DPA1-246ENST00000476642 UBE2L5PA0A1B0GUS4 154 aa9.95□□□□□ -0.82
HLA-DPA1-246ENST00000476642 AGPAT2O15120 278 aa9.95□□□□□ -0.82
HLA-DPA1-246ENST00000476642 EDN2P20800 178 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms