RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 PGAM2P15259 253 aa11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 PAX9P55771 341 aa11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 SPCS3P61009 180 aa11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 C2orf83Q53S99 150 aa11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 SAMD12Q8N8I0 201 aa11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 OR51G1Q8NGK1 321 aa11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 RNASEH2CQ8TDP1 164 aaKnown RBP11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 GPX8Q8TED1 209 aa11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 NPIPB3Q92617 1050 aa11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 KRTAP1-5Q9BYS1 174 aa11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 M0QYG6 137 aa11.47□□□□□ -0.57
APOBEC3F-203ENST00000476513 PRM2P04554 102 aa11.47□□□□□ -0.57
APOBEC3F-203ENST00000476513 PSG1P11464 419 aa11.47□□□□□ -0.57
APOBEC3F-203ENST00000476513 BTF3P20290 206 aaKnown RBP11.47□□□□□ -0.57
APOBEC3F-203ENST00000476513 PIGPP57054 158 aa11.47□□□□□ -0.57
APOBEC3F-203ENST00000476513 EBLN2Q6P2I7 272 aa11.47□□□□□ -0.57
APOBEC3F-203ENST00000476513 IZUMO2Q6UXV1 221 aa11.47□□□□□ -0.57
APOBEC3F-203ENST00000476513 SSX7Q7RTT5 188 aa11.47□□□□□ -0.57
APOBEC3F-203ENST00000476513 TMEM170AQ8WVE7 144 aa11.47□□□□□ -0.57
APOBEC3F-203ENST00000476513 ACY3Q96HD9 319 aa11.47□□□□□ -0.57
APOBEC3F-203ENST00000476513 TMEM208Q9BTX3 173 aa11.47□□□□□ -0.57
APOBEC3F-203ENST00000476513 Q9H8V8 135 aa11.47□□□□□ -0.57
APOBEC3F-203ENST00000476513 A0A0J9YX75 114 aa11.46□□□□□ -0.57
APOBEC3F-203ENST00000476513 C3orf85A0A1B0GTC6 90 aa11.46□□□□□ -0.57
APOBEC3F-203ENST00000476513 ZNF705GA8MUZ8 300 aaPredicted RBP11.46□□□□□ -0.57
APOBEC3F-203ENST00000476513 TRIM16LQ309B1 348 aa11.46□□□□□ -0.57
APOBEC3F-203ENST00000476513 SP6Q3SY56 376 aa11.46□□□□□ -0.57
APOBEC3F-203ENST00000476513 AARDQ4LEZ3 155 aa11.46□□□□□ -0.57
APOBEC3F-203ENST00000476513 RNF141Q8WVD5 230 aa11.46□□□□□ -0.57
APOBEC3F-203ENST00000476513 GPR146Q96CH1 333 aa11.46□□□□□ -0.57
APOBEC3F-203ENST00000476513 RNF125Q96EQ8 232 aa11.46□□□□□ -0.57
APOBEC3F-203ENST00000476513 RRNAD1Q96FB5 475 aaKnown RBP11.46□□□□□ -0.57
APOBEC3F-203ENST00000476513 ZNF486Q96H40 463 aaPredicted RBP11.46□□□□□ -0.57
APOBEC3F-203ENST00000476513 IGF2BP2-AS1Q96M15 143 aa11.46□□□□□ -0.57
APOBEC3F-203ENST00000476513 HEYLQ9NQ87 328 aaPredicted RBP11.46□□□□□ -0.57
APOBEC3F-203ENST00000476513 RCVRNP35243 200 aa11.45□□□□□ -0.58
APOBEC3F-203ENST00000476513 NUP62P37198 522 aaPredicted RBP11.45□□□□□ -0.58
APOBEC3F-203ENST00000476513 CLINT1Q14677 625 aa11.45□□□□□ -0.58
APOBEC3F-203ENST00000476513 TTC32Q5I0X7 151 aa11.45□□□□□ -0.58
APOBEC3F-203ENST00000476513 AMTNQ6UX39 209 aa11.45□□□□□ -0.58
APOBEC3F-203ENST00000476513 SLC24A4Q8NFF2 622 aa11.45□□□□□ -0.58
APOBEC3F-203ENST00000476513 OR52E5Q8NH55 327 aa11.45□□□□□ -0.58
APOBEC3F-203ENST00000476513 PBDC1Q9BVG4 233 aa11.45□□□□□ -0.58
APOBEC3F-203ENST00000476513 FAT1Q14517 4588 aa11.45□□□□□ -0.58
APOBEC3F-203ENST00000476513 A8MTW9 85 aa11.44□□□□□ -0.58
APOBEC3F-203ENST00000476513 ISLRO14498 428 aa11.44□□□□□ -0.58
APOBEC3F-203ENST00000476513 ATP5G1P05496 136 aa11.44□□□□□ -0.58
APOBEC3F-203ENST00000476513 ATP5G3P48201 142 aa11.44□□□□□ -0.58
APOBEC3F-203ENST00000476513 FCN2Q15485 313 aa11.44□□□□□ -0.58
APOBEC3F-203ENST00000476513 OR8G2PQ6IF36 304 aa11.44□□□□□ -0.58
APOBEC3F-203ENST00000476513 ETFRF1Q6IPR1 90 aa11.44□□□□□ -0.58
APOBEC3F-203ENST00000476513 RNASE11Q8TAA1 199 aaKnown RBP11.44□□□□□ -0.58
APOBEC3F-203ENST00000476513 ABHD1Q96SE0 405 aa11.44□□□□□ -0.58
APOBEC3F-203ENST00000476513 PFDN2Q9UHV9 154 aa11.44□□□□□ -0.58
APOBEC3F-203ENST00000476513 PLAC8L1A1L4L8 177 aa11.43□□□□□ -0.58
APOBEC3F-203ENST00000476513 ELK1P19419 428 aa11.43□□□□□ -0.58
APOBEC3F-203ENST00000476513 UCP1P25874 307 aa11.43□□□□□ -0.58
APOBEC3F-203ENST00000476513 TGFBR1P36897 503 aa11.43□□□□□ -0.58
APOBEC3F-203ENST00000476513 DLK1P80370 383 aa11.43□□□□□ -0.58
APOBEC3F-203ENST00000476513 CROCCP3Q8IVE0 287 aa11.43□□□□□ -0.58
APOBEC3F-203ENST00000476513 LYPD1Q8N2G4 141 aa11.43□□□□□ -0.58
APOBEC3F-203ENST00000476513 OR4C16Q8NGL9 310 aa11.43□□□□□ -0.58
APOBEC3F-203ENST00000476513 C20orf173Q96LM9 149 aa11.43□□□□□ -0.58
APOBEC3F-203ENST00000476513 Q9H3A6 140 aa11.43□□□□□ -0.58
APOBEC3F-203ENST00000476513 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.43□□□□□ -0.58
APOBEC3F-203ENST00000476513 DOK5Q9P104 306 aa11.43□□□□□ -0.58
APOBEC3F-203ENST00000476513 FLG2Q5D862 2391 aaPredicted RBP11.42□□□□□ -0.58
APOBEC3F-203ENST00000476513 CBY3A6NI87 242 aa11.42□□□□□ -0.58
APOBEC3F-203ENST00000476513 TSPOP30536 169 aa11.42□□□□□ -0.58
APOBEC3F-203ENST00000476513 XGP55808 180 aa11.42□□□□□ -0.58
APOBEC3F-203ENST00000476513 SUPT4H1P63272 117 aaKnown RBP11.42□□□□□ -0.58
APOBEC3F-203ENST00000476513 C1orf194Q5T5A4 169 aa11.42□□□□□ -0.58
APOBEC3F-203ENST00000476513 LHFPL1Q86WI0 220 aa11.42□□□□□ -0.58
APOBEC3F-203ENST00000476513 SNX29P2Q8IUI4 249 aa11.42□□□□□ -0.58
APOBEC3F-203ENST00000476513 RPRMQ9NS64 109 aa11.42□□□□□ -0.58
APOBEC3F-203ENST00000476513 RAB26Q9ULW5 256 aa11.42□□□□□ -0.58
APOBEC3F-203ENST00000476513 CEBPZOSA8MTT3 80 aa11.41□□□□□ -0.58
APOBEC3F-203ENST00000476513 CRXO43186 299 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3F-203ENST00000476513 AZU1P20160 251 aa11.41□□□□□ -0.58
APOBEC3F-203ENST00000476513 RPS19P39019 145 aaKnown RBP11.41□□□□□ -0.58
APOBEC3F-203ENST00000476513 Q5VSD8 79 aa11.41□□□□□ -0.58
APOBEC3F-203ENST00000476513 FAM219AQ8IW50 185 aa11.41□□□□□ -0.58
APOBEC3F-203ENST00000476513 Q9H521 79 aa11.41□□□□□ -0.58
APOBEC3F-203ENST00000476513 COPZ2Q9P299 210 aa11.41□□□□□ -0.58
APOBEC3F-203ENST00000476513 M0R2Z0 102 aa11.4□□□□□ -0.58
APOBEC3F-203ENST00000476513 INSP01308 110 aa11.4□□□□□ -0.58
APOBEC3F-203ENST00000476513 OR11H7Q8NGC8 314 aa11.4□□□□□ -0.58
APOBEC3F-203ENST00000476513 UHRF2Q96PU4 802 aa11.4□□□□□ -0.58
APOBEC3F-203ENST00000476513 CACNG5Q9UF02 275 aa11.4□□□□□ -0.58
APOBEC3F-203ENST00000476513 MYCBP2O75592 4640 aa11.4□□□□□ -0.59
APOBEC3F-203ENST00000476513 A0A1W2PPQ1 181 aa11.39□□□□□ -0.59
APOBEC3F-203ENST00000476513 A6NHS1 94 aa11.39□□□□□ -0.59
APOBEC3F-203ENST00000476513 LYZP61626 148 aa11.39□□□□□ -0.59
APOBEC3F-203ENST00000476513 B2MP61769 119 aa11.39□□□□□ -0.59
APOBEC3F-203ENST00000476513 ZNF90Q03938 601 aa11.39□□□□□ -0.59
APOBEC3F-203ENST00000476513 KLF9Q13886 244 aaPredicted RBP11.39□□□□□ -0.59
APOBEC3F-203ENST00000476513 SPINK13Q1W4C9 94 aa11.39□□□□□ -0.59
APOBEC3F-203ENST00000476513 NMSQ5H8A3 153 aa11.39□□□□□ -0.59
APOBEC3F-203ENST00000476513 SAMD13Q5VXD3 122 aa11.39□□□□□ -0.59
APOBEC3F-203ENST00000476513 NOXA1Q86UR1 476 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms