RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 POM121L12Q8N7R1 296 aa9.38□□□□□ -0.91
MRPL55-228ENST00000476267 OR4C16Q8NGL9 310 aa9.38□□□□□ -0.91
MRPL55-228ENST00000476267 SMIM4Q8WVI0 70 aa9.38□□□□□ -0.91
MRPL55-228ENST00000476267 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
MRPL55-228ENST00000476267 C14orf166Q9Y224 244 aaKnown RBP9.38□□□□□ -0.91
MRPL55-228ENST00000476267 IGKV1D-37A0A075B6S9 117 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 CEBPZOSA8MTT3 80 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 SOCS3O14543 225 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 GSTZ1O43708 216 aaPredicted RBP9.37□□□□□ -0.91
MRPL55-228ENST00000476267 RD3LP0DJH9 198 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 P0DMU3 169 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 FAM231AP0DMU4 169 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 FAM231CP0DMU5 169 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 NKX2-1P43699 371 aaPredicted RBP9.37□□□□□ -0.91
MRPL55-228ENST00000476267 DEFB1P60022 68 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 NUTF2P61970 127 aaKnown RBP9.37□□□□□ -0.91
MRPL55-228ENST00000476267 MRPS10P82664 201 aaKnown RBP9.37□□□□□ -0.91
MRPL55-228ENST00000476267 ETFRF1Q6IPR1 90 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 ZNF709Q8N972 641 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 OR51G1Q8NGK1 321 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 IL22RA2Q969J5 263 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 ACY3Q96HD9 319 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 CLUHP3Q96NS8 147 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 HSPB7Q9UBY9 170 aa9.37□□□□□ -0.91
MRPL55-228ENST00000476267 CTDSP2O14595 271 aa9.36□□□□□ -0.91
MRPL55-228ENST00000476267 CTDSPLO15194 276 aa9.36□□□□□ -0.91
MRPL55-228ENST00000476267 SULT1A3P0DMM9 295 aa9.36□□□□□ -0.91
MRPL55-228ENST00000476267 SULT1A4P0DMN0 295 aa9.36□□□□□ -0.91
MRPL55-228ENST00000476267 NDUFAF3Q9BU61 184 aa9.36□□□□□ -0.91
MRPL55-228ENST00000476267 WDR12Q9GZL7 423 aaKnown RBP9.36□□□□□ -0.91
MRPL55-228ENST00000476267 SAV1Q9H4B6 383 aaPredicted RBP9.36□□□□□ -0.91
MRPL55-228ENST00000476267 PRR13Q9NZ81 148 aa9.36□□□□□ -0.91
MRPL55-228ENST00000476267 CACFD1Q9UGQ2 172 aa9.36□□□□□ -0.91
MRPL55-228ENST00000476267 DISC1C4P0D8 188 aa9.35□□□□□ -0.91
MRPL55-228ENST00000476267 AKAIN1P0CW23 69 aa9.35□□□□□ -0.91
MRPL55-228ENST00000476267 SUPT4H1P63272 117 aaKnown RBP9.35□□□□□ -0.91
MRPL55-228ENST00000476267 OR8G2PQ6IF36 304 aa9.35□□□□□ -0.91
MRPL55-228ENST00000476267 NOXA1Q86UR1 476 aa9.35□□□□□ -0.91
MRPL55-228ENST00000476267 CENPSQ8N2Z9 138 aa9.35□□□□□ -0.91
MRPL55-228ENST00000476267 OR51S1Q8NGJ8 323 aa9.35□□□□□ -0.91
MRPL55-228ENST00000476267 U3KQ87 197 aa9.35□□□□□ -0.91
MRPL55-228ENST00000476267 ANKRD20A5PA0PJZ0 165 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 SMIM9A6NGZ8 99 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 MED14OSP0DP75 135 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 PSMB3P49720 205 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 ZNF90Q03938 601 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 GAMTQ14353 236 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 SPCS2Q15005 226 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 ZNF79Q15937 498 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 LGALS9BQ3B8N2 356 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 FOXI2Q6ZQN5 318 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 Q6ZR54 194 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 DTD1Q8TEA8 209 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 PRRT1Q99946 306 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 RBKSQ9H477 322 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 DKK2Q9UBU2 259 aa9.34□□□□□ -0.91
MRPL55-228ENST00000476267 A0A0B4J2A0 478 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 TMEM189A5PLL7 270 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 PRSS29PA6NIE9 313 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 RGS5O15539 181 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 IFNA10P01566 189 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 SPART-AS1P0CW21 52 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 NUP62P37198 522 aaPredicted RBP9.33□□□□□ -0.92
MRPL55-228ENST00000476267 CCR6P51684 374 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 PAX9P55771 341 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 KLF9Q13886 244 aaPredicted RBP9.33□□□□□ -0.92
MRPL55-228ENST00000476267 SMCO1Q147U7 214 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 GSG1LQ6UXU4 331 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 LYZL2Q7Z4W2 148 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 LGI3Q8N145 548 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 C17orf77Q96MU5 243 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 SHPKQ9UHJ6 478 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 HSPG2P98160 4391 aa9.33□□□□□ -0.92
MRPL55-228ENST00000476267 IGKV1OR2-108A0A075B7D4 117 aa9.32□□□□□ -0.92
MRPL55-228ENST00000476267 A8MTW9 85 aa9.32□□□□□ -0.92
MRPL55-228ENST00000476267 PITX3O75364 302 aa9.32□□□□□ -0.92
MRPL55-228ENST00000476267 GPX4P36969 197 aaPredicted RBP9.32□□□□□ -0.92
MRPL55-228ENST00000476267 ALDH3B2P48448 385 aa9.32□□□□□ -0.92
MRPL55-228ENST00000476267 ATP5IP56385 69 aaPredicted RBP9.32□□□□□ -0.92
MRPL55-228ENST00000476267 FXYD7P58549 80 aa9.32□□□□□ -0.92
MRPL55-228ENST00000476267 OXA1LQ15070 435 aa9.32□□□□□ -0.92
MRPL55-228ENST00000476267 C1orf194Q5T5A4 169 aa9.32□□□□□ -0.92
MRPL55-228ENST00000476267 C1orf158Q8N1D5 194 aa9.32□□□□□ -0.92
MRPL55-228ENST00000476267 FAM210BQ96KR6 192 aa9.32□□□□□ -0.92
MRPL55-228ENST00000476267 SLC35B3Q9H1N7 401 aa9.32□□□□□ -0.92
MRPL55-228ENST00000476267 RFNGQ9Y644 331 aa9.32□□□□□ -0.92
MRPL55-228ENST00000476267 M0R2N4 97 aa9.31□□□□□ -0.92
MRPL55-228ENST00000476267 IGKV3-20P01619 116 aa9.31□□□□□ -0.92
MRPL55-228ENST00000476267 FAM222AQ5U5X8 452 aa9.31□□□□□ -0.92
MRPL55-228ENST00000476267 CLVS1Q8IUQ0 354 aaPredicted RBP9.31□□□□□ -0.92
MRPL55-228ENST00000476267 DYNC2LI1Q8TCX1 351 aa9.31□□□□□ -0.92
MRPL55-228ENST00000476267 SOSTQ9BQB4 213 aa9.31□□□□□ -0.92
MRPL55-228ENST00000476267 PBDC1Q9BVG4 233 aa9.31□□□□□ -0.92
MRPL55-228ENST00000476267 RABL2AQ9UBK7 228 aaPredicted RBP9.31□□□□□ -0.92
MRPL55-228ENST00000476267 RABL2BQ9UNT1 228 aa9.31□□□□□ -0.92
MRPL55-228ENST00000476267 KCNIP3Q9Y2W7 256 aa9.31□□□□□ -0.92
MRPL55-228ENST00000476267 A0A0J9YX75 114 aa9.3□□□□□ -0.92
MRPL55-228ENST00000476267 ZFP92A6NM28 416 aa9.3□□□□□ -0.92
MRPL55-228ENST00000476267 PRSS46E5RG02 174 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms