RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 ERVK11-1P61568 191 aa14.64□□□□□ -0.07
LPCAT1-202ENST00000475622 SUPT4H1P63272 117 aaKnown RBP14.64□□□□□ -0.07
LPCAT1-202ENST00000475622 CYTL1Q9NRR1 136 aa14.64□□□□□ -0.07
LPCAT1-202ENST00000475622 CRIM1Q9NZV1 1036 aa14.64□□□□□ -0.07
LPCAT1-202ENST00000475622 SELENOKQ9Y6D0 94 aa14.64□□□□□ -0.07
LPCAT1-202ENST00000475622 MTCL1Q9Y4B5 1905 aaKnown RBP14.64□□□□□ -0.07
LPCAT1-202ENST00000475622 MLNRO43193 412 aa14.64□□□□□ -0.07
LPCAT1-202ENST00000475622 TNFSF13O75888 250 aa14.64□□□□□ -0.07
LPCAT1-202ENST00000475622 SIGMAR1Q99720 223 aa14.64□□□□□ -0.07
LPCAT1-202ENST00000475622 MST1P26927 711 aa14.64□□□□□ -0.07
LPCAT1-202ENST00000475622 SLC25A48Q6ZT89 311 aaKnown RBP14.64□□□□□ -0.07
LPCAT1-202ENST00000475622 EXOC3-AS1Q8N2X6 119 aa14.64□□□□□ -0.07
LPCAT1-202ENST00000475622 C11orf44Q8N8P7 122 aa14.64□□□□□ -0.07
LPCAT1-202ENST00000475622 EFNA2O43921 213 aa14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 GTSCR1Q86UQ5 136 aa14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 TNFRSF14Q92956 283 aa14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 POLEQ07864 2286 aa14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 GGTLC3B5MD39 225 aa14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 RPL15P61313 204 aaKnown RBP14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 ATAD5Q96QE3 1844 aa14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 ADARB2-AS1A8MUL3 147 aa14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 WNT2P09544 360 aa14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 LAGE3Q14657 143 aa14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 C3orf36Q3SXR2 165 aa14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 PSG1P11464 419 aa14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 GAGE13Q4V321 117 aa14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 DMRTC2Q8IXT2 367 aaPredicted RBP14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 ERG28Q9UKR5 140 aa14.63□□□□□ -0.07
LPCAT1-202ENST00000475622 TRAV40A0A0B4J280 105 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 TMEM8BA6NDV4 472 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 CRPP02741 224 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 HGFACQ04756 655 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 NAA38Q9BRA0 125 aaKnown RBP14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 SCRT1Q9BWW7 348 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 LTBP4Q8N2S1 1624 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 SRRM5B3KS81 715 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 D6R8Y8 96 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 TMEM86BQ8N661 226 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 AGMATQ9BSE5 352 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 MS4A6AQ9H2W1 248 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 IGKV1-27A0A075B6S5 117 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 LINC00158P58513 81 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 LINC01551Q86U37 167 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 RPP25LQ8N5L8 163 aaKnown RBP14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 M0R2P5 195 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 SRSF7Q16629 238 aaKnown RBP eCLIP14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 MBNL3Q9NUK0 354 aaKnown RBP14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 SMPXQ9UHP9 88 aa14.62□□□□□ -0.07
LPCAT1-202ENST00000475622 TRAV1-1A0A0B4J248 108 aa14.61□□□□□ -0.07
LPCAT1-202ENST00000475622 TRAV41A0A0B4J266 112 aa14.61□□□□□ -0.07
LPCAT1-202ENST00000475622 RGPD3A6NKT7 1758 aaPredicted RBP14.61□□□□□ -0.07
LPCAT1-202ENST00000475622 PSPNO60542 156 aa14.61□□□□□ -0.07
LPCAT1-202ENST00000475622 IGHV2-26A0A0B4J1V2 119 aa14.61□□□□□ -0.07
LPCAT1-202ENST00000475622 C15orf32Q32M92 178 aa14.61□□□□□ -0.07
LPCAT1-202ENST00000475622 NABP1Q96AH0 204 aa14.61□□□□□ -0.07
LPCAT1-202ENST00000475622 DOCK3Q8IZD9 2030 aa14.61□□□□□ -0.07
LPCAT1-202ENST00000475622 ATXN8Q156A1 80 aa14.61□□□□□ -0.07
LPCAT1-202ENST00000475622 CASP8AP2Q9UKL3 1982 aa14.61□□□□□ -0.07
LPCAT1-202ENST00000475622 MORN3Q6PF18 240 aaPredicted RBP14.6□□□□□ -0.07
LPCAT1-202ENST00000475622 SLC25A39Q9BZJ4 359 aaPredicted RBP14.6□□□□□ -0.07
LPCAT1-202ENST00000475622 ZFP36L1Q07352 338 aaKnown RBP14.6□□□□□ -0.07
LPCAT1-202ENST00000475622 MGST2Q99735 147 aa14.6□□□□□ -0.07
LPCAT1-202ENST00000475622 OR9G4Q8NGQ1 327 aa14.6□□□□□ -0.07
LPCAT1-202ENST00000475622 DEFB104AQ8WTQ1 72 aa14.6□□□□□ -0.07
LPCAT1-202ENST00000475622 RFNGQ9Y644 331 aa14.6□□□□□ -0.07
LPCAT1-202ENST00000475622 IGKV1-5P01602 117 aa14.6□□□□□ -0.07
LPCAT1-202ENST00000475622 FAM166AQ6J272 317 aa14.6□□□□□ -0.07
LPCAT1-202ENST00000475622 PHLDA1Q8WV24 401 aaPredicted RBP14.6□□□□□ -0.07
LPCAT1-202ENST00000475622 LYZL1Q6UWQ5 148 aa14.6□□□□□ -0.07
LPCAT1-202ENST00000475622 NPC2P61916 151 aa14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 COL11A2P13942 1736 aaPredicted RBP14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 TDGF1P3P51864 188 aa14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 TRAV3A0A0B4J244 114 aa14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 TCRAP04437 139 aa14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 NMSQ5H8A3 153 aa14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 GGNQ86UU5 652 aa14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 SCN10AQ9Y5Y9 1956 aa14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 LINC01549A6NIU2 74 aa14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 FXYD7P58549 80 aa14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 ZNF672Q499Z4 452 aaPredicted RBP14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 TMEM200BQ69YZ2 307 aa14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 BCL6BQ8N143 479 aaPredicted RBP14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 TMEM105Q8N8V8 129 aa14.59□□□□□ -0.07
LPCAT1-202ENST00000475622 A0A1B0GWJ7 208 aa14.58□□□□□ -0.07
LPCAT1-202ENST00000475622 SRSF4Q08170 494 aaKnown RBP14.58□□□□□ -0.07
LPCAT1-202ENST00000475622 S100A7L2Q5SY68 101 aa14.58□□□□□ -0.07
LPCAT1-202ENST00000475622 E9PLN8 166 aa14.58□□□□□ -0.08
LPCAT1-202ENST00000475622 ZNF415Q09FC8 603 aa14.58□□□□□ -0.08
LPCAT1-202ENST00000475622 ZNF876PQ49A33 203 aa14.58□□□□□ -0.08
LPCAT1-202ENST00000475622 TMEM256Q8N2U0 113 aa14.58□□□□□ -0.08
LPCAT1-202ENST00000475622 A0A1B0GW64 132 aa14.58□□□□□ -0.08
LPCAT1-202ENST00000475622 TMEM238C9JI98 176 aa14.58□□□□□ -0.08
LPCAT1-202ENST00000475622 IGHV1-8P0DP01 117 aa14.58□□□□□ -0.08
LPCAT1-202ENST00000475622 CFHR1Q03591 330 aa14.58□□□□□ -0.08
LPCAT1-202ENST00000475622 THSD7AQ9UPZ6 1657 aa14.58□□□□□ -0.08
LPCAT1-202ENST00000475622 TMEM219Q86XT9 240 aa14.57□□□□□ -0.08
LPCAT1-202ENST00000475622 IGHV3-73A0A0B4J1V6 119 aa14.57□□□□□ -0.08
LPCAT1-202ENST00000475622 GUSBP1Q15486 140 aa14.57□□□□□ -0.08
LPCAT1-202ENST00000475622 TMEM14EPQ6UXP3 125 aa14.57□□□□□ -0.08
LPCAT1-202ENST00000475622 DIDO1Q9BTC0 2240 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms