RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 KCNRGQ8N5I3 272 aa9.09□□□□□ -0.95
HLA-DOB-208ENST00000475235 FAM24BQ8N5W8 94 aa9.09□□□□□ -0.95
HLA-DOB-208ENST00000475235 IL1F10Q8WWZ1 152 aa9.09□□□□□ -0.95
HLA-DOB-208ENST00000475235 CYYR1Q96J86 154 aa9.09□□□□□ -0.95
HLA-DOB-208ENST00000475235 RASL11BQ9BPW5 248 aa9.09□□□□□ -0.95
HLA-DOB-208ENST00000475235 SMDT1Q9H4I9 107 aa9.09□□□□□ -0.95
HLA-DOB-208ENST00000475235 AK3Q9UIJ7 227 aa9.09□□□□□ -0.95
HLA-DOB-208ENST00000475235 TET2Q6N021 2002 aaPredicted RBP9.09□□□□□ -0.95
HLA-DOB-208ENST00000475235 KANTRA0A1W2PQU2 76 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 FOXI3A8MTJ6 420 aaPredicted RBP9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 ATP6V0CP27449 155 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 SULT1A1P50225 295 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 UBE2KP61086 200 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 PAFAH1B2P68402 229 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 HLA-DRB3P79483 266 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 KHDC1LQ5JSQ8 128 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 SAMD5Q5TGI4 173 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 TEX43Q6ZNM6 134 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 ZNF833PQ6ZTB9 187 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 ERASQ7Z444 233 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 Q8N9W7 124 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 RCHY1Q96PM5 261 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 S1PR3Q99500 378 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 ZNF586Q9NXT0 402 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 LAMTOR2Q9Y2Q5 125 aa9.08□□□□□ -0.96
HLA-DOB-208ENST00000475235 BORCS7-ASMTA0A0B4J1R7 106 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 TMEM272A0A1B0GTI8 110 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 A0A1W2PRX2 142 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 ZNF736B4DX44 427 aaPredicted RBP9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 MPPED1O15442 326 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 BCL2L11O43521 198 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 SFTA3P0C7M3 94 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 CNN1P51911 297 aaKnown RBP9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 PAX9P55771 341 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 TMEM50BP56557 158 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 DHRS2Q13268 280 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 TMEM78Q5T7P6 136 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 GTF2H5Q6ZYL4 71 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 ODF3L1Q8IXM7 274 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 OR5AN1Q8NGI8 311 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 IL22RA2Q969J5 263 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 ARHGAP5-AS1Q96IT6 56 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 RAB40CQ96S21 281 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 IMMP2LQ96T52 175 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 PECRQ9BY49 303 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 IFI27L2Q9H2X8 130 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 UQCR10Q9UDW1 63 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 RFNGQ9Y644 331 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 VWFP04275 2813 aa9.07□□□□□ -0.96
HLA-DOB-208ENST00000475235 SAA2-SAA4A0A096LPE2 208 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 NAP1L6A6NFF2 107 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 F5H768 121 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 SAA2P0DJI9 122 aaPredicted RBP9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 PSG1P11464 419 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 FGF9P31371 208 aaPredicted RBP9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 TFPI2P48307 235 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 HSD52Q0P140 79 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 KPRPQ5T749 579 aaPredicted RBP9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 ZNF57Q68EA5 555 aaPredicted RBP9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 C10orf99Q6UWK7 81 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 Q6ZPA2 131 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 ZNF329Q86UD4 541 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 FAM71E2Q8N5Q1 922 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 STPG4Q8N801 248 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 WFDC9Q8NEX5 89 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 PTX4Q96A99 478 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 NABP2Q9BQ15 211 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 SRD5A3Q9H8P0 318 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 FKBP11Q9NYL4 201 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 KIAA2026Q5HYC2 2103 aa9.06□□□□□ -0.96
HLA-DOB-208ENST00000475235 SHISA3A0PJX4 238 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 TMEM189A5PLL7 270 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 CD33P20138 364 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 RPL24P83731 157 aaKnown RBP9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 SMAGPQ0VAQ4 97 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 MMDQ15546 238 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 BEAN1Q3B7T3 259 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 OXLD1Q5BKU9 147 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 C6orf226Q5I0X4 101 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 OR4B1Q8NGF8 309 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 OR10G4Q8NGN3 311 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 DNAJC30Q96LL9 226 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 P2RX4Q99571 388 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 HDHD3Q9BSH5 251 aaPredicted RBP9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 CABLES2Q9BTV7 478 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 MRPL20Q9BYC9 149 aaKnown RBP9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 ETV7Q9Y603 341 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 H7BYZ3 331 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 HLA-AP01891 365 aaKnown RBP9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 VDAC1P21796 283 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 KIR2DS1Q14954 304 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 C5orf17Q8NAS9 161 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 KIR2DL5BQ8NHK3 375 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 FCAMRQ8WWV6 532 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 CTDSP1Q9GZU7 261 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 TXNL4BQ9NX01 149 aaKnown RBP9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 ZNF107Q9UII5 783 aaPredicted RBP9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 LINC00527Q9UJ94 153 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 ZNF580Q9UK33 172 aa9.05□□□□□ -0.96
HLA-DOB-208ENST00000475235 A0A087WX48 190 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms