RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 TSC22D2O75157 780 aa12.23□□□□□ -0.45
ATG4B-216ENST00000475195 IL4P05112 153 aa12.23□□□□□ -0.45
ATG4B-216ENST00000475195 HNRNPCP07910 306 aaKnown RBP eCLIP12.23□□□□□ -0.457e-14■■□□□ 12
ATG4B-216ENST00000475195 ZNF90Q03938 601 aa12.23□□□□□ -0.45
ATG4B-216ENST00000475195 C16orf54Q6UWD8 224 aa12.23□□□□□ -0.45
ATG4B-216ENST00000475195 NRARPQ7Z6K4 114 aa12.23□□□□□ -0.45
ATG4B-216ENST00000475195 C2orf50Q96LR7 162 aa12.23□□□□□ -0.45
ATG4B-216ENST00000475195 SPATA25Q9BR10 227 aa12.23□□□□□ -0.45
ATG4B-216ENST00000475195 MS4A6AQ9H2W1 248 aa12.23□□□□□ -0.45
ATG4B-216ENST00000475195 RCL1Q9Y2P8 373 aaKnown RBP12.23□□□□□ -0.45
ATG4B-216ENST00000475195 IGHV3-66A0A0C4DH42 116 aa12.22□□□□□ -0.45
ATG4B-216ENST00000475195 C7orf66A4D0T2 115 aa12.22□□□□□ -0.45
ATG4B-216ENST00000475195 H3BP45 60 aa12.22□□□□□ -0.45
ATG4B-216ENST00000475195 CCSO14618 274 aa12.22□□□□□ -0.45
ATG4B-216ENST00000475195 P2RY1P47900 373 aa12.22□□□□□ -0.45
ATG4B-216ENST00000475195 ENKURQ8TC29 256 aa12.22□□□□□ -0.45
ATG4B-216ENST00000475195 NARS2Q96I59 477 aaKnown RBP12.22□□□□□ -0.45
ATG4B-216ENST00000475195 MARVELD1Q9BSK0 173 aa12.22□□□□□ -0.45
ATG4B-216ENST00000475195 C11orf1Q9H5F2 150 aa12.22□□□□□ -0.45
ATG4B-216ENST00000475195 PAIP2BQ9ULR5 123 aaKnown RBP12.22□□□□□ -0.45
ATG4B-216ENST00000475195 LOC102724200A0A096LPH7 203 aaPredicted RBP12.21□□□□□ -0.45
ATG4B-216ENST00000475195 SNRPGP15A8MWD9 76 aa12.21□□□□□ -0.45
ATG4B-216ENST00000475195 FNDC10F2Z333 226 aa12.21□□□□□ -0.45
ATG4B-216ENST00000475195 SSSCA1O60232 199 aa12.21□□□□□ -0.45
ATG4B-216ENST00000475195 CFDP00746 253 aaPredicted RBP12.21□□□□□ -0.45
ATG4B-216ENST00000475195 FABP1P07148 127 aa12.21□□□□□ -0.45
ATG4B-216ENST00000475195 OR8G2PQ6IF36 304 aa12.21□□□□□ -0.45
ATG4B-216ENST00000475195 TMEM144Q7Z5S9 345 aa12.21□□□□□ -0.45
ATG4B-216ENST00000475195 GBGT1Q8N5D6 347 aa12.21□□□□□ -0.45
ATG4B-216ENST00000475195 GLMPQ8WWB7 406 aa12.21□□□□□ -0.45
ATG4B-216ENST00000475195 RNF125Q96EQ8 232 aa12.21□□□□□ -0.45
ATG4B-216ENST00000475195 GRAMD2BQ96HH9 432 aa12.21□□□□□ -0.45
ATG4B-216ENST00000475195 UBQLN2Q9UHD9 624 aa12.21□□□□□ -0.45
ATG4B-216ENST00000475195 RABAC1Q9UI14 185 aa12.21□□□□□ -0.45
ATG4B-216ENST00000475195 IGKV3-7A0A075B6H7 116 aa12.2□□□□□ -0.46
ATG4B-216ENST00000475195 PRAF2O60831 178 aa12.2□□□□□ -0.46
ATG4B-216ENST00000475195 SCGB1D2O95969 90 aa12.2□□□□□ -0.46
ATG4B-216ENST00000475195 AP2S1P53680 142 aaPredicted RBP12.2□□□□□ -0.46
ATG4B-216ENST00000475195 GGTLC1Q9BX51 225 aa12.2□□□□□ -0.46
ATG4B-216ENST00000475195 GPN1Q9HCN4 374 aaPredicted RBP12.2□□□□□ -0.46
ATG4B-216ENST00000475195 C5orf51A6NDU8 294 aa12.19□□□□□ -0.46
ATG4B-216ENST00000475195 HELTA6NFD8 242 aa12.19□□□□□ -0.46
ATG4B-216ENST00000475195 INMT-MINDY4F8WBC2 141 aa12.19□□□□□ -0.46
ATG4B-216ENST00000475195 K7EPK0 472 aa12.19□□□□□ -0.46
ATG4B-216ENST00000475195 K7EQG2 157 aa12.19□□□□□ -0.46
ATG4B-216ENST00000475195 TFPI2P48307 235 aa12.19□□□□□ -0.46
ATG4B-216ENST00000475195 EIF2B2P49770 351 aaKnown RBP12.19□□□□□ -0.46
ATG4B-216ENST00000475195 DEFA1P59665 94 aa12.19□□□□□ -0.46
ATG4B-216ENST00000475195 DEFA3P59666 94 aa12.19□□□□□ -0.46
ATG4B-216ENST00000475195 ACOT7LQ6ZUV0 252 aa12.19□□□□□ -0.46
ATG4B-216ENST00000475195 STPG3Q8N7X2 389 aa12.19□□□□□ -0.46
ATG4B-216ENST00000475195 DCANP1Q8TF63 244 aa12.19□□□□□ -0.46
ATG4B-216ENST00000475195 MAP6D1Q9H9H5 199 aa12.19□□□□□ -0.46
ATG4B-216ENST00000475195 KIR2DL5BA0A0G2JN68 375 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 KIR2DL5BA0A0G2JPC4 375 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 FAM25EA8MYX2 175 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 DNASE2O00115 360 aaPredicted RBP12.18□□□□□ -0.46
ATG4B-216ENST00000475195 CCNKO75909 580 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 METTL15P1P0C7V9 234 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 RPL11P62913 178 aaKnown RBP12.18□□□□□ -0.46
ATG4B-216ENST00000475195 DLK1P80370 383 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 C1orf194Q5T5A4 169 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 GSG1LQ6UXU4 331 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 TMEM182Q6ZP80 229 aaPredicted RBP12.18□□□□□ -0.46
ATG4B-216ENST00000475195 APRG1Q8IVJ8 170 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 KIR2DL5AQ8N109 375 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 OR10P1Q8NGE3 313 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 KIR2DL5BQ8NHK3 375 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 GGACTQ9BVM4 153 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 EDA2RQ9HAV5 297 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 NPVFQ9HCQ7 196 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 PFDN2Q9UHV9 154 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 SLC45A2Q9UMX9 530 aa12.18□□□□□ -0.46
ATG4B-216ENST00000475195 DEDDO75618 318 aa12.17□□□□□ -0.46
ATG4B-216ENST00000475195 NUP62P37198 522 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-216ENST00000475195 ARL16Q0P5N6 197 aa12.17□□□□□ -0.46
ATG4B-216ENST00000475195 WFDC3Q8IUB2 231 aa12.17□□□□□ -0.46
ATG4B-216ENST00000475195 FAM24BQ8N5W8 94 aa12.17□□□□□ -0.46
ATG4B-216ENST00000475195 SEPSECSQ9HD40 501 aaKnown RBP12.17□□□□□ -0.46
ATG4B-216ENST00000475195 UBE2CO00762 179 aa12.16□□□□□ -0.46
ATG4B-216ENST00000475195 OR2F1Q13607 317 aa12.16□□□□□ -0.46
ATG4B-216ENST00000475195 Q6ZWC4 215 aa12.16□□□□□ -0.46
ATG4B-216ENST00000475195 PBDC1Q9BVG4 233 aa12.16□□□□□ -0.46
ATG4B-216ENST00000475195 LSM5Q9Y4Y9 91 aaKnown RBP12.16□□□□□ -0.46
ATG4B-216ENST00000475195 DNAH7Q8WXX0 4024 aa12.15□□□□□ -0.46
ATG4B-216ENST00000475195 APOC4P55056 127 aa12.15□□□□□ -0.46
ATG4B-216ENST00000475195 LYZP61626 148 aa12.15□□□□□ -0.46
ATG4B-216ENST00000475195 AKR1C1Q04828 323 aa12.15□□□□□ -0.46
ATG4B-216ENST00000475195 RAB32Q13637 225 aa12.15□□□□□ -0.46
ATG4B-216ENST00000475195 ZNF124Q15973 351 aa12.15□□□□□ -0.46
ATG4B-216ENST00000475195 BPIFCQ8NFQ6 507 aa12.15□□□□□ -0.46
ATG4B-216ENST00000475195 STXBP6Q8NFX7 210 aa12.15□□□□□ -0.46
ATG4B-216ENST00000475195 NRN1Q9NPD7 142 aa12.15□□□□□ -0.46
ATG4B-216ENST00000475195 L7N2F9 121 aa12.14□□□□□ -0.47
ATG4B-216ENST00000475195 GATA2P23769 480 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-216ENST00000475195 DEFB131AP59861 70 aa12.14□□□□□ -0.47
ATG4B-216ENST00000475195 PLP1P60201 277 aa12.14□□□□□ -0.47
ATG4B-216ENST00000475195 SELENOTP62341 195 aa12.14□□□□□ -0.47
ATG4B-216ENST00000475195 VAMP2P63027 116 aa12.14□□□□□ -0.47
ATG4B-216ENST00000475195 SIGLEC15Q6ZMC9 328 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms