RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 FAM106AQ4KMX7 169 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 ZNF600Q6ZNG1 722 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 TMEM144Q7Z5S9 345 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 OR10P1Q8NGE3 313 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 OR1S2Q8NGQ3 325 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 ST6GAL2Q96JF0 529 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 SLC35E1Q96K37 410 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 TRGV9Q99603 122 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 C20orf24Q9BUV8 137 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 WFDC1Q9HC57 220 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 MLXQ9UH92 298 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 U3KQE9 123 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 IGHV3OR16-13A0A075B7E8 117 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 TRAV30A0A087WSZ9 112 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 IGHV3-49A0A0A0MS15 119 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 IGHV3-74A0A0B4J1X5 117 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 WI2-2373I1.2A0A1W2PRP0 233 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 RNF222A6NCQ9 220 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 FNDC10F2Z333 226 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 SAP30O75446 220 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 TOMM40O96008 361 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 RD3LP0DJH9 198 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 PVALBP20472 110 aaPredicted RBP5.26□□□□□ -1.57
LIMD1-204ENST00000474665 ELLP55199 621 aaPredicted RBP5.26□□□□□ -1.57
LIMD1-204ENST00000474665 RELQ04864 619 aaPredicted RBP5.26□□□□□ -1.57
LIMD1-204ENST00000474665 CD300CQ08708 224 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 OR2F1Q13607 317 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 DEFB114Q30KQ6 69 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 C9orf66Q5T8R8 295 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 OR11H4Q8NGC9 324 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 OR2T35Q8NGX2 323 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 MUC7Q8TAX7 377 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 MGST2Q99735 147 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 MCRIP2Q9BUT9 160 aaKnown RBP5.26□□□□□ -1.57
LIMD1-204ENST00000474665 GGACTQ9BVM4 153 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 DAZ1Q9NQZ3 744 aaKnown RBP5.26□□□□□ -1.57
LIMD1-204ENST00000474665 SMPXQ9UHP9 88 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 SLC45A2Q9UMX9 530 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 U3KQK5 164 aa5.26□□□□□ -1.57
LIMD1-204ENST00000474665 HUWE1Q7Z6Z7 4374 aaKnown RBP5.25□□□□□ -1.57
LIMD1-204ENST00000474665 IGHV3-66A0A0C4DH42 116 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 IGHV7-4-1A0A0J9YVY3 117 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 SMCO3A2RU48 225 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 ZFP92A6NM28 416 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 ZNF785A8K8V0 405 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 CHEK1O14757 476 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 YIF1AO95070 293 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 RLN2P04090 185 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 LINC00869P0C866 280 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 CRYBB3P26998 211 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 RPL12P30050 165 aaKnown RBP5.25□□□□□ -1.57
LIMD1-204ENST00000474665 S100A11P31949 105 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 INSL3P51460 131 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 AKR1C1Q04828 323 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 CLINT1Q14677 625 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 CD300EQ496F6 205 aaPredicted RBP5.25□□□□□ -1.57
LIMD1-204ENST00000474665 FAM90A2PQ658T7 463 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 BTNL8Q6UX41 500 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 PATE2Q6UY27 113 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 TMEM61Q8N0U2 210 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 OR51G1Q8NGK1 321 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 OR5C1Q8NGR4 320 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 ASB13Q8WXK3 278 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 ST8SIA2Q92186 375 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 RNF125Q96EQ8 232 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 C17orf77Q96MU5 243 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 B9D2Q9BPU9 175 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 ELOVL1Q9BW60 279 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 VSIRQ9H7M9 311 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 WDR83OSQ9Y284 106 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 UFC1Q9Y3C8 167 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 HSPB11Q9Y547 144 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 RFNGQ9Y644 331 aa5.25□□□□□ -1.57
LIMD1-204ENST00000474665 hCG_2014768A0A024R1R8 64 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 AGPAT2O15120 278 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 IL4P05112 153 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 BAXQ07812 192 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 CYP2G1PQ6ZSU1 146 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 STX12Q86Y82 276 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 Q8N1Y9 231 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 THAP6Q8TBB0 222 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 Q8WTZ3 238 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 MARC2Q969Z3 335 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 AQP10Q96PS8 301 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 PRR25Q96S07 402 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 RNF2Q99496 336 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 TMEM147Q9BVK8 224 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 RHPN1-AS1Q9BWJ2 59 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 GGTLC1Q9BX51 225 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 SMIM3Q9BZL3 60 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 SLC25A31Q9H0C2 315 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 NPVFQ9HCQ7 196 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 UQCC1Q9NVA1 299 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 MRPL27Q9P0M9 148 aaKnown RBP5.24□□□□□ -1.57
LIMD1-204ENST00000474665 PEMTQ9UBM1 199 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 TNFSF18Q9UNG2 199 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 KIAA1109Q2LD37 5005 aa5.24□□□□□ -1.57
LIMD1-204ENST00000474665 FXYD6-FXYD2A0A087WZ82 144 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 UBE2L5PA0A1B0GUS4 154 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 BUB3O43684 328 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms