RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 BCL2L15Q5TBC7 163 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 TEN1Q86WV5 123 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 OR2T35Q8NGX2 323 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 ARL5BQ96KC2 179 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 C14orf105Q9NVL8 296 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 SBF1O95248 1867 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 DENND4CQ5VZ89 1909 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 TRBV6-4A0A1B0GX49 114 aa0.53□□□□□ -2.32
ECHDC1-213ENST00000474240 TCRBV4S1A1TA0A5B7 111 aa0.53□□□□□ -2.32
ECHDC1-213ENST00000474240 CNBPP62633 177 aaKnown RBP0.53□□□□□ -2.32
ECHDC1-213ENST00000474240 KRR1Q13601 381 aaKnown RBP0.53□□□□□ -2.32
ECHDC1-213ENST00000474240 C4orf22Q6V702 233 aa0.53□□□□□ -2.32
ECHDC1-213ENST00000474240 SLAMF6Q96DU3 332 aa0.53□□□□□ -2.32
ECHDC1-213ENST00000474240 KIFC1Q9BW19 673 aa0.53□□□□□ -2.32
ECHDC1-213ENST00000474240 MED29Q9NX70 200 aa0.53□□□□□ -2.32
ECHDC1-213ENST00000474240 GLTPQ9NZD2 209 aa0.53□□□□□ -2.32
ECHDC1-213ENST00000474240 LY96Q9Y6Y9 160 aa0.53□□□□□ -2.32
ECHDC1-213ENST00000474240 FAM236DA0A1B0GTK5 79 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 H3BRM9 83 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 CCL16O15467 120 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 TIMM17BO60830 172 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 GADD45GO95257 159 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 CNIH1O95406 144 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 IGLV3-1P01715 115 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 RPS17P08708 135 aaKnown RBP0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 FAM236CP0DP71 79 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 DEFB113Q30KQ7 82 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 C12orf74Q32Q52 190 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 HAGHLQ6PII5 290 aaPredicted RBP0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 Q6Q795 121 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 LINC00575Q6W349 94 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 Q8N6K4 173 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 OR51A2Q8NGJ7 313 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 OR10AC1Q8NH08 325 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 GNPDA2Q8TDQ7 276 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 PRADC1Q9BSG0 188 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 RNF122Q9H9V4 155 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 E9PCH4 1651 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 CEP192Q8TEP8 1941 aa0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 NCOA6Q14686 2063 aaPredicted RBP0.52□□□□□ -2.33
ECHDC1-213ENST00000474240 TLCD2A6NGC4 264 aa0.51□□□□□ -2.33
ECHDC1-213ENST00000474240 CCL25O15444 150 aa0.51□□□□□ -2.33
ECHDC1-213ENST00000474240 PIK3C2GO75747 1445 aa0.51□□□□□ -2.33
ECHDC1-213ENST00000474240 ERP29P30040 261 aaKnown RBP0.51□□□□□ -2.33
ECHDC1-213ENST00000474240 TMEM97Q5BJF2 176 aa0.51□□□□□ -2.33
ECHDC1-213ENST00000474240 FMN1Q68DA7 1419 aa0.51□□□□□ -2.33
ECHDC1-213ENST00000474240 OR5D14Q8NGL3 314 aa0.51□□□□□ -2.33
ECHDC1-213ENST00000474240 SLC25A40Q8TBP6 338 aa0.51□□□□□ -2.33
ECHDC1-213ENST00000474240 NMNAT1Q9HAN9 279 aaPredicted RBP0.51□□□□□ -2.33
ECHDC1-213ENST00000474240 EML5Q05BV3 1969 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 ROBO3Q96MS0 1386 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 IGHV1-58A0A0C4DH39 117 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 A8MWV9 139 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 F8W1H4 67 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 KPNA3O00505 521 aaPredicted RBP0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 NDUFB3O43676 98 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 NUPR1O60356 82 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 GGCTO75223 188 aaKnown RBP0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 NIPSNAP2O75323 286 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 ZNF682O95780 498 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 FXYD6P3P58550 94 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 DYNLT1P63172 113 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 IFT20Q8IY31 132 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 OR52L1Q8NGH7 329 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 PSMF1Q92530 271 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 SLC25A21Q9BQT8 299 aaPredicted RBP0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 TLNRD1Q9H1K6 362 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 TMEM138Q9NPI0 162 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 TAS2R7Q9NYW3 318 aa0.5□□□□□ -2.33
ECHDC1-213ENST00000474240 RIMBP3CA6NJZ7 1639 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 RIMBP3BA6NNM3 1639 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 RIMBP3Q9UFD9 1639 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 IFNA7P01567 189 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 EFNA4P52798 201 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 MYL6P60660 151 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 AESQ08117 197 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 OR52R1Q8NGF1 315 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 WFDC5Q8TCV5 224 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 IMUPQ9GZP8 106 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 PARVGQ9HBI0 331 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 IDI2-AS1Q9NZ38 188 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 PRELID3BQ9Y3B1 194 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 HECW2Q9P2P5 1572 aa0.49□□□□□ -2.33
ECHDC1-213ENST00000474240 TNRC6AQ8NDV7 1962 aaKnown RBP0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 ADCY9O60503 1353 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 FAM159BA6NKW6 160 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 C17orf112F2Z3M2 114 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 CST8O60676 142 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 ERC2-IT1O76042 136 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 LYPLA2O95372 231 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 PIGPP57054 158 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 RANP62826 216 aaKnown RBP0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 ITGB3BPQ13352 177 aaPredicted RBP0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 RGS21Q2M5E4 152 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 LIN52Q52LA3 116 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 SPRNQ5BIV9 151 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 C22orf39Q6P5X5 142 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 LINC00052Q96N35 136 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 PBOV1Q9GZY1 135 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms