RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 P2RY1P47900 373 aa14.06□□□□□ -0.16
PTCD3-210ENST00000473829 ACOT7LQ6ZUV0 252 aa14.06□□□□□ -0.16
PTCD3-210ENST00000473829 THAP8Q8NA92 274 aa14.06□□□□□ -0.16
PTCD3-210ENST00000473829 OR51G1Q8NGK1 321 aa14.06□□□□□ -0.16
PTCD3-210ENST00000473829 SMIM8Q96KF7 97 aa14.06□□□□□ -0.16
PTCD3-210ENST00000473829 MS4A6AQ9H2W1 248 aa14.06□□□□□ -0.16
PTCD3-210ENST00000473829 TMEM231Q9H6L2 316 aa14.06□□□□□ -0.16
PTCD3-210ENST00000473829 NBEAL2Q6ZNJ1 2754 aa14.05□□□□□ -0.16
PTCD3-210ENST00000473829 A0A1W2PS18 150 aa14.05□□□□□ -0.16
PTCD3-210ENST00000473829 FAM25EA8MYX2 175 aa14.05□□□□□ -0.16
PTCD3-210ENST00000473829 IL5P05113 134 aa14.05□□□□□ -0.16
PTCD3-210ENST00000473829 ZNF124Q15973 351 aa14.05□□□□□ -0.16
PTCD3-210ENST00000473829 WFDC3Q8IUB2 231 aa14.05□□□□□ -0.16
PTCD3-210ENST00000473829 FAM24BQ8N5W8 94 aa14.05□□□□□ -0.16
PTCD3-210ENST00000473829 RNF125Q96EQ8 232 aa14.05□□□□□ -0.16
PTCD3-210ENST00000473829 SPATA25Q9BR10 227 aa14.05□□□□□ -0.16
PTCD3-210ENST00000473829 DNAH7Q8WXX0 4024 aa14.05□□□□□ -0.16
PTCD3-210ENST00000473829 CD5P06127 495 aa14.04□□□□□ -0.16
PTCD3-210ENST00000473829 RPL11P62913 178 aaKnown RBP14.04□□□□□ -0.16
PTCD3-210ENST00000473829 OR2F1Q13607 317 aa14.04□□□□□ -0.16
PTCD3-210ENST00000473829 OR8G2PQ6IF36 304 aa14.04□□□□□ -0.16
PTCD3-210ENST00000473829 TMEM14EPQ6UXP3 125 aa14.04□□□□□ -0.16
PTCD3-210ENST00000473829 APRG1Q8IVJ8 170 aa14.04□□□□□ -0.16
PTCD3-210ENST00000473829 GLMPQ8WWB7 406 aa14.04□□□□□ -0.16
PTCD3-210ENST00000473829 RAB40CQ96S21 281 aa14.04□□□□□ -0.16
PTCD3-210ENST00000473829 TRGV9Q99603 122 aa14.04□□□□□ -0.16
PTCD3-210ENST00000473829 FAM110AQ9BQ89 295 aa14.04□□□□□ -0.16
PTCD3-210ENST00000473829 MAP6D1Q9H9H5 199 aa14.04□□□□□ -0.16
PTCD3-210ENST00000473829 C7orf66A4D0T2 115 aa14.03□□□□□ -0.16
PTCD3-210ENST00000473829 C5orf51A6NDU8 294 aa14.03□□□□□ -0.16
PTCD3-210ENST00000473829 METTL15P1P0C7V9 234 aa14.03□□□□□ -0.16
PTCD3-210ENST00000473829 C16orf54Q6UWD8 224 aa14.03□□□□□ -0.16
PTCD3-210ENST00000473829 NARS2Q96I59 477 aaKnown RBP14.03□□□□□ -0.16
PTCD3-210ENST00000473829 PBDC1Q9BVG4 233 aa14.03□□□□□ -0.16
PTCD3-210ENST00000473829 GGTLC1Q9BX51 225 aa14.03□□□□□ -0.16
PTCD3-210ENST00000473829 RABAC1Q9UI14 185 aa14.03□□□□□ -0.16
PTCD3-210ENST00000473829 LOC102724200A0A096LPH7 203 aaPredicted RBP14.02□□□□□ -0.17
PTCD3-210ENST00000473829 K7EPK0 472 aa14.02□□□□□ -0.17
PTCD3-210ENST00000473829 TSC22D2O75157 780 aa14.02□□□□□ -0.17
PTCD3-210ENST00000473829 TAS2R30P59541 319 aa14.02□□□□□ -0.17
PTCD3-210ENST00000473829 STPG3Q8N7X2 389 aa14.02□□□□□ -0.17
PTCD3-210ENST00000473829 STXBP6Q8NFX7 210 aa14.02□□□□□ -0.17
PTCD3-210ENST00000473829 GRAMD2BQ96HH9 432 aa14.02□□□□□ -0.17
PTCD3-210ENST00000473829 C2orf50Q96LR7 162 aa14.02□□□□□ -0.17
PTCD3-210ENST00000473829 C11orf1Q9H5F2 150 aa14.02□□□□□ -0.17
PTCD3-210ENST00000473829 LSM5Q9Y4Y9 91 aaKnown RBP14.02□□□□□ -0.17
PTCD3-210ENST00000473829 TRAV2A0A0B4J234 112 aa14.01□□□□□ -0.17
PTCD3-210ENST00000473829 DNASE2O00115 360 aaPredicted RBP14.01□□□□□ -0.17
PTCD3-210ENST00000473829 BUB3O43684 328 aa14.01□□□□□ -0.17
PTCD3-210ENST00000473829 LYZP61626 148 aa14.01□□□□□ -0.17
PTCD3-210ENST00000473829 PAFAH1B2P68402 229 aa14.01□□□□□ -0.17
PTCD3-210ENST00000473829 AKR1C1Q04828 323 aa14.01□□□□□ -0.17
PTCD3-210ENST00000473829 ARL16Q0P5N6 197 aa14.01□□□□□ -0.17
PTCD3-210ENST00000473829 IL15RAQ13261 267 aa14.01□□□□□ -0.17
PTCD3-210ENST00000473829 TMEM182Q6ZP80 229 aaPredicted RBP14.01□□□□□ -0.17
PTCD3-210ENST00000473829 INMT-MINDY4F8WBC2 141 aa14□□□□□ -0.17
PTCD3-210ENST00000473829 K7EQG2 157 aa14□□□□□ -0.17
PTCD3-210ENST00000473829 GATA2P23769 480 aaPredicted RBP14□□□□□ -0.17
PTCD3-210ENST00000473829 EIF2B2P49770 351 aaKnown RBP14□□□□□ -0.17
PTCD3-210ENST00000473829 RRAS2P62070 204 aaPredicted RBP14□□□□□ -0.17
PTCD3-210ENST00000473829 GSG1LQ6UXU4 331 aa14□□□□□ -0.17
PTCD3-210ENST00000473829 DCANP1Q8TF63 244 aa14□□□□□ -0.17
PTCD3-210ENST00000473829 MARVELD1Q9BSK0 173 aa14□□□□□ -0.17
PTCD3-210ENST00000473829 SMCO3A2RU48 225 aa13.99□□□□□ -0.17
PTCD3-210ENST00000473829 FABP1P07148 127 aa13.99□□□□□ -0.17
PTCD3-210ENST00000473829 RPL35AP18077 110 aaKnown RBP13.99□□□□□ -0.17
PTCD3-210ENST00000473829 DEFA1P59665 94 aa13.99□□□□□ -0.17
PTCD3-210ENST00000473829 DEFA3P59666 94 aa13.99□□□□□ -0.17
PTCD3-210ENST00000473829 DLK1P80370 383 aa13.99□□□□□ -0.17
PTCD3-210ENST00000473829 TMEM144Q7Z5S9 345 aa13.99□□□□□ -0.17
PTCD3-210ENST00000473829 GPN1Q9HCN4 374 aaPredicted RBP13.99□□□□□ -0.17
PTCD3-210ENST00000473829 SNRPGP15A8MWD9 76 aa13.98□□□□□ -0.17
PTCD3-210ENST00000473829 DEFB131AP59861 70 aa13.98□□□□□ -0.17
PTCD3-210ENST00000473829 RAB32Q13637 225 aa13.98□□□□□ -0.17
PTCD3-210ENST00000473829 LEMD1Q68G75 181 aa13.98□□□□□ -0.17
PTCD3-210ENST00000473829 EDA2RQ9HAV5 297 aa13.98□□□□□ -0.17
PTCD3-210ENST00000473829 HELTA6NFD8 242 aa13.97□□□□□ -0.17
PTCD3-210ENST00000473829 L7N2F9 121 aa13.97□□□□□ -0.17
PTCD3-210ENST00000473829 GOSR2O14653 212 aa13.97□□□□□ -0.17
PTCD3-210ENST00000473829 PRAF2O60831 178 aa13.97□□□□□ -0.17
PTCD3-210ENST00000473829 SIX6O95475 246 aa13.97□□□□□ -0.17
PTCD3-210ENST00000473829 ZNF688P0C7X2 276 aa13.97□□□□□ -0.17
PTCD3-210ENST00000473829 CMC4P56277 68 aaPredicted RBP13.97□□□□□ -0.17
PTCD3-210ENST00000473829 S100A10P60903 97 aa13.97□□□□□ -0.17
PTCD3-210ENST00000473829 VAMP2P63027 116 aa13.97□□□□□ -0.17
PTCD3-210ENST00000473829 SIGLEC15Q6ZMC9 328 aa13.97□□□□□ -0.17
PTCD3-210ENST00000473829 OR10P1Q8NGE3 313 aa13.97□□□□□ -0.17
PTCD3-210ENST00000473829 CYP2G1PQ6ZSU1 146 aa13.96□□□□□ -0.17
PTCD3-210ENST00000473829 KMT2CQ8NEZ4 4911 aaKnown RBP13.95□□□□□ -0.18
PTCD3-210ENST00000473829 FAM24AA6NFZ4 105 aa13.95□□□□□ -0.18
PTCD3-210ENST00000473829 FNDC10F2Z333 226 aa13.95□□□□□ -0.18
PTCD3-210ENST00000473829 BCAP31P51572 246 aa13.95□□□□□ -0.18
PTCD3-210ENST00000473829 CAV2P51636 162 aa13.95□□□□□ -0.18
PTCD3-210ENST00000473829 APOC4P55056 127 aa13.95□□□□□ -0.18
PTCD3-210ENST00000473829 BPIFCQ8NFQ6 507 aa13.95□□□□□ -0.18
PTCD3-210ENST00000473829 OVOL2Q9BRP0 275 aa13.95□□□□□ -0.18
PTCD3-210ENST00000473829 NRN1Q9NPD7 142 aa13.95□□□□□ -0.18
PTCD3-210ENST00000473829 MGAT4CQ9UBM8 478 aa13.95□□□□□ -0.18
PTCD3-210ENST00000473829 KIR2DL5BA0A0G2JN68 375 aa13.94□□□□□ -0.18
PTCD3-210ENST00000473829 KIR2DL5BA0A0G2JPC4 375 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms