RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 RD3LP0DJH9 198 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 NUP62P37198 522 aaPredicted RBP9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 P2RY1P47900 373 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 TFPI2P48307 235 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 RPL11P62913 178 aaKnown RBP9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 GAMTQ14353 236 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 KIR2DL5AQ8N109 375 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 LILRB2Q8N423 598 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 KIR2DL5BQ8NHK3 375 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 MITD1Q8WV92 249 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 MS4A6AQ9H2W1 248 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 RETNQ9HD89 108 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 KMT2AQ03164 3969 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 IGKV3-7A0A075B6H7 116 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 IGHV3-66A0A0C4DH42 116 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 HELTA6NFD8 242 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 ZFP92A6NM28 416 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 WRBO00258 174 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 PSG1P11464 419 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 NKX2-1P43699 371 aaPredicted RBP9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 AP2S1P53680 142 aaPredicted RBP9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 USF2Q15853 346 aaPredicted RBP9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 Q6ZWC4 215 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 GBGT1Q8N5D6 347 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 OR51G1Q8NGK1 321 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 OR4D5Q8NGN0 318 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 MAGT1Q9H0U3 335 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 MAP6D1Q9H9H5 199 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 PFDN2Q9UHV9 154 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 RABAC1Q9UI14 185 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 TP53TG1Q9Y2A0 90 aa9.59□□□□□ -0.87
SHROOM3-204ENST00000473602 DNAH10Q8IVF4 4471 aa9.58□□□□□ -0.88
SHROOM3-204ENST00000473602 MPTX1A8MV57 137 aa9.58□□□□□ -0.88
SHROOM3-204ENST00000473602 PRSS46E5RG02 174 aa9.58□□□□□ -0.88
SHROOM3-204ENST00000473602 OR8G2PQ6IF36 304 aa9.58□□□□□ -0.88
SHROOM3-204ENST00000473602 C16orf54Q6UWD8 224 aa9.58□□□□□ -0.88
SHROOM3-204ENST00000473602 GLMPQ8WWB7 406 aa9.58□□□□□ -0.88
SHROOM3-204ENST00000473602 RNF125Q96EQ8 232 aa9.58□□□□□ -0.88
SHROOM3-204ENST00000473602 TRGV9Q99603 122 aa9.58□□□□□ -0.88
SHROOM3-204ENST00000473602 WDR12Q9GZL7 423 aaKnown RBP9.58□□□□□ -0.88
SHROOM3-204ENST00000473602 NUDT15Q9NV35 164 aa9.58□□□□□ -0.88
SHROOM3-204ENST00000473602 PAIP2BQ9ULR5 123 aaKnown RBP9.58□□□□□ -0.88
SHROOM3-204ENST00000473602 STRAPQ9Y3F4 350 aaKnown RBP9.58□□□□□ -0.88
SHROOM3-204ENST00000473602 IGKV1D-37A0A075B6S9 117 aa9.57□□□□□ -0.88
SHROOM3-204ENST00000473602 K7EQG2 157 aa9.57□□□□□ -0.88
SHROOM3-204ENST00000473602 POLR2GP62487 172 aaKnown RBP eCLIP9.57□□□□□ -0.88
SHROOM3-204ENST00000473602 IAH1Q2TAA2 248 aaPredicted RBP9.57□□□□□ -0.88
SHROOM3-204ENST00000473602 SPANXN5Q5MJ07 72 aa9.57□□□□□ -0.88
SHROOM3-204ENST00000473602 MZT2BQ6NZ67 158 aa9.57□□□□□ -0.88
SHROOM3-204ENST00000473602 WFDC3Q8IUB2 231 aa9.57□□□□□ -0.88
SHROOM3-204ENST00000473602 APRG1Q8IVJ8 170 aa9.57□□□□□ -0.88
SHROOM3-204ENST00000473602 STPG3Q8N7X2 389 aa9.57□□□□□ -0.88
SHROOM3-204ENST00000473602 THAP8Q8NA92 274 aa9.57□□□□□ -0.88
SHROOM3-204ENST00000473602 STXBP6Q8NFX7 210 aa9.57□□□□□ -0.88
SHROOM3-204ENST00000473602 PPP1R14BQ96C90 147 aa9.57□□□□□ -0.88
SHROOM3-204ENST00000473602 PCLOQ9Y6V0 5065 aa9.57□□□□□ -0.88
SHROOM3-204ENST00000473602 TRAV6A0A075B6T7 132 aa9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 FAM240BA0A1B0GVZ2 78 aa9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 SNRPGP15A8MWD9 76 aa9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 H3BP45 60 aa9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 BUB3O43684 328 aa9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 CFDP00746 253 aaPredicted RBP9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 ASAH1Q13510 395 aa9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 ZNF846Q147U1 533 aa9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 ZNF431Q8TF32 576 aaPredicted RBP9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 DCANP1Q8TF63 244 aa9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 SMIM8Q96KF7 97 aa9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 RAB40CQ96S21 281 aa9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 OVOL2Q9BRP0 275 aa9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 PSENENQ9NZ42 101 aa9.56□□□□□ -0.88
SHROOM3-204ENST00000473602 SSSCA1O60232 199 aa9.55□□□□□ -0.88
SHROOM3-204ENST00000473602 H2AFB2P0C5Z0 115 aa9.55□□□□□ -0.88
SHROOM3-204ENST00000473602 RPL35AP18077 110 aaKnown RBP9.55□□□□□ -0.88
SHROOM3-204ENST00000473602 TAS2R30P59541 319 aa9.55□□□□□ -0.88
SHROOM3-204ENST00000473602 DEFB131AP59861 70 aa9.55□□□□□ -0.88
SHROOM3-204ENST00000473602 ZNF90Q03938 601 aa9.55□□□□□ -0.88
SHROOM3-204ENST00000473602 ZBTB8BQ8NAP8 495 aaPredicted RBP9.55□□□□□ -0.88
SHROOM3-204ENST00000473602 LINC00476Q8WZB0 136 aa9.55□□□□□ -0.88
SHROOM3-204ENST00000473602 PBDC1Q9BVG4 233 aa9.55□□□□□ -0.88
SHROOM3-204ENST00000473602 SEPSECSQ9HD40 501 aaKnown RBP9.55□□□□□ -0.88
SHROOM3-204ENST00000473602 TBC1D24Q9ULP9 559 aa9.55□□□□□ -0.88
SHROOM3-204ENST00000473602 IGKV1OR2-108A0A075B7D4 117 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 SPRY2O43597 315 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 TSC22D2O75157 780 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 UPK1BO75841 260 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 LY6G6CO95867 125 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 SCGB1D2O95969 90 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 AKR1C1Q04828 323 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 ZNF124Q15973 351 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 DEFB135Q30KP9 77 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 C1orf194Q5T5A4 169 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 SIGLEC15Q6ZMC9 328 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 ACOT7LQ6ZUV0 252 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 FAM24BQ8N5W8 94 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 RNF183Q96D59 192 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 CSTL1Q9H114 145 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 NRN1Q9NPD7 142 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 GSKIPQ9P0R6 139 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 FBXL17Q9UF56 701 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 SLC45A2Q9UMX9 530 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms