RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 ABHD14AQ9BUJ0 271 aa5.33□□□□□ -1.56
CKS1B-205ENST00000473344 C20orf24Q9BUV8 137 aa5.33□□□□□ -1.56
CKS1B-205ENST00000473344 RIMS4Q9H426 269 aaPredicted RBP5.33□□□□□ -1.56
CKS1B-205ENST00000473344 SEPSECSQ9HD40 501 aaKnown RBP5.33□□□□□ -1.56
CKS1B-205ENST00000473344 Q9N2K0 584 aa5.33□□□□□ -1.56
CKS1B-205ENST00000473344 KCNIP1Q9NZI2 227 aa5.33□□□□□ -1.56
CKS1B-205ENST00000473344 HSPB7Q9UBY9 170 aa5.33□□□□□ -1.56
CKS1B-205ENST00000473344 NAGKQ9UJ70 344 aa5.33□□□□□ -1.56
CKS1B-205ENST00000473344 A0A1W2PP11 408 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 MAP1LC3B2A6NCE7 125 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 CBY3A6NI87 242 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 C9JQL5 133 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 DIRAS3O95661 229 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 IGHV3-11P01762 117 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 SRP19P09132 144 aaKnown RBP5.32□□□□□ -1.56
CKS1B-205ENST00000473344 CNTFRP26992 372 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 TPPP2P59282 170 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 RAB11AP62491 216 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 BAXQ07812 192 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 IL15RAQ13261 267 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 OR5I1Q13606 314 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 IAH1Q2TAA2 248 aaPredicted RBP5.32□□□□□ -1.56
CKS1B-205ENST00000473344 MORN2Q502X0 79 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 TMEM41BQ5BJD5 291 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 OR8G2PQ6IF36 304 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 GTSCR1Q86UQ5 136 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 HAPLN4Q86UW8 402 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 ZNF738Q8NE65 137 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 OR1L1Q8NH94 360 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 IL17DQ8TAD2 202 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 FRZBQ92765 325 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 RITA1Q96K30 269 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 SLC35E1Q96K37 410 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 MS4A10Q96PG2 267 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 NABP2Q9BQ15 211 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 PYGO2Q9BRQ0 406 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 MRPL20Q9BYC9 149 aaKnown RBP5.32□□□□□ -1.56
CKS1B-205ENST00000473344 MAP1LC3BQ9GZQ8 125 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 GSKIPQ9P0R6 139 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 JPT1Q9UK76 154 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 ANAPC10Q9UM13 185 aa5.32□□□□□ -1.56
CKS1B-205ENST00000473344 TRAV9-1A0A075B6T8 112 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 A0A1B0GU03 582 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 ZNF705FA8MVS1 300 aaPredicted RBP5.31□□□□□ -1.56
CKS1B-205ENST00000473344 A8MZ25 164 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 H0Y980 276 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 H0YIZ8 118 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 ST8SIA3O43173 380 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 SOX15O60248 233 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 SCAF4O95104 1147 aaKnown RBP5.31□□□□□ -1.56
CKS1B-205ENST00000473344 NDUFA3O95167 84 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 HPRT1P00492 218 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 IGLV1-51P01701 117 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 TYMSP04818 313 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 IL6RP08887 468 aaPredicted RBP5.31□□□□□ -1.56
CKS1B-205ENST00000473344 SNRPCP09234 159 aaKnown RBP5.31□□□□□ -1.56
CKS1B-205ENST00000473344 ZNF705DP0CH99 300 aaPredicted RBP5.31□□□□□ -1.56
CKS1B-205ENST00000473344 ZNF705BP0CI00 300 aaPredicted RBP5.31□□□□□ -1.56
CKS1B-205ENST00000473344 DTYMKP23919 212 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 HRH1P35367 487 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 PPP1CCP36873 323 aaKnown RBP5.31□□□□□ -1.56
CKS1B-205ENST00000473344 RPL29P47914 159 aaKnown RBP5.31□□□□□ -1.56
CKS1B-205ENST00000473344 FHITP49789 147 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 CX3CL1P78423 397 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 UBE2V1Q13404 147 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 COX19Q49B96 90 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 PDZD11Q5EBL8 140 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 UNQ5815/PRO19632Q6UWF5 114 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 TOMM20LQ6UXN7 152 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 H1FOOQ8IZA3 346 aaPredicted RBP5.31□□□□□ -1.56
CKS1B-205ENST00000473344 Q8N1Y9 231 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 NPBQ8NG41 125 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 OR52L2PQ8NGH6 319 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 OR5B3Q8NH48 314 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 FAM213BQ8TBF2 198 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 GALMQ96C23 342 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 TP53RKQ96S44 253 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 ATG101Q9BSB4 218 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 AGMATQ9BSE5 352 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 VAMP8Q9BV40 100 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 SCRT1Q9BWW7 348 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 FBXL15Q9H469 300 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 DNAJC4Q9NNZ3 241 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 ZNF355PQ9NSJ1 428 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 C19orf73Q9NVV2 129 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 BET1LQ9NYM9 111 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 NAT8Q9UHE5 227 aa5.31□□□□□ -1.56
CKS1B-205ENST00000473344 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.31□□□□□ -1.56
CKS1B-205ENST00000473344 SAA2-SAA4A0A096LPE2 208 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 DUXBA0A1W2PPF3 345 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 MSGN1A6NI15 193 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 F6UZH7 168 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 H7BYZ3 331 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 RRHO14718 337 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 YPEL1O60688 119 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 PITX3O75364 302 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 TRGV3P03979 118 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 CTSDP07339 412 aaPredicted RBP5.3□□□□□ -1.56
CKS1B-205ENST00000473344 CXCL1P09341 107 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms