RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 MCFD2Q8NI22 146 aa11.12□□□□□ -0.63
VTI1A-203ENST00000472892 DTD1Q8TEA8 209 aa11.12□□□□□ -0.63
VTI1A-203ENST00000472892 ACY3Q96HD9 319 aa11.12□□□□□ -0.63
VTI1A-203ENST00000472892 RAB40CQ96S21 281 aa11.12□□□□□ -0.63
VTI1A-203ENST00000472892 RBKSQ9H477 322 aa11.12□□□□□ -0.63
VTI1A-203ENST00000472892 PSG1P11464 419 aa11.11□□□□□ -0.63
VTI1A-203ENST00000472892 ANXA3P12429 323 aa11.11□□□□□ -0.63
VTI1A-203ENST00000472892 KLF9Q13886 244 aaPredicted RBP11.11□□□□□ -0.63
VTI1A-203ENST00000472892 ACTL10Q5JWF8 245 aa11.11□□□□□ -0.63
VTI1A-203ENST00000472892 CSNK1G2-AS1Q8NCQ2 148 aa11.11□□□□□ -0.63
VTI1A-203ENST00000472892 HRH4Q9H3N8 390 aa11.11□□□□□ -0.63
VTI1A-203ENST00000472892 SEPSECSQ9HD40 501 aaKnown RBP11.11□□□□□ -0.63
VTI1A-203ENST00000472892 FBXL17Q9UF56 701 aa11.11□□□□□ -0.63
VTI1A-203ENST00000472892 ZNF705EA8MWA4 302 aaPredicted RBP11.1□□□□□ -0.63
VTI1A-203ENST00000472892 NOL3O60936 208 aaKnown RBP11.1□□□□□ -0.63
VTI1A-203ENST00000472892 RBMY1A1P0DJD3 496 aaKnown RBP11.1□□□□□ -0.63
VTI1A-203ENST00000472892 RBMY1CP0DJD4 496 aa11.1□□□□□ -0.63
VTI1A-203ENST00000472892 MIFP14174 115 aa11.1□□□□□ -0.63
VTI1A-203ENST00000472892 C4BPBP20851 252 aa11.1□□□□□ -0.63
VTI1A-203ENST00000472892 GPX4P36969 197 aaPredicted RBP11.1□□□□□ -0.63
VTI1A-203ENST00000472892 RBMY1FQ15415 496 aaKnown RBP11.1□□□□□ -0.63
VTI1A-203ENST00000472892 PSMG4Q5JS54 123 aa11.1□□□□□ -0.63
VTI1A-203ENST00000472892 LCE2CQ5TA81 110 aa11.1□□□□□ -0.63
VTI1A-203ENST00000472892 PIGBOS1A0A0B4J2F0 54 aa11.09□□□□□ -0.63
VTI1A-203ENST00000472892 FAM90A26D6RGX4 464 aa11.09□□□□□ -0.63
VTI1A-203ENST00000472892 PITX3O75364 302 aa11.09□□□□□ -0.63
VTI1A-203ENST00000472892 FAUP35544 74 aaKnown RBP11.09□□□□□ -0.63
VTI1A-203ENST00000472892 GAMTQ14353 236 aa11.09□□□□□ -0.63
VTI1A-203ENST00000472892 TMEM128Q5BJH2 165 aa11.09□□□□□ -0.63
VTI1A-203ENST00000472892 SIGLEC15Q6ZMC9 328 aa11.09□□□□□ -0.63
VTI1A-203ENST00000472892 RPP25LQ8N5L8 163 aaKnown RBP11.09□□□□□ -0.63
VTI1A-203ENST00000472892 OR51G1Q8NGK1 321 aa11.09□□□□□ -0.63
VTI1A-203ENST00000472892 OR1S1Q8NH92 325 aa11.09□□□□□ -0.63
VTI1A-203ENST00000472892 C2CD4CQ8TF44 421 aa11.09□□□□□ -0.63
VTI1A-203ENST00000472892 TRIM63Q969Q1 353 aa11.09□□□□□ -0.63
VTI1A-203ENST00000472892 NRN1Q9NPD7 142 aa11.09□□□□□ -0.63
VTI1A-203ENST00000472892 X6R8D5 127 aa11.09□□□□□ -0.63
VTI1A-203ENST00000472892 AGRNO00468 2067 aa11.08□□□□□ -0.63
VTI1A-203ENST00000472892 IGKV1D-37A0A075B6S9 117 aa11.08□□□□□ -0.64
VTI1A-203ENST00000472892 IGHV4-28A0A0C4DH34 117 aa11.08□□□□□ -0.64
VTI1A-203ENST00000472892 DUXBA0A1W2PPF3 345 aa11.08□□□□□ -0.64
VTI1A-203ENST00000472892 TCTAP57738 103 aa11.08□□□□□ -0.64
VTI1A-203ENST00000472892 AP3S2P59780 193 aa11.08□□□□□ -0.64
VTI1A-203ENST00000472892 SNRPD3P62318 126 aaKnown RBP11.08□□□□□ -0.64
VTI1A-203ENST00000472892 LRTM2Q8N967 370 aa11.08□□□□□ -0.64
VTI1A-203ENST00000472892 RNF125Q96EQ8 232 aa11.08□□□□□ -0.64
VTI1A-203ENST00000472892 C11orf94C9JXX5 98 aa11.07□□□□□ -0.64
VTI1A-203ENST00000472892 SLC25A6P12236 298 aa11.07□□□□□ -0.64
VTI1A-203ENST00000472892 PYDC2Q56P42 97 aa11.07□□□□□ -0.64
VTI1A-203ENST00000472892 OR8G2PQ6IF36 304 aa11.07□□□□□ -0.64
VTI1A-203ENST00000472892 TMED4Q7Z7H5 227 aa11.07□□□□□ -0.64
VTI1A-203ENST00000472892 TOMM5Q8N4H5 51 aa11.07□□□□□ -0.64
VTI1A-203ENST00000472892 DEDD2Q8WXF8 326 aa11.07□□□□□ -0.64
VTI1A-203ENST00000472892 CLEC5AQ9NY25 188 aa11.07□□□□□ -0.64
VTI1A-203ENST00000472892 TBC1D24Q9ULP9 559 aa11.07□□□□□ -0.64
VTI1A-203ENST00000472892 V9GYH0 126 aa11.07□□□□□ -0.64
VTI1A-203ENST00000472892 ELOA3CA0A087WX78 387 aaPredicted RBP11.06□□□□□ -0.64
VTI1A-203ENST00000472892 ZFP92A6NM28 416 aa11.06□□□□□ -0.64
VTI1A-203ENST00000472892 H3BMM0 161 aa11.06□□□□□ -0.64
VTI1A-203ENST00000472892 DEDDO75618 318 aa11.06□□□□□ -0.64
VTI1A-203ENST00000472892 NUP62P37198 522 aaPredicted RBP11.06□□□□□ -0.64
VTI1A-203ENST00000472892 ZNF90Q03938 601 aa11.06□□□□□ -0.64
VTI1A-203ENST00000472892 ZNF79Q15937 498 aa11.06□□□□□ -0.64
VTI1A-203ENST00000472892 SLC35E1Q96K37 410 aa11.06□□□□□ -0.64
VTI1A-203ENST00000472892 SLC25A21Q9BQT8 299 aaPredicted RBP11.06□□□□□ -0.64
VTI1A-203ENST00000472892 PFDN2Q9UHV9 154 aa11.06□□□□□ -0.64
VTI1A-203ENST00000472892 FRAS1Q86XX4 4008 aa11.06□□□□□ -0.64
VTI1A-203ENST00000472892 SNRPGP15A8MWD9 76 aa11.05□□□□□ -0.64
VTI1A-203ENST00000472892 HLA-DMBP28068 263 aa11.05□□□□□ -0.64
VTI1A-203ENST00000472892 NKX2-1P43699 371 aaPredicted RBP11.05□□□□□ -0.64
VTI1A-203ENST00000472892 NUTF2P61970 127 aaKnown RBP11.05□□□□□ -0.64
VTI1A-203ENST00000472892 C1orf194Q5T5A4 169 aa11.05□□□□□ -0.64
VTI1A-203ENST00000472892 PBDC1Q9BVG4 233 aa11.05□□□□□ -0.64
VTI1A-203ENST00000472892 C1QTNF4Q9BXJ3 329 aa11.05□□□□□ -0.64
VTI1A-203ENST00000472892 APLNQ9ULZ1 77 aa11.05□□□□□ -0.64
VTI1A-203ENST00000472892 TMED3Q9Y3Q3 217 aa11.05□□□□□ -0.64
VTI1A-203ENST00000472892 SFT2D2O95562 160 aa11.04□□□□□ -0.64
VTI1A-203ENST00000472892 FABP1P07148 127 aa11.04□□□□□ -0.64
VTI1A-203ENST00000472892 VAMP1P23763 118 aa11.04□□□□□ -0.64
VTI1A-203ENST00000472892 RAB11AP62491 216 aa11.04□□□□□ -0.64
VTI1A-203ENST00000472892 CCDC190Q86UF4 302 aa11.04□□□□□ -0.64
VTI1A-203ENST00000472892 TRGV9Q99603 122 aa11.04□□□□□ -0.64
VTI1A-203ENST00000472892 VPS13DQ5THJ4 4388 aa11.03□□□□□ -0.64
VTI1A-203ENST00000472892 IGLL5B9A064 214 aa11.03□□□□□ -0.64
VTI1A-203ENST00000472892 MED6O75586 246 aa11.03□□□□□ -0.64
VTI1A-203ENST00000472892 IAPPP10997 89 aa11.03□□□□□ -0.64
VTI1A-203ENST00000472892 HLA-DRB4P13762 266 aa11.03□□□□□ -0.64
VTI1A-203ENST00000472892 S100A5P33763 92 aa11.03□□□□□ -0.64
VTI1A-203ENST00000472892 PPP1R1AQ13522 171 aa11.03□□□□□ -0.64
VTI1A-203ENST00000472892 THAP8Q8NA92 274 aa11.03□□□□□ -0.64
VTI1A-203ENST00000472892 WDR12Q9GZL7 423 aaKnown RBP11.03□□□□□ -0.64
VTI1A-203ENST00000472892 XCL2Q9UBD3 114 aa11.03□□□□□ -0.64
VTI1A-203ENST00000472892 HLA-DRB4X5D2U9 266 aa11.03□□□□□ -0.64
VTI1A-203ENST00000472892 IGKV1OR2-108A0A075B7D4 117 aa11.02□□□□□ -0.65
VTI1A-203ENST00000472892 TRAV10A0A0B4J240 114 aa11.02□□□□□ -0.65
VTI1A-203ENST00000472892 PRSS46E5RG02 174 aa11.02□□□□□ -0.65
VTI1A-203ENST00000472892 SOCS3O14543 225 aa11.02□□□□□ -0.65
VTI1A-203ENST00000472892 ID1P41134 155 aa11.02□□□□□ -0.65
VTI1A-203ENST00000472892 RPP30P78346 268 aaKnown RBP11.02□□□□□ -0.65
VTI1A-203ENST00000472892 OR2F1Q13607 317 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms