RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 TOMM40O96008 361 aa11.45□□□□□ -0.58
HIF3A-206ENST00000472815 ICAM4Q14773 271 aa11.45□□□□□ -0.58
HIF3A-206ENST00000472815 SVBPQ8N300 66 aa11.45□□□□□ -0.58
HIF3A-206ENST00000472815 TMEM86BQ8N661 226 aa11.45□□□□□ -0.58
HIF3A-206ENST00000472815 STXBP6Q8NFX7 210 aa11.45□□□□□ -0.58
HIF3A-206ENST00000472815 OR51G1Q8NGK1 321 aa11.45□□□□□ -0.58
HIF3A-206ENST00000472815 OR1B1Q8NGR6 318 aa11.45□□□□□ -0.58
HIF3A-206ENST00000472815 RARRES2Q99969 163 aa11.45□□□□□ -0.58
HIF3A-206ENST00000472815 PRSS22Q9GZN4 317 aa11.45□□□□□ -0.58
HIF3A-206ENST00000472815 NPFFR1Q9GZQ6 430 aa11.45□□□□□ -0.58
HIF3A-206ENST00000472815 ACANP16112 2415 aa11.45□□□□□ -0.58
HIF3A-206ENST00000472815 PSMB11A5LHX3 300 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 NUPL2O15504 423 aaKnown RBP11.44□□□□□ -0.58
HIF3A-206ENST00000472815 PSG1P11464 419 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 ORM2P19652 201 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 BLCAPP62952 87 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 MEF2BQ02080 365 aaPredicted RBP11.44□□□□□ -0.58
HIF3A-206ENST00000472815 TIGITQ495A1 244 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 C19orf54Q5BKX5 351 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 SUN5Q8TC36 379 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 RXFP4Q8TDU9 374 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 Q8WTZ3 238 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 TMEM37Q8WXS4 190 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 YAE1D1Q9NRH1 226 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 DOK5Q9P104 306 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 RNF24Q9Y225 148 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 CARHSP1Q9Y2V2 147 aaKnown RBP11.44□□□□□ -0.58
HIF3A-206ENST00000472815 ARL2-SNX15V9GYD0 113 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 MAST4O15021 2626 aa11.44□□□□□ -0.58
HIF3A-206ENST00000472815 HOXA3O43365 443 aaPredicted RBP11.43□□□□□ -0.58
HIF3A-206ENST00000472815 OR7C2O60412 319 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 IGKV1-17P01599 117 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 GCHFRP30047 84 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 ATP5G2Q06055 141 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 SOHLH1Q5JUK2 328 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 C10orf91Q5T1B1 145 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 MIR17HGQ75NE6 70 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 LINC00305Q7Z4B0 112 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 TMPRSS5Q9H3S3 457 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 HIGD1AQ9Y241 93 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 FOSL1P15407 271 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 LYZP61626 148 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 DEFA5Q01523 94 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 USMG5Q96IX5 58 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 GSX1Q9H4S2 264 aaPredicted RBP11.43□□□□□ -0.58
HIF3A-206ENST00000472815 TMEM160Q9NX00 188 aa11.43□□□□□ -0.58
HIF3A-206ENST00000472815 EIF3GO75821 320 aaKnown RBP eCLIP11.42□□□□□ -0.58
HIF3A-206ENST00000472815 SNAPINO95295 136 aa11.42□□□□□ -0.58
HIF3A-206ENST00000472815 TRGV3P03979 118 aa11.42□□□□□ -0.58
HIF3A-206ENST00000472815 SRP19P09132 144 aaKnown RBP11.42□□□□□ -0.58
HIF3A-206ENST00000472815 CD99P14209 185 aa11.42□□□□□ -0.58
HIF3A-206ENST00000472815 SPATA31B1PQ5VZV4 182 aa11.42□□□□□ -0.58
HIF3A-206ENST00000472815 ZNF502Q8TBZ5 544 aa11.42□□□□□ -0.58
HIF3A-206ENST00000472815 MS4A10Q96PG2 267 aa11.42□□□□□ -0.58
HIF3A-206ENST00000472815 A0A0G2JLM5 398 aa11.41□□□□□ -0.58
HIF3A-206ENST00000472815 OR2T8A6NH00 312 aa11.41□□□□□ -0.58
HIF3A-206ENST00000472815 TMEM250H0YL14 139 aa11.41□□□□□ -0.58
HIF3A-206ENST00000472815 PDE6DO43924 150 aa11.41□□□□□ -0.58
HIF3A-206ENST00000472815 PAGE4O60829 102 aa11.41□□□□□ -0.58
HIF3A-206ENST00000472815 OR2C1O95371 312 aa11.41□□□□□ -0.58
HIF3A-206ENST00000472815 PPIFP30405 207 aaKnown RBP11.41□□□□□ -0.58
HIF3A-206ENST00000472815 FAM209BQ5JX69 171 aa11.41□□□□□ -0.58
HIF3A-206ENST00000472815 SIGLECL1Q8N7X8 197 aa11.41□□□□□ -0.58
HIF3A-206ENST00000472815 OR5AU1Q8NGC0 362 aa11.41□□□□□ -0.58
HIF3A-206ENST00000472815 RNF125Q96EQ8 232 aa11.41□□□□□ -0.58
HIF3A-206ENST00000472815 LINC00527Q9UJ94 153 aa11.41□□□□□ -0.58
HIF3A-206ENST00000472815 TLN2Q9Y4G6 2542 aa11.41□□□□□ -0.58
HIF3A-206ENST00000472815 C9JQL5 133 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 C11orf94C9JXX5 98 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 IL4P05112 153 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 ADCYAP1P18509 176 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 TPPP2P59282 170 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 KRTAP1-1Q07627 177 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 CST9LP1Q5W188 147 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 PATE2Q6UY27 113 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 S4R3C0 116 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 HIVEP1P15822 2718 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 TMEM89A2RUT3 159 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 F6UZH7 168 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 GPR183P32249 361 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 CEBPGP53567 150 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 SLC35B1P78383 322 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 RELQ04864 619 aaPredicted RBP11.4□□□□□ -0.58
HIF3A-206ENST00000472815 ZNF600Q6ZNG1 722 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 IL17RELQ6ZVW7 336 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 CYB561D1Q8N8Q1 229 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 OR4F5Q8NH21 305 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 NOL4LQ96MY1 436 aaPredicted RBP11.4□□□□□ -0.58
HIF3A-206ENST00000472815 UHRF2Q96PU4 802 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 OR4F4Q96R69 305 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 PAXXQ9BUH6 204 aa11.4□□□□□ -0.58
HIF3A-206ENST00000472815 NKX6-2Q9C056 277 aaPredicted RBP11.4□□□□□ -0.58
HIF3A-206ENST00000472815 WI2-2373I1.2A0A1W2PRP0 233 aa11.39□□□□□ -0.59
HIF3A-206ENST00000472815 F8W735 103 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-206ENST00000472815 IGHV3-23P01764 117 aa11.39□□□□□ -0.59
HIF3A-206ENST00000472815 CTSGP08311 255 aa11.39□□□□□ -0.59
HIF3A-206ENST00000472815 PF4V1P10720 104 aa11.39□□□□□ -0.59
HIF3A-206ENST00000472815 UBE2L3P68036 154 aaKnown RBP11.39□□□□□ -0.59
HIF3A-206ENST00000472815 ZNF491Q8N8L2 437 aa11.39□□□□□ -0.59
HIF3A-206ENST00000472815 NIPSNAP3BQ9BS92 247 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms