RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ARL6Q9H0F7 186 aa12.95□□□□□ -0.34
CCM2-205ENST00000472223 PUS1Q9Y606 427 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCM2-205ENST00000472223 LGALS9O00182 355 aa12.94□□□□□ -0.34
CCM2-205ENST00000472223 OVOL1O14753 267 aa12.94□□□□□ -0.34
CCM2-205ENST00000472223 IGKV1-17P01599 117 aa12.94□□□□□ -0.34
CCM2-205ENST00000472223 PSG1P11464 419 aa12.94□□□□□ -0.34
CCM2-205ENST00000472223 ZNF90Q03938 601 aa12.94□□□□□ -0.34
CCM2-205ENST00000472223 CD300CQ08708 224 aa12.94□□□□□ -0.34
CCM2-205ENST00000472223 KLF5Q13887 457 aaPredicted RBP12.94□□□□□ -0.34
CCM2-205ENST00000472223 PARD6GQ9BYG4 376 aaPredicted RBP12.94□□□□□ -0.34
CCM2-205ENST00000472223 WDR61Q9GZS3 305 aaKnown RBP12.94□□□□□ -0.34
CCM2-205ENST00000472223 IL4P05112 153 aa12.93□□□□□ -0.34
CCM2-205ENST00000472223 CD33P20138 364 aa12.93□□□□□ -0.34
CCM2-205ENST00000472223 BMI1P35226 326 aa12.93□□□□□ -0.34
CCM2-205ENST00000472223 TMUB2Q71RG4 321 aa12.93□□□□□ -0.34
CCM2-205ENST00000472223 REC114Q7Z4M0 266 aa12.93□□□□□ -0.34
CCM2-205ENST00000472223 DLX4Q92988 240 aaPredicted RBP12.93□□□□□ -0.34
CCM2-205ENST00000472223 PBDC1Q9BVG4 233 aa12.93□□□□□ -0.34
CCM2-205ENST00000472223 LSM4Q9Y4Z0 139 aaKnown RBP12.93□□□□□ -0.34
CCM2-205ENST00000472223 STAB1Q9NY15 2570 aa12.92□□□□□ -0.34
CCM2-205ENST00000472223 IGKV1D-37A0A075B6S9 117 aa12.92□□□□□ -0.34
CCM2-205ENST00000472223 IGKV1OR2-108A0A075B7D4 117 aa12.92□□□□□ -0.34
CCM2-205ENST00000472223 BCL2L11O43521 198 aa12.92□□□□□ -0.34
CCM2-205ENST00000472223 NPPCP23582 126 aa12.92□□□□□ -0.34
CCM2-205ENST00000472223 ELLP55199 621 aaPredicted RBP12.92□□□□□ -0.34
CCM2-205ENST00000472223 PXDC1Q5TGL8 231 aa12.92□□□□□ -0.34
CCM2-205ENST00000472223 TOMM20LQ6UXN7 152 aa12.92□□□□□ -0.34
CCM2-205ENST00000472223 OR9G4Q8NGQ1 327 aa12.92□□□□□ -0.34
CCM2-205ENST00000472223 METTL26Q96S19 204 aa12.92□□□□□ -0.34
CCM2-205ENST00000472223 MGST2Q99735 147 aa12.92□□□□□ -0.34
CCM2-205ENST00000472223 MCRIP2Q9BUT9 160 aaKnown RBP12.92□□□□□ -0.34
CCM2-205ENST00000472223 NPCDR1Q9BY65 106 aa12.92□□□□□ -0.34
CCM2-205ENST00000472223 K7EMT4 169 aa12.91□□□□□ -0.34
CCM2-205ENST00000472223 TSPAN15O95858 294 aa12.91□□□□□ -0.34
CCM2-205ENST00000472223 LINC00869P0C866 280 aa12.91□□□□□ -0.34
CCM2-205ENST00000472223 CXCL2P19875 107 aa12.91□□□□□ -0.34
CCM2-205ENST00000472223 RPL29P47914 159 aaKnown RBP12.91□□□□□ -0.34
CCM2-205ENST00000472223 LYZP61626 148 aa12.91□□□□□ -0.34
CCM2-205ENST00000472223 TMEM190Q8WZ59 177 aa12.91□□□□□ -0.34
CCM2-205ENST00000472223 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
CCM2-205ENST00000472223 GNPNAT1Q96EK6 184 aaPredicted RBP12.91□□□□□ -0.34
CCM2-205ENST00000472223 RNF125Q96EQ8 232 aa12.91□□□□□ -0.34
CCM2-205ENST00000472223 ZNF471Q9BX82 626 aaPredicted RBP12.91□□□□□ -0.34
CCM2-205ENST00000472223 WFDC1Q9HC57 220 aa12.91□□□□□ -0.34
CCM2-205ENST00000472223 DAZ1Q9NQZ3 744 aaKnown RBP12.91□□□□□ -0.34
CCM2-205ENST00000472223 RABAC1Q9UI14 185 aa12.91□□□□□ -0.34
CCM2-205ENST00000472223 SLC45A2Q9UMX9 530 aa12.91□□□□□ -0.34
CCM2-205ENST00000472223 RNF24Q9Y225 148 aa12.91□□□□□ -0.34
CCM2-205ENST00000472223 WNK1Q9H4A3 2382 aa12.9□□□□□ -0.34
CCM2-205ENST00000472223 A0A1W2PS18 150 aa12.9□□□□□ -0.34
CCM2-205ENST00000472223 HYPMO75409 117 aa12.9□□□□□ -0.34
CCM2-205ENST00000472223 HNRNPCP07910 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCM2-205ENST00000472223 ORM2P19652 201 aa12.9□□□□□ -0.34
CCM2-205ENST00000472223 B2MP61769 119 aa12.9□□□□□ -0.34
CCM2-205ENST00000472223 LGALSLQ3ZCW2 172 aaPredicted RBP12.9□□□□□ -0.34
CCM2-205ENST00000472223 RPL7L1Q6DKI1 246 aaKnown RBP12.9□□□□□ -0.34
CCM2-205ENST00000472223 LINC00482Q8N8I6 264 aa12.9□□□□□ -0.34
CCM2-205ENST00000472223 HSD17B11Q8NBQ5 300 aa12.9□□□□□ -0.34
CCM2-205ENST00000472223 OR1L4Q8NGR5 311 aa12.9□□□□□ -0.34
CCM2-205ENST00000472223 OR1B1Q8NGR6 318 aa12.9□□□□□ -0.34
CCM2-205ENST00000472223 MARC2Q969Z3 335 aa12.9□□□□□ -0.34
CCM2-205ENST00000472223 GRAMD2BQ96HH9 432 aa12.9□□□□□ -0.34
CCM2-205ENST00000472223 GGTLC1Q9BX51 225 aa12.9□□□□□ -0.34
CCM2-205ENST00000472223 TMEM231Q9H6L2 316 aa12.9□□□□□ -0.34
CCM2-205ENST00000472223 ELOA3CA0A087WX78 387 aaPredicted RBP12.89□□□□□ -0.35
CCM2-205ENST00000472223 COX7A2P2O60397 106 aa12.89□□□□□ -0.35
CCM2-205ENST00000472223 OR5G3P0C626 314 aa12.89□□□□□ -0.35
CCM2-205ENST00000472223 GATA2P23769 480 aaPredicted RBP12.89□□□□□ -0.35
CCM2-205ENST00000472223 OPCMLQ14982 345 aa12.89□□□□□ -0.35
CCM2-205ENST00000472223 STPG3Q8N7X2 389 aa12.89□□□□□ -0.35
CCM2-205ENST00000472223 RCC1LQ96I51 464 aaKnown RBP12.89□□□□□ -0.35
CCM2-205ENST00000472223 PFDN5Q99471 154 aa12.89□□□□□ -0.35
CCM2-205ENST00000472223 GPR61Q9BZJ8 451 aa12.89□□□□□ -0.35
CCM2-205ENST00000472223 MRPL27Q9P0M9 148 aaKnown RBP12.89□□□□□ -0.35
CCM2-205ENST00000472223 TIMM9Q9Y5J7 89 aa12.89□□□□□ -0.35
CCM2-205ENST00000472223 PXMP4Q9Y6I8 212 aa12.89□□□□□ -0.35
CCM2-205ENST00000472223 IGHV3OR16-8A0A075B7F1 116 aa12.88□□□□□ -0.35
CCM2-205ENST00000472223 WI2-2373I1.2A0A1W2PRP0 233 aa12.88□□□□□ -0.35
CCM2-205ENST00000472223 A8MWP6 167 aa12.88□□□□□ -0.35
CCM2-205ENST00000472223 MIC13Q5XKP0 118 aa12.88□□□□□ -0.35
CCM2-205ENST00000472223 UNQ9165/PRO28630Q6UXU0 137 aa12.88□□□□□ -0.35
CCM2-205ENST00000472223 DYNLRB2Q8TF09 96 aa12.88□□□□□ -0.35
CCM2-205ENST00000472223 ZFAND3Q9H8U3 227 aa12.88□□□□□ -0.35
CCM2-205ENST00000472223 SLC39A9Q9NUM3 307 aa12.88□□□□□ -0.35
CCM2-205ENST00000472223 SEC14L6B5MCN3 397 aa12.87□□□□□ -0.35
CCM2-205ENST00000472223 ZNF207O43670 478 aaKnown RBP12.87□□□□□ -0.35
CCM2-205ENST00000472223 TPT1P13693 172 aaKnown RBP12.87□□□□□ -0.35
CCM2-205ENST00000472223 TM4SF20Q53R12 229 aa12.87□□□□□ -0.35
CCM2-205ENST00000472223 PRR31Q5SQ13 230 aa12.87□□□□□ -0.35
CCM2-205ENST00000472223 EIF5AL1Q6IS14 154 aaKnown RBP12.87□□□□□ -0.35
CCM2-205ENST00000472223 C9orf62Q8N4C0 152 aa12.87□□□□□ -0.35
CCM2-205ENST00000472223 PSMG3Q9BT73 122 aaPredicted RBP12.87□□□□□ -0.35
CCM2-205ENST00000472223 RSG1Q9BU20 258 aa12.87□□□□□ -0.35
CCM2-205ENST00000472223 DNAJC4Q9NNZ3 241 aa12.87□□□□□ -0.35
CCM2-205ENST00000472223 DOK5Q9P104 306 aa12.87□□□□□ -0.35
CCM2-205ENST00000472223 HIGD1AQ9Y241 93 aa12.87□□□□□ -0.35
CCM2-205ENST00000472223 C2orf70A6NJV1 201 aa12.86□□□□□ -0.35
CCM2-205ENST00000472223 SAP30O75446 220 aa12.86□□□□□ -0.35
CCM2-205ENST00000472223 MBP02144 154 aa12.86□□□□□ -0.35
CCM2-205ENST00000472223 FOLR2P14207 255 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms