RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SLC25A48Q6ZT89 311 aaKnown RBP7.03□□□□□ -1.28
CD47-204ENST00000471694 ZNF876PQ49A33 203 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 C18orf12Q96KH6 178 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 NAPSAO96009 420 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 CBLN1P23435 193 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 SSBP2P81877 361 aaPredicted RBP7.03□□□□□ -1.28
CD47-204ENST00000471694 RNF5Q99942 180 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 RPP21Q9H633 154 aaKnown RBP7.03□□□□□ -1.28
CD47-204ENST00000471694 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.03□□□□□ -1.28
CD47-204ENST00000471694 PAX4O43316 350 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 AZU1P20160 251 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 MEF2BQ02080 365 aaPredicted RBP7.03□□□□□ -1.28
CD47-204ENST00000471694 PRO1933Q9H354 126 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 PKIGQ9Y2B9 76 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 APOHP02749 345 aaPredicted RBP7.03□□□□□ -1.28
CD47-204ENST00000471694 TMEM249Q2WGJ8 235 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 AICDAQ9GZX7 198 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 GAGE12JA6NER3 117 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 SRRM5B3KS81 715 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 GAGE1Q13065 139 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 GAGE4Q13068 117 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 GAGE5Q13069 117 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 GAGE13Q4V321 117 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 ISOC2Q96AB3 205 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 C1orf159Q96HA4 380 aa7.03□□□□□ -1.28
CD47-204ENST00000471694 MRPL16Q9NX20 251 aaKnown RBP7.03□□□□□ -1.28
CD47-204ENST00000471694 MGAMO43451 1857 aa7.02□□□□□ -1.28
CD47-204ENST00000471694 TEX48A0A1B0GUV7 120 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 A0A1B0GV72 72 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 ATP6V0E1O15342 81 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 GP9P14770 177 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 PET117Q6UWS5 81 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 CD177Q8N6Q3 437 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 VPREB3Q9UKI3 123 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 TRBV5-3A0A0A0MS03 114 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 A0A1B0GUT8 65 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 TMEM136Q6ZRR5 245 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 GATD1Q8NB37 220 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 RNF183Q96D59 192 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 PAM16Q9Y3D7 125 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 IGHV3-16A0A0C4DH30 117 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 A0A0J9YY99 117 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 MDKP21741 143 aaPredicted RBP7.02□□□□□ -1.29
CD47-204ENST00000471694 ZNF414Q96IQ9 312 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 HEATR5BQ9P2D3 2071 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 KIAA1644Q3SXP7 199 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 C9orf139Q6ZV77 190 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 SPOCK3Q9BQ16 436 aa7.02□□□□□ -1.29
CD47-204ENST00000471694 RAMP3O60896 148 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 NPC2P61916 151 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 TRAF4Q9BUZ4 470 aaPredicted RBP7.01□□□□□ -1.29
CD47-204ENST00000471694 TM2D1Q9BX74 207 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 C10orf55Q5SWW7 151 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 EDA2RQ9HAV5 297 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 ANAPC10Q9UM13 185 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 CYSLTR1Q9Y271 337 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 AGAP20933 346 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 FAM90A2PQ658T7 463 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 SLIRPQ9GZT3 109 aaKnown RBP7.01□□□□□ -1.29
CD47-204ENST00000471694 MRPS18AQ9NVS2 196 aaKnown RBP7.01□□□□□ -1.29
CD47-204ENST00000471694 PSG8Q9UQ74 426 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 TMEM14DPA8MWL7 114 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 GZMMP51124 257 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 PIFOQ8TCI5 191 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 IGHV4-59P01825 116 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 HBDP02042 147 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 FLVCR1-AS1Q8TAF5 88 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 LINC00477Q96M19 166 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 RARRES2Q99969 163 aa7.01□□□□□ -1.29
CD47-204ENST00000471694 FAM131CQ96AQ9 280 aa7□□□□□ -1.29
CD47-204ENST00000471694 TRAV13-1A0A0B4J241 112 aa7□□□□□ -1.29
CD47-204ENST00000471694 SRSF1Q07955 248 aaKnown RBP eCLIP7□□□□□ -1.29
CD47-204ENST00000471694 LYZL4Q96KX0 146 aa7□□□□□ -1.29
CD47-204ENST00000471694 C5orf66Q9H5L9 145 aa7□□□□□ -1.29
CD47-204ENST00000471694 MAP1BP46821 2468 aaKnown RBP7□□□□□ -1.29
CD47-204ENST00000471694 ZNF318Q5VUA4 2279 aa7□□□□□ -1.29
CD47-204ENST00000471694 IGHV4-30-2A0A087WSY4 118 aa7□□□□□ -1.29
CD47-204ENST00000471694 KNCNA6PVL3 124 aa7□□□□□ -1.29
CD47-204ENST00000471694 MORN3Q6PF18 240 aaPredicted RBP7□□□□□ -1.29
CD47-204ENST00000471694 LAMTOR3Q9UHA4 124 aa7□□□□□ -1.29
CD47-204ENST00000471694 ZNF250P15622 560 aa7□□□□□ -1.29
CD47-204ENST00000471694 LINC01590Q5TEZ4 76 aa7□□□□□ -1.29
CD47-204ENST00000471694 Q6AWC8 147 aa7□□□□□ -1.29
CD47-204ENST00000471694 INTS1Q8N201 2190 aaKnown RBP7□□□□□ -1.29
CD47-204ENST00000471694 RALGAPA2Q2PPJ7 1873 aa7□□□□□ -1.29
CD47-204ENST00000471694 H0YJW9 148 aa7□□□□□ -1.29
CD47-204ENST00000471694 TOMM40O96008 361 aa7□□□□□ -1.29
CD47-204ENST00000471694 TRBV25-1A0A075B6N4 114 aa7□□□□□ -1.29
CD47-204ENST00000471694 SCO2A0A1W2PP80 73 aa7□□□□□ -1.29
CD47-204ENST00000471694 NPIPB5A8MRT5 1133 aa7□□□□□ -1.29
CD47-204ENST00000471694 GGTLC3B5MD39 225 aa7□□□□□ -1.29
CD47-204ENST00000471694 TNFRSF6BO95407 300 aa7□□□□□ -1.29
CD47-204ENST00000471694 FOLR2P14207 255 aa7□□□□□ -1.29
CD47-204ENST00000471694 SPINK13Q1W4C9 94 aa7□□□□□ -1.29
CD47-204ENST00000471694 C4orf48Q5BLP8 95 aa7□□□□□ -1.29
CD47-204ENST00000471694 HSPB9Q9BQS6 159 aa7□□□□□ -1.29
CD47-204ENST00000471694 SNRNP200O75643 2136 aaKnown RBP6.99□□□□□ -1.29
CD47-204ENST00000471694 LINC00587B1AMM8 73 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 PYYP10082 97 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 GAS1P54826 345 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms