RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 PRM2P04554 102 aa13.25□□□□□ -0.29
NCKIPSD-209ENST00000470006 ZNF79Q15937 498 aa13.25□□□□□ -0.29
NCKIPSD-209ENST00000470006 NRG4Q8WWG1 115 aa13.25□□□□□ -0.29
NCKIPSD-209ENST00000470006 NPIPB3Q92617 1050 aa13.25□□□□□ -0.29
NCKIPSD-209ENST00000470006 FRZBQ92765 325 aa13.25□□□□□ -0.29
NCKIPSD-209ENST00000470006 ATP5G1P05496 136 aa13.24□□□□□ -0.29
NCKIPSD-209ENST00000470006 NUP62P37198 522 aaPredicted RBP13.24□□□□□ -0.29
NCKIPSD-209ENST00000470006 ATP5G3P48201 142 aa13.24□□□□□ -0.29
NCKIPSD-209ENST00000470006 UCP3P55916 312 aa13.24□□□□□ -0.29
NCKIPSD-209ENST00000470006 FCN2Q15485 313 aa13.24□□□□□ -0.29
NCKIPSD-209ENST00000470006 UBE2NLQ5JXB2 153 aa13.24□□□□□ -0.29
NCKIPSD-209ENST00000470006 Q5VSD8 79 aa13.24□□□□□ -0.29
NCKIPSD-209ENST00000470006 ETFRF1Q6IPR1 90 aa13.24□□□□□ -0.29
NCKIPSD-209ENST00000470006 OR4C16Q8NGL9 310 aa13.24□□□□□ -0.29
NCKIPSD-209ENST00000470006 P0C879 139 aa13.23□□□□□ -0.29
NCKIPSD-209ENST00000470006 PSG1P11464 419 aa13.23□□□□□ -0.29
NCKIPSD-209ENST00000470006 PI3P19957 117 aa13.23□□□□□ -0.29
NCKIPSD-209ENST00000470006 SPCS3P61009 180 aa13.23□□□□□ -0.29
NCKIPSD-209ENST00000470006 BSXQ3C1V8 233 aa13.23□□□□□ -0.29
NCKIPSD-209ENST00000470006 RNASEH2CQ8TDP1 164 aaKnown RBP13.23□□□□□ -0.29
NCKIPSD-209ENST00000470006 RNF141Q8WVD5 230 aa13.23□□□□□ -0.29
NCKIPSD-209ENST00000470006 IGF2BP2-AS1Q96M15 143 aa13.23□□□□□ -0.29
NCKIPSD-209ENST00000470006 TP53RKQ96S44 253 aa13.23□□□□□ -0.29
NCKIPSD-209ENST00000470006 ABHD1Q96SE0 405 aa13.23□□□□□ -0.29
NCKIPSD-209ENST00000470006 A0A0J9YX75 114 aa13.22□□□□□ -0.29
NCKIPSD-209ENST00000470006 BTF3P20290 206 aaKnown RBP13.22□□□□□ -0.29
NCKIPSD-209ENST00000470006 PIGPP57054 158 aa13.22□□□□□ -0.29
NCKIPSD-209ENST00000470006 LYPD1Q8N2G4 141 aa13.22□□□□□ -0.29
NCKIPSD-209ENST00000470006 SAMD12Q8N8I0 201 aa13.22□□□□□ -0.29
NCKIPSD-209ENST00000470006 RNF125Q96EQ8 232 aa13.22□□□□□ -0.29
NCKIPSD-209ENST00000470006 KRTAP1-5Q9BYS1 174 aa13.22□□□□□ -0.29
NCKIPSD-209ENST00000470006 RPRMQ9NS64 109 aa13.22□□□□□ -0.29
NCKIPSD-209ENST00000470006 FLG2Q5D862 2391 aaPredicted RBP13.21□□□□□ -0.29
NCKIPSD-209ENST00000470006 C3orf85A0A1B0GTC6 90 aa13.21□□□□□ -0.29
NCKIPSD-209ENST00000470006 RCVRNP35243 200 aa13.21□□□□□ -0.29
NCKIPSD-209ENST00000470006 PAX9P55771 341 aa13.21□□□□□ -0.29
NCKIPSD-209ENST00000470006 SP6Q3SY56 376 aa13.21□□□□□ -0.29
NCKIPSD-209ENST00000470006 SPARTQ8N0X7 666 aa13.21□□□□□ -0.29
NCKIPSD-209ENST00000470006 FCGR1BQ92637 280 aa13.21□□□□□ -0.29
NCKIPSD-209ENST00000470006 PPP1R14BQ96C90 147 aa13.21□□□□□ -0.29
NCKIPSD-209ENST00000470006 GPR146Q96CH1 333 aa13.21□□□□□ -0.29
NCKIPSD-209ENST00000470006 UHRF2Q96PU4 802 aa13.21□□□□□ -0.29
NCKIPSD-209ENST00000470006 A0A0G2JRQ6 117 aa13.2□□□□□ -0.3
NCKIPSD-209ENST00000470006 CEBPZOSA8MTT3 80 aa13.2□□□□□ -0.3
NCKIPSD-209ENST00000470006 INSP01308 110 aa13.2□□□□□ -0.3
NCKIPSD-209ENST00000470006 GABARAPL2P60520 117 aa13.2□□□□□ -0.3
NCKIPSD-209ENST00000470006 C2orf83Q53S99 150 aa13.2□□□□□ -0.3
NCKIPSD-209ENST00000470006 SLC24A4Q8NFF2 622 aa13.2□□□□□ -0.3
NCKIPSD-209ENST00000470006 C16orf92Q96LL3 132 aa13.2□□□□□ -0.3
NCKIPSD-209ENST00000470006 Q9H3A6 140 aa13.2□□□□□ -0.3
NCKIPSD-209ENST00000470006 DOK5Q9P104 306 aa13.2□□□□□ -0.3
NCKIPSD-209ENST00000470006 CBY3A6NI87 242 aa13.19□□□□□ -0.3
NCKIPSD-209ENST00000470006 ISLRO14498 428 aa13.19□□□□□ -0.3
NCKIPSD-209ENST00000470006 NXPH3O95157 252 aa13.19□□□□□ -0.3
NCKIPSD-209ENST00000470006 FUSP35637 526 aaKnown RBP eCLIP13.19□□□□□ -0.3
NCKIPSD-209ENST00000470006 RND3P61587 244 aa13.19□□□□□ -0.3
NCKIPSD-209ENST00000470006 ZNF486Q96H40 463 aaPredicted RBP13.19□□□□□ -0.3
NCKIPSD-209ENST00000470006 C18orf15Q96N68 181 aa13.19□□□□□ -0.3
NCKIPSD-209ENST00000470006 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.19□□□□□ -0.3
NCKIPSD-209ENST00000470006 MYCBP2O75592 4640 aa13.19□□□□□ -0.3
NCKIPSD-209ENST00000470006 SOCS3O14543 225 aa13.18□□□□□ -0.3
NCKIPSD-209ENST00000470006 EREGO14944 169 aa13.18□□□□□ -0.3
NCKIPSD-209ENST00000470006 TMEM127O75204 238 aa13.18□□□□□ -0.3
NCKIPSD-209ENST00000470006 SUPT4H1P63272 117 aaKnown RBP13.18□□□□□ -0.3
NCKIPSD-209ENST00000470006 OR5I1Q13606 314 aa13.18□□□□□ -0.3
NCKIPSD-209ENST00000470006 SPINK13Q1W4C9 94 aa13.18□□□□□ -0.3
NCKIPSD-209ENST00000470006 OR8G2PQ6IF36 304 aa13.18□□□□□ -0.3
NCKIPSD-209ENST00000470006 OR8I2Q8N0Y5 310 aa13.18□□□□□ -0.3
NCKIPSD-209ENST00000470006 PGPEP1Q9NXJ5 209 aa13.18□□□□□ -0.3
NCKIPSD-209ENST00000470006 ZNF586Q9NXT0 402 aa13.18□□□□□ -0.3
NCKIPSD-209ENST00000470006 COPZ2Q9P299 210 aa13.18□□□□□ -0.3
NCKIPSD-209ENST00000470006 M0R2Z0 102 aa13.17□□□□□ -0.3
NCKIPSD-209ENST00000470006 HTN1P15515 57 aa13.17□□□□□ -0.3
NCKIPSD-209ENST00000470006 LYZP61626 148 aa13.17□□□□□ -0.3
NCKIPSD-209ENST00000470006 B2MP61769 119 aa13.17□□□□□ -0.3
NCKIPSD-209ENST00000470006 IZUMO2Q6UXV1 221 aa13.17□□□□□ -0.3
NCKIPSD-209ENST00000470006 SNX29P2Q8IUI4 249 aa13.17□□□□□ -0.3
NCKIPSD-209ENST00000470006 CROCCP3Q8IVE0 287 aa13.17□□□□□ -0.3
NCKIPSD-209ENST00000470006 GPX8Q8TED1 209 aa13.17□□□□□ -0.3
NCKIPSD-209ENST00000470006 GNPNAT1Q96EK6 184 aaPredicted RBP13.17□□□□□ -0.3
NCKIPSD-209ENST00000470006 C20orf173Q96LM9 149 aa13.17□□□□□ -0.3
NCKIPSD-209ENST00000470006 VCX3BQ9H321 246 aa13.17□□□□□ -0.3
NCKIPSD-209ENST00000470006 SMIM31A0A1B0GVY4 71 aa13.16□□□□□ -0.3
NCKIPSD-209ENST00000470006 A0A1W2PPQ1 181 aa13.16□□□□□ -0.3
NCKIPSD-209ENST00000470006 ZFP92A6NM28 416 aa13.16□□□□□ -0.3
NCKIPSD-209ENST00000470006 J3QL48 77 aa13.16□□□□□ -0.3
NCKIPSD-209ENST00000470006 AZU1P20160 251 aa13.16□□□□□ -0.3
NCKIPSD-209ENST00000470006 XGP55808 180 aa13.16□□□□□ -0.3
NCKIPSD-209ENST00000470006 KLF9Q13886 244 aaPredicted RBP13.16□□□□□ -0.3
NCKIPSD-209ENST00000470006 C1orf194Q5T5A4 169 aa13.16□□□□□ -0.3
NCKIPSD-209ENST00000470006 NOXA1Q86UR1 476 aa13.16□□□□□ -0.3
NCKIPSD-209ENST00000470006 OR52E5Q8NH55 327 aa13.16□□□□□ -0.3
NCKIPSD-209ENST00000470006 FAT1Q14517 4588 aa13.16□□□□□ -0.3
NCKIPSD-209ENST00000470006 TSPOP30536 169 aa13.15□□□□□ -0.3
NCKIPSD-209ENST00000470006 SAMD13Q5VXD3 122 aa13.15□□□□□ -0.3
NCKIPSD-209ENST00000470006 AMTNQ6UX39 209 aa13.15□□□□□ -0.3
NCKIPSD-209ENST00000470006 CCDC71LQ8N9Z2 235 aa13.15□□□□□ -0.3
NCKIPSD-209ENST00000470006 LINC01587Q99440 93 aa13.15□□□□□ -0.3
NCKIPSD-209ENST00000470006 MDFICQ9P1T7 246 aa13.15□□□□□ -0.3
NCKIPSD-209ENST00000470006 ANKRD65E5RJM6 399 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms