RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 NIPSNAP1Q9BPW8 284 aa2.42□□□□□ -2.02
GPNMB-207ENST00000468723 THTPAQ9BU02 230 aa2.42□□□□□ -2.02
GPNMB-207ENST00000468723 PARD6GQ9BYG4 376 aaPredicted RBP2.42□□□□□ -2.02
GPNMB-207ENST00000468723 OR51E2Q9H255 320 aa2.42□□□□□ -2.02
GPNMB-207ENST00000468723 USE1Q9NZ43 259 aa2.42□□□□□ -2.02
GPNMB-207ENST00000468723 OPN4Q9UHM6 478 aa2.42□□□□□ -2.02
GPNMB-207ENST00000468723 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.42□□□□□ -2.02
GPNMB-207ENST00000468723 MAP1AP78559 2803 aaPredicted RBP2.41□□□□□ -2.02
GPNMB-207ENST00000468723 DAPL1A0PJW8 107 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 OR6C6A6NF89 314 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 ZNF850A8MQ14 1090 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 C8orf87E5RJ46 101 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 F5H768 121 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 M0R135 149 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 CCRL2O00421 344 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 PHYHO14832 338 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 MED6O75586 246 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 CA2P00918 260 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 CD74P04233 296 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 SCGB1C2P0DMR2 95 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 SPI1P17947 270 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 HSD11B1P28845 292 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 TGFBR1P36897 503 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 CBX5P45973 191 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 GABRA2P47869 451 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 SRP9P49458 86 aaKnown RBP2.41□□□□□ -2.02
GPNMB-207ENST00000468723 UBA52P62987 128 aaKnown RBP2.41□□□□□ -2.02
GPNMB-207ENST00000468723 TSPAN31Q12999 210 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 LY6EQ16553 131 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 MOGQ16653 247 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 DEFB112Q30KQ8 113 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 LINC00483Q53H64 154 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 FAM162BQ5T6X4 162 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 NXNL2Q5VZ03 156 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 MORN3Q6PF18 240 aaPredicted RBP2.41□□□□□ -2.02
GPNMB-207ENST00000468723 DNM1P34Q6PK57 102 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 LRRN1Q6UXK5 716 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 ARPINQ7Z6K5 226 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 LRRC28Q86X40 367 aaPredicted RBP2.41□□□□□ -2.02
GPNMB-207ENST00000468723 DHFR2Q86XF0 187 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 SAXO1Q8IYX7 474 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 FAM216BQ8N7L0 139 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 ZNF555Q8NEP9 628 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 OR52L1Q8NGH7 329 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 OR11L1Q8NGX0 322 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 OR8S1Q8NH09 359 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 SCGB1C1Q8TD33 95 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 H1FXQ92522 213 aaKnown RBP2.41□□□□□ -2.02
GPNMB-207ENST00000468723 APOBEC3DQ96AK3 386 aaPredicted RBP2.41□□□□□ -2.02
GPNMB-207ENST00000468723 REEP6Q96HR9 211 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 YPEL4Q96NS1 127 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 RNF5Q99942 180 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 ADAT1Q9BUB4 502 aaKnown RBP2.41□□□□□ -2.02
GPNMB-207ENST00000468723 METTL9Q9H1A3 318 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 TVP23BQ9NYZ1 205 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 OR5V1Q9UGF6 321 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 ZNF391Q9UJN7 358 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 ARL2BPQ9Y2Y0 163 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 CBY1Q9Y3M2 126 aa2.41□□□□□ -2.02
GPNMB-207ENST00000468723 SAMHD1Q9Y3Z3 626 aaKnown RBP2.41□□□□□ -2.02
GPNMB-207ENST00000468723 MTORP42345 2549 aa2.4□□□□□ -2.02
GPNMB-207ENST00000468723 JMJD1CQ15652 2540 aa2.4□□□□□ -2.02
GPNMB-207ENST00000468723 ANK2Q01484 3957 aa2.4□□□□□ -2.02
GPNMB-207ENST00000468723 IGHV1-3A0A0C4DH29 117 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 TINCRA0A1B0GVN0 87 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 DHRS12A0PJE2 317 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 CD300LBA8K4G0 201 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 IQCF6A8MYZ5 107 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 C9JQL5 133 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 LGALS9O00182 355 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 BHLHE40O14503 412 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 DCTN3O75935 186 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 RPP14O95059 124 aaKnown RBP2.4□□□□□ -2.03
GPNMB-207ENST00000468723 PIPP12273 146 aaPredicted RBP2.4□□□□□ -2.03
GPNMB-207ENST00000468723 CRABP1P29762 137 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 SMIM11AP58511 58 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 LSM6P62312 80 aaKnown RBP2.4□□□□□ -2.03
GPNMB-207ENST00000468723 HIST1H3AP68431 136 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 FAM3AP98173 230 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 PRDX4Q13162 271 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 APOFQ13790 326 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 SLC9A3R2Q15599 337 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 C4orf26Q17RF5 130 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 TMEM241Q24JQ0 296 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 HLA-DRB5Q30154 266 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 HIST2H3PS2Q5TEC6 136 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 PP632Q6XCG6 107 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 HIST2H3AQ71DI3 136 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 VMO1Q7Z5L0 202 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 DPPA2Q7Z7J5 298 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 ZNF695Q8IW36 515 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 OR8B3Q8NGG8 313 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 OR4P4Q8NGL7 312 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 OR2K2Q8NGT1 345 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 OR5H2Q8NGV7 314 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 TEX47Q8TBZ9 253 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 CASTOR1Q8WTX7 329 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 CANT1Q8WVQ1 401 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 C17orf50Q8WW18 174 aa2.4□□□□□ -2.03
GPNMB-207ENST00000468723 SPTSSAQ969W0 71 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms