RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 DLK1P80370 383 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 ATP6V1FQ16864 119 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 DEFB136Q30KP8 78 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 SPINK9Q5DT21 86 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 SPANXN5Q5MJ07 72 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 LCN12Q6JVE5 192 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 ZNF600Q6ZNG1 722 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 SLC16A13Q7RTY0 426 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 THAP6Q8TBB0 222 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 GATAD1Q8WUU5 269 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 GRAMD2BQ96HH9 432 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 OR5B12Q96R08 314 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 ZNF436Q9C0F3 470 aaPredicted RBP5.3□□□□□ -1.56
CLDN4-204ENST00000466411 KCNIP2Q9NS61 270 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 LYRM2Q9NU23 88 aaPredicted RBP5.3□□□□□ -1.56
CLDN4-204ENST00000466411 ALG5Q9Y673 324 aa5.3□□□□□ -1.56
CLDN4-204ENST00000466411 K7EPK0 472 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 CCSO14618 274 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 SAP30O75446 220 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 NXPH3O95157 252 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 CTSGP08311 255 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 IAPPP10997 89 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 OR10J1P30954 320 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 P2RY1P47900 373 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 SULT1A1P50225 295 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 CAV2P51636 162 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 MFAP2P55001 183 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 AKR1C1Q04828 323 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 PXDC1Q5TGL8 231 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 SAMD13Q5VXD3 122 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 LAMTOR1Q6IAA8 161 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 PRSS54Q6PEW0 395 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 TMEM14EPQ6UXP3 125 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 Q8N3U1 123 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 Q8WTZ3 238 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 PPP1R1CQ8WVI7 109 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 TMEM190Q8WZ59 177 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 MAGT1Q9H0U3 335 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 NPVFQ9HCQ7 196 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 MRPL27Q9P0M9 148 aaKnown RBP5.29□□□□□ -1.56
CLDN4-204ENST00000466411 PAIP2BQ9ULR5 123 aaKnown RBP5.29□□□□□ -1.56
CLDN4-204ENST00000466411 SLC45A2Q9UMX9 530 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 RCL1Q9Y2P8 373 aaKnown RBP5.29□□□□□ -1.56
CLDN4-204ENST00000466411 LSM5Q9Y4Y9 91 aaKnown RBP5.29□□□□□ -1.56
CLDN4-204ENST00000466411 DMRT1Q9Y5R6 373 aa5.29□□□□□ -1.56
CLDN4-204ENST00000466411 TRAV25A0A0B4J276 109 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 ZNF320A2RRD8 509 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 ZFP92A6NM28 416 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 MPTX1A8MV57 137 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 DFFBO76075 338 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 MPC2O95563 127 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 TMEM50AO95807 157 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 RND2P52198 227 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 H2BFSP57053 126 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 SYNJ2BPP57105 145 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 IL15RAQ13261 267 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 RAB32Q13637 225 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 ZFAND6Q6FIF0 208 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 OR8G2PQ6IF36 304 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 TEPPQ6URK8 271 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 TMEM144Q7Z5S9 345 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 ZNF546Q86UE3 836 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 BPIFCQ8NFQ6 507 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 OR51G1Q8NGK1 321 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 DYNLRB2Q8TF09 96 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 DLX4Q92988 240 aaPredicted RBP5.28□□□□□ -1.56
CLDN4-204ENST00000466411 ACY3Q96HD9 319 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 METTL26Q96S19 204 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 TRGV9Q99603 122 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 FBXL17Q9UF56 701 aa5.28□□□□□ -1.56
CLDN4-204ENST00000466411 LSM4Q9Y4Z0 139 aaKnown RBP5.28□□□□□ -1.56
CLDN4-204ENST00000466411 TRAV14DV4A0A0A6YYC5 116 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 PPP5D1E7EU14 171 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 YIF1AO95070 293 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 OR2C1O95371 312 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 TOMM40O96008 361 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 IGLC1P0CG04 106 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 RD3LP0DJH9 198 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 SPNP16150 400 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 NPPCP23582 126 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 AP2S1P53680 142 aaPredicted RBP5.27□□□□□ -1.57
CLDN4-204ENST00000466411 SLURP1P55000 103 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 CMC4P56277 68 aaPredicted RBP5.27□□□□□ -1.57
CLDN4-204ENST00000466411 PAFAH1B2P68402 229 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 SLC38A11Q08AI6 406 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 GAMTQ14353 236 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 C19orf35Q6ZS72 473 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 C18orf65Q6ZTR6 163 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 ACOT7LQ6ZUV0 252 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 GTSCR1Q86UQ5 136 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 THAP8Q8NA92 274 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 INO80EQ8NBZ0 244 aaPredicted RBP5.27□□□□□ -1.57
CLDN4-204ENST00000466411 GPR82Q96P67 336 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 FNDC4Q9H6D8 234 aaPredicted RBP5.27□□□□□ -1.57
CLDN4-204ENST00000466411 UQCC1Q9NVA1 299 aa5.27□□□□□ -1.57
CLDN4-204ENST00000466411 SMCO3A2RU48 225 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 HELTA6NFD8 242 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 C2orf70A6NJV1 201 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 PRSS46E5RG02 174 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 C17orf112F2Z3M2 114 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms