RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 BASP1P80723 227 aaKnown RBP0.71□□□□□ -2.3
TM9SF3-203ENST00000464654 KRR1Q13601 381 aaKnown RBP0.71□□□□□ -2.3
TM9SF3-203ENST00000464654 PHF13Q86YI8 300 aaPredicted RBP0.71□□□□□ -2.3
TM9SF3-203ENST00000464654 LINC00311Q8N616 119 aa0.71□□□□□ -2.3
TM9SF3-203ENST00000464654 PRRT1Q99946 306 aa0.71□□□□□ -2.3
TM9SF3-203ENST00000464654 SH3BGRL3Q9H299 93 aa0.71□□□□□ -2.3
TM9SF3-203ENST00000464654 STOML2Q9UJZ1 356 aa0.71□□□□□ -2.3
TM9SF3-203ENST00000464654 ZNF469Q96JG9 3925 aaPredicted RBP0.71□□□□□ -2.3
TM9SF3-203ENST00000464654 ADGRB2O60241 1585 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 UBR2Q8IWV8 1755 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 EML6Q6ZMW3 1958 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 TRAV12-1A0A0B4J245 112 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 TRAV1-1A0A0B4J248 108 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 IGKV3D-7A0A0C4DH55 119 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 IGKV3OR2-268A0A0C4DH90 116 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 CLDN25C9JDP6 229 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 TMEM238C9JI98 176 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 M0R378 163 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 OR1I1O60431 355 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 IFNA7P01567 189 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 SSR2P43308 183 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 DEFA3P59666 94 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 RHOGP84095 191 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 LYRM7Q5U5X0 104 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 C22orf39Q6P5X5 142 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 C12orf29Q8N999 325 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 OR4C6Q8NH72 309 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 STAG3L4Q8TBR4 150 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 AP3S1Q92572 193 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 TEX37Q96LM6 180 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 PHB2Q99623 299 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 CCDC94Q9BW85 323 aaPredicted RBP0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 OR5AC2Q9NZP5 309 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 PRNDQ9UKY0 176 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 TNRC6BQ9UPQ9 1833 aaKnown RBP0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 NOTCH1P46531 2555 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 MIA2Q96PC5 1412 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 DOCK4Q8N1I0 1966 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 SCN8AQ9UQD0 1980 aa0.7□□□□□ -2.3
TM9SF3-203ENST00000464654 LOC110117498A0A087WWA1 95 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 HMGB3O15347 200 aaKnown RBP0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 SULT1B1O43704 296 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 UBL3O95164 117 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 S100A5P33763 92 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 KRTAP10-4P60372 401 aaPredicted RBP0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 NCALDP61601 193 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 DYNLT1P63172 113 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 RPL19P84098 196 aaKnown RBP0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 POU6F1Q14863 301 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 CDK5R1Q15078 307 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 ESRGQ1W209 222 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 BRMS1LQ5PSV4 323 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 TMED4Q7Z7H5 227 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 EXOC3-AS1Q8N2X6 119 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 LINC00471Q8N535 108 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 CANT1Q8WVQ1 401 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 CEP19Q96LK0 163 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 YPEL2Q96QA6 119 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 SERPINI1Q99574 410 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 GINS3Q9BRX5 216 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 PRADC1Q9BSG0 188 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 REG4Q9BYZ8 158 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 TRABDQ9H4I3 376 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 LYRM2Q9NU23 88 aaPredicted RBP0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 SLC35A3Q9Y2D2 325 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 MYH2Q9UKX2 1941 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 ROS1P08922 2347 aa0.69□□□□□ -2.3
TM9SF3-203ENST00000464654 MYH10P35580 1976 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 TRGV10A0A0A0MS01 117 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 TRAV14DV4A0A0A6YYC5 116 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 C1orf196B1AJZ1 125 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 TAX1BP3O14907 124 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 GGCTO75223 188 aaKnown RBP0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 ATG12O94817 140 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 IFNA1P01562 189 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 LYNX1P0DP58 116 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 EIF5AP63241 154 aaKnown RBP0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 DEFB113Q30KQ7 82 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 C1orf137Q5JT78 98 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 Q8IYB0 196 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 OR2T10Q8NGZ9 312 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 C10orf105Q8TEF2 133 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 SFT2D1Q8WV19 159 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 LINC00467Q9BRT7 94 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 PBOV1Q9GZY1 135 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 BOLA2Q9H3K6 86 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 BCL2L10Q9HD36 194 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 SCN3AQ9NY46 2000 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 UTP11Q9Y3A2 253 aaKnown RBP0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 CHCHD2Q9Y6H1 151 aaPredicted RBP0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 TNRC6AQ8NDV7 1962 aaKnown RBP0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 TAF1LQ8IZX4 1826 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 ROCK1Q13464 1354 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 DLG5Q8TDM6 1919 aa0.68□□□□□ -2.3
TM9SF3-203ENST00000464654 TRPM1Q7Z4N2 1603 aa0.67□□□□□ -2.3
TM9SF3-203ENST00000464654 IGKV3-7A0A075B6H7 116 aa0.67□□□□□ -2.3
TM9SF3-203ENST00000464654 IGKV2-40A0A087WW87 121 aaPredicted RBP0.67□□□□□ -2.3
TM9SF3-203ENST00000464654 TRAV3A0A0B4J244 114 aa0.67□□□□□ -2.3
TM9SF3-203ENST00000464654 E5RI56 91 aa0.67□□□□□ -2.3
TM9SF3-203ENST00000464654 M0R2N4 97 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms