RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CBY3A6NI87 242 aa5.87□□□□□ -1.47
USP48-206ENST00000464577 M0R296 226 aa5.87□□□□□ -1.47
USP48-206ENST00000464577 APOHP02749 345 aaPredicted RBP5.87□□□□□ -1.47
USP48-206ENST00000464577 TCRAP04437 139 aa5.87□□□□□ -1.47
USP48-206ENST00000464577 CRYGCP07315 174 aa5.87□□□□□ -1.47
USP48-206ENST00000464577 WT1-ASQ06250 92 aa5.87□□□□□ -1.47
USP48-206ENST00000464577 C3orf36Q3SXR2 165 aa5.87□□□□□ -1.47
USP48-206ENST00000464577 PVRIGQ6DKI7 326 aa5.87□□□□□ -1.47
USP48-206ENST00000464577 ZNF788Q6ZQV5 615 aa5.87□□□□□ -1.47
USP48-206ENST00000464577 OR10X1Q8NGY0 326 aa5.87□□□□□ -1.47
USP48-206ENST00000464577 DAZAP1Q96EP5 407 aaKnown RBP5.87□□□□□ -1.47
USP48-206ENST00000464577 TRGV9Q99603 122 aa5.87□□□□□ -1.47
USP48-206ENST00000464577 ZNF71Q9NQZ8 489 aaPredicted RBP5.87□□□□□ -1.47
USP48-206ENST00000464577 IGLV3-9A0A075B6K5 115 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.86□□□□□ -1.47
USP48-206ENST00000464577 A0A1B0GW15 77 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 hADV38S2A0JD32 116 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 CGB1A6NKQ9 187 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 LAMTOR5O43504 91 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 NBEAP1P0C6P0 100 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 IGLC1P0CG04 106 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 GP9P14770 177 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 GLRXP35754 106 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 ARF6P62330 175 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 DUX4L9Q6RFH8 374 aaPredicted RBP5.86□□□□□ -1.47
USP48-206ENST00000464577 C2orf91Q6ZV80 131 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 ERASQ7Z444 233 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 Q86TA4 180 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 FLYWCH2Q96CP2 140 aaKnown RBP5.86□□□□□ -1.47
USP48-206ENST00000464577 RNF24Q9Y225 148 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 LINC00312Q9Y6C7 94 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 DSCAML1Q8TD84 2053 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 TRAV8-6A0A0B4J262 113 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 GAGE12BA1L429 117 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 SPRY3O43610 288 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 PLP1P60201 277 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 PAX2Q02962 417 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 MEF2CQ06413 473 aaPredicted RBP5.86□□□□□ -1.47
USP48-206ENST00000464577 FAM201AQ5SY85 155 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 BPIFA4PQ86YQ2 179 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 OR4C13Q8NGP0 309 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 BLNKQ8WV28 456 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 RND1Q92730 232 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 CSTL1Q9H114 145 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 OTORQ9NRC9 128 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 MRPL36Q9P0J6 103 aaKnown RBP5.86□□□□□ -1.47
USP48-206ENST00000464577 PROCRQ9UNN8 238 aa5.86□□□□□ -1.47
USP48-206ENST00000464577 TANC2Q9HCD6 1990 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 A0A087X0K7 114 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 C7orf71A4D174 169 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 C22orf46C9J442 243 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 E7EUB6 86 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 OVOL3O00110 214 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 PLAUP00749 431 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 HOXB4P17483 251 aaPredicted RBP5.85□□□□□ -1.47
USP48-206ENST00000464577 HTR1DP28221 377 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 ZNF137PP52743 207 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 TMEM97Q5BJF2 176 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 TEX36Q5VZQ5 186 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 UFSP1Q6NVU6 142 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 FAM216BQ8N7L0 139 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 OR1B1Q8NGR6 318 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 OR1N2Q8NGR9 330 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 NEU4Q8WWR8 484 aaPredicted RBP5.85□□□□□ -1.47
USP48-206ENST00000464577 SARAFQ96BY9 339 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 CCL13Q99616 98 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 ZNF747Q9BV97 191 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 Q9H3A6 140 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 RPH3ALQ9UNE2 315 aa5.85□□□□□ -1.47
USP48-206ENST00000464577 H3BRM9 83 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 IGLV2-23P01705 113 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 FAM87AP0C7U9 286 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 ORM2P19652 201 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 CD24P25063 80 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 CSN1S1P47710 185 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 RIGQ13278 110 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 GTF2H5Q6ZYL4 71 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 C8orf31Q8N9H6 132 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 SGK494Q96LW2 274 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 AP5S1Q9NUS5 200 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 TMEM14CQ9P0S9 112 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 ZNRD1Q9P1U0 126 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 WDR87Q6ZQQ6 2873 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 MYO15AQ9UKN7 3530 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 A0A1B0GUT8 65 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 A0A1W2PPI3 338 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 A6NDN8 102 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 IGHV1-46P01743 117 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 FGF6P10767 208 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 COL8A1P27658 744 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 TNFAIP6P98066 277 aaPredicted RBP5.84□□□□□ -1.47
USP48-206ENST00000464577 VMA21Q3ZAQ7 101 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 PRR31Q5SQ13 230 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 TIMM23BQ5SRD1 257 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 C10orf55Q5SWW7 151 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 Q6AWC8 147 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 LINC00311Q8N616 119 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 TMEM116Q8NCL8 245 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 OR10AG1Q8NH19 301 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 C8orf46Q8TAG6 207 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms