RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 KIR3DL3Q8N743 410 aa7.1□□□□□ -1.27
SHQ1-203ENST00000463369 OR1B1Q8NGR6 318 aa7.1□□□□□ -1.27
SHQ1-203ENST00000463369 FGFBP3Q8TAT2 258 aa7.1□□□□□ -1.27
SHQ1-203ENST00000463369 MRPL53Q96EL3 112 aaKnown RBP7.1□□□□□ -1.27
SHQ1-203ENST00000463369 TNFRSF19Q9NS68 423 aa7.1□□□□□ -1.27
SHQ1-203ENST00000463369 TECRQ9NZ01 308 aaKnown RBP7.1□□□□□ -1.27
SHQ1-203ENST00000463369 IGKV3D-15A0A087WSY6 115 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 IZUMO1RA6ND01 250 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 ZNHIT1O43257 154 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 SYNGR1O43759 233 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 MT-CO2P00403 227 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 CGAP01215 116 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 CRYBB3P26998 211 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 LY6DQ14210 128 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 FXYD3Q14802 87 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 LINC01620Q4KN68 170 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 UFSP1Q6NVU6 142 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 PQLC2Q6ZP29 291 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 DOLPP1Q86YN1 238 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 PRRG4Q9BZD6 226 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 ZNF331Q9NQX6 463 aaPredicted RBP7.09□□□□□ -1.27
SHQ1-203ENST00000463369 CLCF1Q9UBD9 225 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 DUSP13Q9UII6 198 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 ARL2-SNX15V9GYD0 113 aa7.09□□□□□ -1.27
SHQ1-203ENST00000463369 CACNA1BQ00975 2339 aa7.09□□□□□ -1.28
SHQ1-203ENST00000463369 ESPL1Q14674 2120 aa7.09□□□□□ -1.28
SHQ1-203ENST00000463369 HLA-DRB1P01911 266 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 ZNF816Q0VGE8 651 aaPredicted RBP7.08□□□□□ -1.28
SHQ1-203ENST00000463369 SPINK9Q5DT21 86 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 MIC13Q5XKP0 118 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 RASL11AQ6T310 242 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 TREML4Q6UXN2 200 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 FAM57AQ8TBR7 257 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 MGST2Q99735 147 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 USP24Q9UPU5 2620 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 hDV102S1A0JD36 115 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 FOXH1O75593 365 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 PCBD1P61457 104 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 RPL30P62888 115 aaKnown RBP7.08□□□□□ -1.28
SHQ1-203ENST00000463369 TIGITQ495A1 244 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 PRR30Q53SZ7 412 aaPredicted RBP7.08□□□□□ -1.28
SHQ1-203ENST00000463369 TEPPQ6URK8 271 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 MOB1BQ7L9L4 216 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 C5orf17Q8NAS9 161 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 ZNF488Q96MN9 340 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 GGTLC1Q9BX51 225 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 MAP1LC3CQ9BXW4 147 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 SCRT2Q9NQ03 307 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 ATRXP46100 2492 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 COL6A6A6NMZ7 2263 aa7.08□□□□□ -1.28
SHQ1-203ENST00000463369 PCNX1Q96RV3 2341 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 C7orf71A4D174 169 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 RBMXL2O75526 392 aaKnown RBP7.07□□□□□ -1.28
SHQ1-203ENST00000463369 BRWD1-AS2P59051 145 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 HIST1H1AQ02539 215 aaPredicted RBP7.07□□□□□ -1.28
SHQ1-203ENST00000463369 EIF4EBP1Q13541 118 aaPredicted RBP7.07□□□□□ -1.28
SHQ1-203ENST00000463369 IBA57Q5T440 356 aaKnown RBP7.07□□□□□ -1.28
SHQ1-203ENST00000463369 SAMD13Q5VXD3 122 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 ZNF562Q6V9R5 426 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 GTF2H5Q6ZYL4 71 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 H2BFWTQ7Z2G1 175 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 NEGR1Q7Z3B1 354 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 ZNF645Q8N7E2 425 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 OR2T6Q8NHC8 308 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 UBALD1Q8TB05 177 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 ZNF835Q9Y2P0 537 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 FAM231BA6NCW3 169 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 NPIPB6E9PJ23 425 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 SYS1-DBNDD2H3BUS1 97 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 VCYO14598 125 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 IGLV2-8P01709 118 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 GPR6P46095 362 aaPredicted RBP7.07□□□□□ -1.28
SHQ1-203ENST00000463369 PLP1P60201 277 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 FAM120AOSQ5T036 256 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 SPATA31B1PQ5VZV4 182 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 GFRALQ6UXV0 394 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 ZNF497Q6ZNH5 498 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 AAED1Q7RTV5 226 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 ZC2HC1AQ96GY0 325 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 TRAPPC2LQ9UL33 140 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 OR51B2Q9Y5P1 312 aa7.07□□□□□ -1.28
SHQ1-203ENST00000463369 C17orf98A8MV24 154 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 SCGB1A1P11684 91 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 GPR183P32249 361 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 RPL8P62917 257 aaKnown RBP7.06□□□□□ -1.28
SHQ1-203ENST00000463369 GUSBP1Q15486 140 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 GDF5OSQ5U4N7 250 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 SLC35E4Q6ICL7 350 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 Q6P435 159 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 OR1N2Q8NGR9 330 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 URB1-AS1Q96HZ7 61 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 MS4A6AQ9H2W1 248 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 FNDC4Q9H6D8 234 aaPredicted RBP7.06□□□□□ -1.28
SHQ1-203ENST00000463369 NPVFQ9HCQ7 196 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 SERTAD4Q9NUC0 356 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 KCNIP1Q9NZI2 227 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 SMPXQ9UHP9 88 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 USF3Q68DE3 2245 aa7.06□□□□□ -1.28
SHQ1-203ENST00000463369 HEATR1Q9H583 2144 aaKnown RBP7.06□□□□□ -1.28
SHQ1-203ENST00000463369 A0A0A0MQY5 61 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms