RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ST8SIA2Q92186 375 aa14.44□□□□□ -0.1
VARS-221ENST00000463184 MS4A6AQ9H2W1 248 aa14.44□□□□□ -0.1
VARS-221ENST00000463184 HEYLQ9NQ87 328 aaPredicted RBP14.44□□□□□ -0.1
VARS-221ENST00000463184 TRAV2A0A0B4J234 112 aa14.43□□□□□ -0.1
VARS-221ENST00000463184 SNRPGP15A8MWD9 76 aa14.43□□□□□ -0.1
VARS-221ENST00000463184 C11orf94C9JXX5 98 aa14.43□□□□□ -0.1
VARS-221ENST00000463184 DEFB4AO15263 64 aa14.43□□□□□ -0.1
VARS-221ENST00000463184 IGHV3-48P01763 117 aa14.43□□□□□ -0.1
VARS-221ENST00000463184 DEFB131AP59861 70 aa14.43□□□□□ -0.1
VARS-221ENST00000463184 TOMM20LQ6UXN7 152 aa14.43□□□□□ -0.1
VARS-221ENST00000463184 PINX1Q96BK5 328 aaKnown RBP14.43□□□□□ -0.1
VARS-221ENST00000463184 RBKSQ9H477 322 aa14.43□□□□□ -0.1
VARS-221ENST00000463184 APLNQ9ULZ1 77 aa14.43□□□□□ -0.1
VARS-221ENST00000463184 VPS13DQ5THJ4 4388 aa14.43□□□□□ -0.1
VARS-221ENST00000463184 HECTD4Q9Y4D8 3996 aa14.42□□□□□ -0.1
VARS-221ENST00000463184 MED6O75586 246 aa14.42□□□□□ -0.1
VARS-221ENST00000463184 RNASE2P10153 161 aaKnown RBP14.42□□□□□ -0.1
VARS-221ENST00000463184 HTR2BP41595 481 aa14.42□□□□□ -0.1
VARS-221ENST00000463184 NPBWR1P48145 328 aa14.42□□□□□ -0.1
VARS-221ENST00000463184 LILRB2Q8N423 598 aa14.42□□□□□ -0.1
VARS-221ENST00000463184 DTD1Q8TEA8 209 aa14.42□□□□□ -0.1
VARS-221ENST00000463184 HRH4Q9H3N8 390 aa14.42□□□□□ -0.1
VARS-221ENST00000463184 IGLL5B9A064 214 aa14.41□□□□□ -0.1
VARS-221ENST00000463184 APOHP02749 345 aaPredicted RBP14.41□□□□□ -0.1
VARS-221ENST00000463184 RPL11P62913 178 aaKnown RBP14.41□□□□□ -0.1
VARS-221ENST00000463184 IAH1Q2TAA2 248 aaPredicted RBP14.41□□□□□ -0.1
VARS-221ENST00000463184 BSXQ3C1V8 233 aa14.41□□□□□ -0.1
VARS-221ENST00000463184 LEMD1Q68G75 181 aa14.41□□□□□ -0.1
VARS-221ENST00000463184 PVRIGQ6DKI7 326 aa14.41□□□□□ -0.1
VARS-221ENST00000463184 ZNF600Q6ZNG1 722 aa14.41□□□□□ -0.1
VARS-221ENST00000463184 STHQ8IWL8 128 aa14.41□□□□□ -0.1
VARS-221ENST00000463184 ID3Q02535 119 aa14.4□□□□□ -0.1
VARS-221ENST00000463184 TMEM41BQ5BJD5 291 aa14.4□□□□□ -0.1
VARS-221ENST00000463184 ZBTB8BQ8NAP8 495 aaPredicted RBP14.4□□□□□ -0.1
VARS-221ENST00000463184 Q8NAQ8 132 aa14.4□□□□□ -0.1
VARS-221ENST00000463184 OR4D5Q8NGN0 318 aa14.4□□□□□ -0.1
VARS-221ENST00000463184 TMEM231Q9H6L2 316 aa14.4□□□□□ -0.1
VARS-221ENST00000463184 PUS1Q9Y606 427 aaKnown RBP eCLIP14.4□□□□□ -0.1
VARS-221ENST00000463184 U3KQ87 197 aa14.4□□□□□ -0.1
VARS-221ENST00000463184 DNAH6Q9C0G6 4158 aa14.4□□□□□ -0.1
VARS-221ENST00000463184 CORTO00230 105 aa14.39□□□□□ -0.11
VARS-221ENST00000463184 CCSO14618 274 aa14.39□□□□□ -0.11
VARS-221ENST00000463184 SYNGR2O43760 224 aa14.39□□□□□ -0.11
VARS-221ENST00000463184 NKX2-1P43699 371 aaPredicted RBP14.39□□□□□ -0.11
VARS-221ENST00000463184 RGS21Q2M5E4 152 aa14.39□□□□□ -0.11
VARS-221ENST00000463184 C2orf83Q53S99 150 aa14.39□□□□□ -0.11
VARS-221ENST00000463184 NOXA1Q86UR1 476 aa14.39□□□□□ -0.11
VARS-221ENST00000463184 SLC24A4Q8NFF2 622 aa14.39□□□□□ -0.11
VARS-221ENST00000463184 ZFAND3Q9H8U3 227 aa14.39□□□□□ -0.11
VARS-221ENST00000463184 IGHV3-66A0A0C4DH42 116 aa14.38□□□□□ -0.11
VARS-221ENST00000463184 A0A1W2PS18 150 aa14.38□□□□□ -0.11
VARS-221ENST00000463184 C5orf51A6NDU8 294 aa14.38□□□□□ -0.11
VARS-221ENST00000463184 FAM25EA8MYX2 175 aa14.38□□□□□ -0.11
VARS-221ENST00000463184 TMEM50AO95807 157 aa14.38□□□□□ -0.11
VARS-221ENST00000463184 ATP5IP56385 69 aaPredicted RBP14.38□□□□□ -0.11
VARS-221ENST00000463184 FAM24BQ8N5W8 94 aa14.38□□□□□ -0.11
VARS-221ENST00000463184 CIB3Q96Q77 187 aaPredicted RBP14.38□□□□□ -0.11
VARS-221ENST00000463184 MAGT1Q9H0U3 335 aa14.38□□□□□ -0.11
VARS-221ENST00000463184 GSKIPQ9P0R6 139 aa14.38□□□□□ -0.11
VARS-221ENST00000463184 RABAC1Q9UI14 185 aa14.38□□□□□ -0.11
VARS-221ENST00000463184 IFNA10P01566 189 aa14.37□□□□□ -0.11
VARS-221ENST00000463184 MIFP14174 115 aa14.37□□□□□ -0.11
VARS-221ENST00000463184 NPPCP23582 126 aa14.37□□□□□ -0.11
VARS-221ENST00000463184 NPY1RP25929 384 aa14.37□□□□□ -0.11
VARS-221ENST00000463184 MORN3Q6PF18 240 aaPredicted RBP14.37□□□□□ -0.11
VARS-221ENST00000463184 GSG1LQ6UXU4 331 aa14.37□□□□□ -0.11
VARS-221ENST00000463184 C2orf50Q96LR7 162 aa14.37□□□□□ -0.11
VARS-221ENST00000463184 C7orf66A4D0T2 115 aa14.36□□□□□ -0.11
VARS-221ENST00000463184 WRBO00258 174 aa14.36□□□□□ -0.11
VARS-221ENST00000463184 GIG44P09565 113 aaPredicted RBP14.36□□□□□ -0.11
VARS-221ENST00000463184 RBMY1A1P0DJD3 496 aaKnown RBP14.36□□□□□ -0.11
VARS-221ENST00000463184 RBMY1CP0DJD4 496 aa14.36□□□□□ -0.11
VARS-221ENST00000463184 SPP1P10451 314 aa14.36□□□□□ -0.11
VARS-221ENST00000463184 IAPPP10997 89 aa14.36□□□□□ -0.11
VARS-221ENST00000463184 RBMY1FQ15415 496 aaKnown RBP14.36□□□□□ -0.11
VARS-221ENST00000463184 TRPT1Q86TN4 253 aaKnown RBP14.36□□□□□ -0.11
VARS-221ENST00000463184 RNASEH2CQ8TDP1 164 aaKnown RBP14.36□□□□□ -0.11
VARS-221ENST00000463184 GRAMD2BQ96HH9 432 aa14.36□□□□□ -0.11
VARS-221ENST00000463184 TRAV10A0A0B4J240 114 aa14.35□□□□□ -0.11
VARS-221ENST00000463184 IGHV4-28A0A0C4DH34 117 aa14.35□□□□□ -0.11
VARS-221ENST00000463184 SSNA1O43805 119 aa14.35□□□□□ -0.11
VARS-221ENST00000463184 HLA-DMBP28068 263 aa14.35□□□□□ -0.11
VARS-221ENST00000463184 POLR2GP62487 172 aaKnown RBP eCLIP14.35□□□□□ -0.11
VARS-221ENST00000463184 RPP30P78346 268 aaKnown RBP14.35□□□□□ -0.11
VARS-221ENST00000463184 TMEM170AQ8WVE7 144 aa14.35□□□□□ -0.11
VARS-221ENST00000463184 RPS10-NUDT3A0A1W2PQS6 291 aa14.34□□□□□ -0.11
VARS-221ENST00000463184 ZNF705EA8MWA4 302 aaPredicted RBP14.34□□□□□ -0.11
VARS-221ENST00000463184 K7EQG2 157 aa14.34□□□□□ -0.11
VARS-221ENST00000463184 SCGB1D2O95969 90 aa14.34□□□□□ -0.11
VARS-221ENST00000463184 OPRK1P41145 380 aa14.34□□□□□ -0.11
VARS-221ENST00000463184 OXA1LQ15070 435 aa14.34□□□□□ -0.11
VARS-221ENST00000463184 LINC00336Q6ZUF6 198 aa14.34□□□□□ -0.11
VARS-221ENST00000463184 STXBP6Q8NFX7 210 aa14.34□□□□□ -0.11
VARS-221ENST00000463184 METTL26Q96S19 204 aa14.34□□□□□ -0.11
VARS-221ENST00000463184 ALG5Q9Y673 324 aa14.34□□□□□ -0.11
VARS-221ENST00000463184 GOSR2O14653 212 aa14.33□□□□□ -0.12
VARS-221ENST00000463184 MBPP02686 304 aaPredicted RBP14.33□□□□□ -0.12
VARS-221ENST00000463184 CRYBB3P26998 211 aa14.33□□□□□ -0.12
VARS-221ENST00000463184 RAB11AP62491 216 aa14.33□□□□□ -0.12
VARS-221ENST00000463184 FNDC4Q9H6D8 234 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms