RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 MRPL36Q9P0J6 103 aaKnown RBP6.33□□□□□ -1.4
HDAC9-220ENST00000461409 CRYM-AS1A6NIL9 109 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 DEFB4AO15263 64 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 DEDDO75618 318 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 HNRNPCP07910 306 aaKnown RBP eCLIP6.32□□□□□ -1.4
HDAC9-220ENST00000461409 GIG44P09565 113 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-220ENST00000461409 AKAIN1P0CW23 69 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 SMIM18P0DKX4 95 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 SULT1A3P0DMM9 295 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 SULT1A4P0DMN0 295 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 NUP62P37198 522 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-220ENST00000461409 NUTF2P61970 127 aaKnown RBP6.32□□□□□ -1.4
HDAC9-220ENST00000461409 SNRPD3P62318 126 aaKnown RBP6.32□□□□□ -1.4
HDAC9-220ENST00000461409 DHRS2Q13268 280 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 ACTL10Q5JWF8 245 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 KRTAP5-3Q6L8H2 238 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 FAAP20Q6NZ36 180 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 PRSS54Q6PEW0 395 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 GPR141Q7Z602 305 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 SELENOHQ8IZQ5 122 aaKnown RBP6.32□□□□□ -1.4
HDAC9-220ENST00000461409 DCANP1Q8TF63 244 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 IL22RA2Q969J5 263 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 SCGB3A2Q96PL1 93 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 RTBDNQ9BSG5 229 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-220ENST00000461409 SEPSECSQ9HD40 501 aaKnown RBP6.32□□□□□ -1.4
HDAC9-220ENST00000461409 PFDN2Q9UHV9 154 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 TMEM56-RWDD3S4R434 201 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 FRAS1Q86XX4 4008 aa6.32□□□□□ -1.4
HDAC9-220ENST00000461409 PIGBOS1A0A0B4J2F0 54 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 IGHV4-28A0A0C4DH34 117 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 KNCNA6PVL3 124 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 ZNF705EA8MWA4 302 aaPredicted RBP6.31□□□□□ -1.4
HDAC9-220ENST00000461409 CTDSPLO15194 276 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 IL4P05112 153 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 RD3LP0DJH9 198 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 NPY1RP25929 384 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 NMSQ5H8A3 153 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 PSMG4Q5JS54 123 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 C16orf54Q6UWD8 224 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 OR4C16Q8NGL9 310 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 LHFPL5Q8TAF8 219 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 GLMPQ8WWB7 406 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 GPR146Q96CH1 333 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 C1QTNF4Q9BXJ3 329 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 MRPS26Q9BYN8 205 aaKnown RBP6.31□□□□□ -1.4
HDAC9-220ENST00000461409 MIXL1Q9H2W2 232 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 NRN1Q9NPD7 142 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 SCP2D1Q9UJQ7 156 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 TBC1D24Q9ULP9 559 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 KCNIP3Q9Y2W7 256 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 U3KQ87 197 aa6.31□□□□□ -1.4
HDAC9-220ENST00000461409 TRAV10A0A0B4J240 114 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 IGLL5B9A064 214 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 FAM90A26D6RGX4 464 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 CTDSP2O14595 271 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 TOMM40O96008 361 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 IFNA10P01566 189 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 RBMY1A1P0DJD3 496 aaKnown RBP6.3□□□□□ -1.4
HDAC9-220ENST00000461409 RBMY1CP0DJD4 496 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 ANXA3P12429 323 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 C4BPBP20851 252 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 CCR6P51684 374 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 ATP5IP56385 69 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-220ENST00000461409 SRPXP78539 464 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 IL18Q14116 193 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 RBMY1FQ15415 496 aaKnown RBP6.3□□□□□ -1.4
HDAC9-220ENST00000461409 USF2Q15853 346 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-220ENST00000461409 CLVS1Q8IUQ0 354 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-220ENST00000461409 OR51S1Q8NGJ8 323 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 RAB2BQ8WUD1 216 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 NPIPB3Q92617 1050 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 ACY3Q96HD9 319 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 DIRAS2Q96HU8 199 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 RAB40CQ96S21 281 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 CCDC59Q9P031 241 aaKnown RBP6.3□□□□□ -1.4
HDAC9-220ENST00000461409 RSL24D1Q9UHA3 163 aaKnown RBP6.3□□□□□ -1.4
HDAC9-220ENST00000461409 GPR132Q9UNW8 380 aa6.3□□□□□ -1.4
HDAC9-220ENST00000461409 A0A0B4J2A0 478 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 ANKRD20A5PA0PJZ0 165 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 BUB3O43684 328 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 FABP1P07148 127 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 HLA-DMBP28068 263 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 ALDH3B2P48448 385 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 KLF9Q13886 244 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-220ENST00000461409 SMCO1Q147U7 214 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 SPCS2Q15005 226 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 TEPPQ6URK8 271 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 SIGLEC15Q6ZMC9 328 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 LGI3Q8N145 548 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 OR51G1Q8NGK1 321 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 DTD1Q8TEA8 209 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 TMEM170AQ8WVE7 144 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 BCL7BQ9BQE9 202 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 MCUBQ9NWR8 336 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 CLEC5AQ9NY25 188 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 HSPB7Q9UBY9 170 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 SHPKQ9UHJ6 478 aa6.29□□□□□ -1.4
HDAC9-220ENST00000461409 HECTD4Q9Y4D8 3996 aa6.28□□□□□ -1.4
HDAC9-220ENST00000461409 NOL3O60936 208 aaKnown RBP6.28□□□□□ -1.4
HDAC9-220ENST00000461409 NXPH3O95157 252 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms