RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 STRAPQ9Y3F4 350 aaKnown RBP11.43□□□□□ -0.58
VARS-219ENST00000461328 PSG1P11464 419 aa11.42□□□□□ -0.58
VARS-219ENST00000461328 RPL35AP18077 110 aaKnown RBP11.42□□□□□ -0.58
VARS-219ENST00000461328 ZNF846Q147U1 533 aa11.42□□□□□ -0.58
VARS-219ENST00000461328 USF2Q15853 346 aaPredicted RBP11.42□□□□□ -0.58
VARS-219ENST00000461328 OR51G1Q8NGK1 321 aa11.42□□□□□ -0.58
VARS-219ENST00000461328 OR4D5Q8NGN0 318 aa11.42□□□□□ -0.58
VARS-219ENST00000461328 SEC22CQ9BRL7 303 aa11.42□□□□□ -0.58
VARS-219ENST00000461328 MAP6D1Q9H9H5 199 aa11.42□□□□□ -0.58
VARS-219ENST00000461328 GSKIPQ9P0R6 139 aa11.42□□□□□ -0.58
VARS-219ENST00000461328 FAM25EA8MYX2 175 aa11.41□□□□□ -0.58
VARS-219ENST00000461328 CCSO14618 274 aa11.41□□□□□ -0.58
VARS-219ENST00000461328 H2AFB2P0C5Z0 115 aa11.41□□□□□ -0.58
VARS-219ENST00000461328 LYZP61626 148 aa11.41□□□□□ -0.58
VARS-219ENST00000461328 AKR1C1Q04828 323 aa11.41□□□□□ -0.58
VARS-219ENST00000461328 ZBTB8BQ8NAP8 495 aaPredicted RBP11.41□□□□□ -0.58
VARS-219ENST00000461328 ENKURQ8TC29 256 aa11.41□□□□□ -0.58
VARS-219ENST00000461328 RNF125Q96EQ8 232 aa11.41□□□□□ -0.58
VARS-219ENST00000461328 PSENENQ9NZ42 101 aa11.41□□□□□ -0.58
VARS-219ENST00000461328 TBC1D24Q9ULP9 559 aa11.41□□□□□ -0.58
VARS-219ENST00000461328 TRAV2A0A0B4J234 112 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 SMCO3A2RU48 225 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 HELTA6NFD8 242 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 NUP62P37198 522 aaPredicted RBP11.4□□□□□ -0.58
VARS-219ENST00000461328 ID3Q02535 119 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 ZNF90Q03938 601 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 ASAH1Q13510 395 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 OR2F1Q13607 317 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 ZNF124Q15973 351 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 OR8G2PQ6IF36 304 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 ACOT7LQ6ZUV0 252 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 STPG3Q8N7X2 389 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 IL17DQ8TAD2 202 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 ZNF431Q8TF32 576 aaPredicted RBP11.4□□□□□ -0.58
VARS-219ENST00000461328 PPP1R14BQ96C90 147 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 PFDN2Q9UHV9 154 aa11.4□□□□□ -0.58
VARS-219ENST00000461328 C5orf51A6NDU8 294 aa11.39□□□□□ -0.59
VARS-219ENST00000461328 UPK1BO75841 260 aa11.39□□□□□ -0.59
VARS-219ENST00000461328 DEFB131AP59861 70 aa11.39□□□□□ -0.59
VARS-219ENST00000461328 C16orf54Q6UWD8 224 aa11.39□□□□□ -0.59
VARS-219ENST00000461328 BATF3Q9NR55 127 aa11.39□□□□□ -0.59
VARS-219ENST00000461328 IGKV1D-37A0A075B6S9 117 aa11.38□□□□□ -0.59
VARS-219ENST00000461328 AP2S1P53680 142 aaPredicted RBP11.38□□□□□ -0.59
VARS-219ENST00000461328 DEFB135Q30KP9 77 aa11.38□□□□□ -0.59
VARS-219ENST00000461328 LEMD1Q68G75 181 aa11.38□□□□□ -0.59
VARS-219ENST00000461328 C12orf45Q8N5I9 185 aaPredicted RBP11.38□□□□□ -0.59
VARS-219ENST00000461328 GLMPQ8WWB7 406 aa11.38□□□□□ -0.59
VARS-219ENST00000461328 RAB40CQ96S21 281 aa11.38□□□□□ -0.59
VARS-219ENST00000461328 TRGV9Q99603 122 aa11.38□□□□□ -0.59
VARS-219ENST00000461328 OVOL2Q9BRP0 275 aa11.38□□□□□ -0.59
VARS-219ENST00000461328 U3KQE9 123 aa11.38□□□□□ -0.59
VARS-219ENST00000461328 DNAH7Q8WXX0 4024 aa11.38□□□□□ -0.59
VARS-219ENST00000461328 KIR2DL5BA0A0G2JN68 375 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 KIR2DL5BA0A0G2JPC4 375 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 SNRPGP15A8MWD9 76 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 PRSS46E5RG02 174 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 K7EQG2 157 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 L7N2F9 121 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 UBE2CO00762 179 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 ZNF688P0C7X2 276 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 VAMP2P63027 116 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 SIGLEC15Q6ZMC9 328 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 Q6ZWC4 215 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 KIR2DL5AQ8N109 375 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 FAM24BQ8N5W8 94 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 THAP8Q8NA92 274 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 KIR2DL5BQ8NHK3 375 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 SMIM8Q96KF7 97 aa11.37□□□□□ -0.59
VARS-219ENST00000461328 RCL1Q9Y2P8 373 aaKnown RBP11.37□□□□□ -0.59
VARS-219ENST00000461328 METTL15P1P0C7V9 234 aa11.36□□□□□ -0.59
VARS-219ENST00000461328 RRAS2P62070 204 aaPredicted RBP11.36□□□□□ -0.59
VARS-219ENST00000461328 STHQ8IWL8 128 aa11.36□□□□□ -0.59
VARS-219ENST00000461328 TP53TG1Q9Y2A0 90 aa11.36□□□□□ -0.59
VARS-219ENST00000461328 LSM5Q9Y4Y9 91 aaKnown RBP11.36□□□□□ -0.59
VARS-219ENST00000461328 IGKV1OR2-108A0A075B7D4 117 aa11.35□□□□□ -0.59
VARS-219ENST00000461328 SPRY2O43597 315 aa11.35□□□□□ -0.59
VARS-219ENST00000461328 BUB3O43684 328 aa11.35□□□□□ -0.59
VARS-219ENST00000461328 TSC22D2O75157 780 aa11.35□□□□□ -0.59
VARS-219ENST00000461328 MBPP02686 304 aaPredicted RBP11.35□□□□□ -0.59
VARS-219ENST00000461328 BPIFCQ8NFQ6 507 aa11.35□□□□□ -0.59
VARS-219ENST00000461328 OR10P1Q8NGE3 313 aa11.35□□□□□ -0.59
VARS-219ENST00000461328 DCANP1Q8TF63 244 aa11.35□□□□□ -0.59
VARS-219ENST00000461328 GPN1Q9HCN4 374 aaPredicted RBP11.35□□□□□ -0.59
VARS-219ENST00000461328 MGAT4CQ9UBM8 478 aa11.35□□□□□ -0.59
VARS-219ENST00000461328 LCE6AA0A183 80 aa11.34□□□□□ -0.59
VARS-219ENST00000461328 CCNKO75909 580 aa11.34□□□□□ -0.59
VARS-219ENST00000461328 CFDP00746 253 aaPredicted RBP11.34□□□□□ -0.59
VARS-219ENST00000461328 BCAP31P51572 246 aa11.34□□□□□ -0.59
VARS-219ENST00000461328 TAS2R30P59541 319 aa11.34□□□□□ -0.59
VARS-219ENST00000461328 DEFA1P59665 94 aa11.34□□□□□ -0.59
VARS-219ENST00000461328 DEFA3P59666 94 aa11.34□□□□□ -0.59
VARS-219ENST00000461328 S100A10P60903 97 aa11.34□□□□□ -0.59
VARS-219ENST00000461328 SNRPD3P62318 126 aaKnown RBP11.34□□□□□ -0.59
VARS-219ENST00000461328 PSMG4Q5JS54 123 aa11.34□□□□□ -0.59
VARS-219ENST00000461328 GSG1LQ6UXU4 331 aa11.34□□□□□ -0.59
VARS-219ENST00000461328 TMEM144Q7Z5S9 345 aa11.34□□□□□ -0.59
VARS-219ENST00000461328 CSTL1Q9H114 145 aa11.34□□□□□ -0.59
VARS-219ENST00000461328 NRN1Q9NPD7 142 aa11.34□□□□□ -0.59
VARS-219ENST00000461328 FBXL17Q9UF56 701 aa11.34□□□□□ -0.59
VARS-219ENST00000461328 CA1P00915 261 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms