RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TMUB2Q71RG4 321 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 REC114Q7Z4M0 266 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 OR1L4Q8NGR5 311 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 GRAMD2BQ96HH9 432 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 METTL26Q96S19 204 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 PFDN5Q99471 154 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 MDFIQ99750 246 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 WDR61Q9GZS3 305 aaKnown RBP9.5□□□□□ -0.89
HDAC4-206ENST00000460235 DAZ1Q9NQZ3 744 aaKnown RBP9.5□□□□□ -0.89
HDAC4-206ENST00000460235 ZMAT5Q9UDW3 170 aaKnown RBP9.5□□□□□ -0.89
HDAC4-206ENST00000460235 SLC45A2Q9UMX9 530 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 LSM4Q9Y4Z0 139 aaKnown RBP9.5□□□□□ -0.89
HDAC4-206ENST00000460235 TIMM9Q9Y5J7 89 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 ADARB2-AS1A8MUL3 147 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 F8W735 103 aaPredicted RBP9.49□□□□□ -0.89
HDAC4-206ENST00000460235 OVOL1O14753 267 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 BCL2L11O43521 198 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 TSPAN15O95858 294 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 MBP02144 154 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 HNRNPCP07910 306 aaKnown RBP eCLIP9.49□□□□□ -0.89
HDAC4-206ENST00000460235 PSG1P11464 419 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 NPPCP23582 126 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 ADMP35318 185 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 SERF2P84101 59 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 DEFB136Q30KP8 78 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 OR11H4Q8NGC9 324 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 RNF2Q99496 336 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 CHRDL1Q9BU40 450 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 C20orf24Q9BUV8 137 aa9.49□□□□□ -0.89
HDAC4-206ENST00000460235 PUS1Q9Y606 427 aaKnown RBP eCLIP9.49□□□□□ -0.89
HDAC4-206ENST00000460235 HYPMO75409 117 aa9.48□□□□□ -0.89
HDAC4-206ENST00000460235 TRBV12-3P01733 135 aa9.48□□□□□ -0.89
HDAC4-206ENST00000460235 IL4P05112 153 aa9.48□□□□□ -0.89
HDAC4-206ENST00000460235 TPT1P13693 172 aaKnown RBP9.48□□□□□ -0.89
HDAC4-206ENST00000460235 CD33P20138 364 aa9.48□□□□□ -0.89
HDAC4-206ENST00000460235 INSL3P51460 131 aa9.48□□□□□ -0.89
HDAC4-206ENST00000460235 SYNJ2BPP57105 145 aa9.48□□□□□ -0.89
HDAC4-206ENST00000460235 C18orf65Q6ZTR6 163 aa9.48□□□□□ -0.89
HDAC4-206ENST00000460235 OR9G4Q8NGQ1 327 aa9.48□□□□□ -0.89
HDAC4-206ENST00000460235 TMEM190Q8WZ59 177 aa9.48□□□□□ -0.89
HDAC4-206ENST00000460235 RNF125Q96EQ8 232 aa9.48□□□□□ -0.89
HDAC4-206ENST00000460235 PSMG3Q9BT73 122 aaPredicted RBP9.48□□□□□ -0.89
HDAC4-206ENST00000460235 ZNF471Q9BX82 626 aaPredicted RBP9.48□□□□□ -0.89
HDAC4-206ENST00000460235 NPCDR1Q9BY65 106 aa9.48□□□□□ -0.89
HDAC4-206ENST00000460235 MRPL36Q9P0J6 103 aaKnown RBP9.48□□□□□ -0.89
HDAC4-206ENST00000460235 MRPL27Q9P0M9 148 aaKnown RBP9.48□□□□□ -0.89
HDAC4-206ENST00000460235 RABAC1Q9UI14 185 aa9.48□□□□□ -0.89
HDAC4-206ENST00000460235 A8MWP6 167 aa9.47□□□□□ -0.89
HDAC4-206ENST00000460235 LINC00869P0C866 280 aa9.47□□□□□ -0.89
HDAC4-206ENST00000460235 PLP1P60201 277 aa9.47□□□□□ -0.89
HDAC4-206ENST00000460235 LYZP61626 148 aa9.47□□□□□ -0.89
HDAC4-206ENST00000460235 B2MP61769 119 aa9.47□□□□□ -0.89
HDAC4-206ENST00000460235 OPCMLQ14982 345 aa9.47□□□□□ -0.89
HDAC4-206ENST00000460235 TOMM20LQ6UXN7 152 aa9.47□□□□□ -0.89
HDAC4-206ENST00000460235 SLC51BQ86UW2 128 aa9.47□□□□□ -0.89
HDAC4-206ENST00000460235 MGST2Q99735 147 aa9.47□□□□□ -0.89
HDAC4-206ENST00000460235 GGTLC1Q9BX51 225 aa9.47□□□□□ -0.89
HDAC4-206ENST00000460235 SLC39A9Q9NUM3 307 aa9.47□□□□□ -0.89
HDAC4-206ENST00000460235 COL6A5A8TX70 2615 aa9.46□□□□□ -0.89
HDAC4-206ENST00000460235 IGKV1D-37A0A075B6S9 117 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 IGKV1OR2-108A0A075B7D4 117 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 WI2-2373I1.2A0A1W2PRP0 233 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 COX7A2P2O60397 106 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 CXCL2P19875 107 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 SLURP1P55000 103 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 ZNF90Q03938 601 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 ACOT6Q3I5F7 207 aaPredicted RBP9.46□□□□□ -0.9
HDAC4-206ENST00000460235 LGALSLQ3ZCW2 172 aaPredicted RBP9.46□□□□□ -0.9
HDAC4-206ENST00000460235 STPG3Q8N7X2 389 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 GATAD1Q8WUU5 269 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 RCC1LQ96I51 464 aaKnown RBP9.46□□□□□ -0.9
HDAC4-206ENST00000460235 PBDC1Q9BVG4 233 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 DNAJC4Q9NNZ3 241 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 SIGLEC8Q9NYZ4 499 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 TECRQ9NZ01 308 aaKnown RBP9.46□□□□□ -0.9
HDAC4-206ENST00000460235 HIGD1AQ9Y241 93 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 PXMP4Q9Y6I8 212 aa9.46□□□□□ -0.9
HDAC4-206ENST00000460235 ZFHX3Q15911 3703 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 IGHV3-35A0A0C4DH35 117 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 OR5G3P0C626 314 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 ORM2P19652 201 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 PRR31Q5SQ13 230 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 C1orf194Q5T5A4 169 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 C9orf66Q5T8R8 295 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 C10orf113Q5VZT2 155 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 RPL7L1Q6DKI1 246 aaKnown RBP9.45□□□□□ -0.9
HDAC4-206ENST00000460235 LAMTOR1Q6IAA8 161 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 BAP18Q8IXM2 172 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 LINC00482Q8N8I6 264 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 HSD17B11Q8NBQ5 300 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 WFDC9Q8NEX5 89 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 OR1B1Q8NGR6 318 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 DYNLRB2Q8TF09 96 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 DLX4Q92988 240 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-206ENST00000460235 GPR82Q96P67 336 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 DUX3Q96PT4 197 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 WFDC1Q9HC57 220 aa9.45□□□□□ -0.9
HDAC4-206ENST00000460235 A0A1W2PPV4 95 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 HELTA6NFD8 242 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 UMAD1C9J7I0 102 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms