RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 ASAH1Q13510 395 aa13.69□□□□□ -0.22
HOXD3-204ENST00000459979 C16orf54Q6UWD8 224 aa13.69□□□□□ -0.22
HOXD3-204ENST00000459979 KIR2DL5AQ8N109 375 aa13.69□□□□□ -0.22
HOXD3-204ENST00000459979 GBGT1Q8N5D6 347 aa13.69□□□□□ -0.22
HOXD3-204ENST00000459979 THAP8Q8NA92 274 aa13.69□□□□□ -0.22
HOXD3-204ENST00000459979 OR51G1Q8NGK1 321 aa13.69□□□□□ -0.22
HOXD3-204ENST00000459979 KIR2DL5BQ8NHK3 375 aa13.69□□□□□ -0.22
HOXD3-204ENST00000459979 SMIM8Q96KF7 97 aa13.69□□□□□ -0.22
HOXD3-204ENST00000459979 WDR12Q9GZL7 423 aaKnown RBP13.69□□□□□ -0.22
HOXD3-204ENST00000459979 NUDT15Q9NV35 164 aa13.69□□□□□ -0.22
HOXD3-204ENST00000459979 TBC1D24Q9ULP9 559 aa13.69□□□□□ -0.22
HOXD3-204ENST00000459979 STRAPQ9Y3F4 350 aaKnown RBP13.69□□□□□ -0.22
HOXD3-204ENST00000459979 IGKV3-7A0A075B6H7 116 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 TRAV6A0A075B6T7 132 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 FAM240BA0A1B0GVZ2 78 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 HELTA6NFD8 242 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 ZFP92A6NM28 416 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 UBE2CO00762 179 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 BUB3O43684 328 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 FABP1P07148 127 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 TFPI2P48307 235 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 APOC4P55056 127 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 ZNF846Q147U1 533 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 IAH1Q2TAA2 248 aaPredicted RBP13.68□□□□□ -0.22
HOXD3-204ENST00000459979 SPANXN5Q5MJ07 72 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 MZT2BQ6NZ67 158 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 GLMPQ8WWB7 406 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 TRGV9Q99603 122 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 MAP6D1Q9H9H5 199 aa13.68□□□□□ -0.22
HOXD3-204ENST00000459979 K7EQG2 157 aa13.67□□□□□ -0.22
HOXD3-204ENST00000459979 DNASE2O00115 360 aaPredicted RBP13.67□□□□□ -0.22
HOXD3-204ENST00000459979 JTBO76095 146 aa13.67□□□□□ -0.22
HOXD3-204ENST00000459979 H2AFB2P0C5Z0 115 aa13.67□□□□□ -0.22
HOXD3-204ENST00000459979 EIF2B2P49770 351 aaKnown RBP13.67□□□□□ -0.22
HOXD3-204ENST00000459979 AP2S1P53680 142 aaPredicted RBP13.67□□□□□ -0.22
HOXD3-204ENST00000459979 RPL11P62913 178 aaKnown RBP13.67□□□□□ -0.22
HOXD3-204ENST00000459979 Q6ZWC4 215 aa13.67□□□□□ -0.22
HOXD3-204ENST00000459979 ZBTB8BQ8NAP8 495 aaPredicted RBP13.67□□□□□ -0.22
HOXD3-204ENST00000459979 ZNF431Q8TF32 576 aaPredicted RBP13.67□□□□□ -0.22
HOXD3-204ENST00000459979 RNF125Q96EQ8 232 aa13.67□□□□□ -0.22
HOXD3-204ENST00000459979 RABAC1Q9UI14 185 aa13.67□□□□□ -0.22
HOXD3-204ENST00000459979 IGKV1OR2-108A0A075B7D4 117 aa13.66□□□□□ -0.22
HOXD3-204ENST00000459979 UPK1BO75841 260 aa13.66□□□□□ -0.22
HOXD3-204ENST00000459979 PAX9P55771 341 aa13.66□□□□□ -0.22
HOXD3-204ENST00000459979 TAS2R30P59541 319 aa13.66□□□□□ -0.22
HOXD3-204ENST00000459979 ZNF90Q03938 601 aa13.66□□□□□ -0.22
HOXD3-204ENST00000459979 OR8G2PQ6IF36 304 aa13.66□□□□□ -0.22
HOXD3-204ENST00000459979 APRG1Q8IVJ8 170 aa13.66□□□□□ -0.22
HOXD3-204ENST00000459979 DCANP1Q8TF63 244 aa13.66□□□□□ -0.22
HOXD3-204ENST00000459979 RAB40CQ96S21 281 aa13.66□□□□□ -0.22
HOXD3-204ENST00000459979 PSENENQ9NZ42 101 aa13.66□□□□□ -0.22
HOXD3-204ENST00000459979 PAIP2BQ9ULR5 123 aaKnown RBP13.66□□□□□ -0.22
HOXD3-204ENST00000459979 TP53TG1Q9Y2A0 90 aa13.66□□□□□ -0.22
HOXD3-204ENST00000459979 PMS2P5A8MQ11 134 aa13.65□□□□□ -0.22
HOXD3-204ENST00000459979 SNRPGP15A8MWD9 76 aa13.65□□□□□ -0.22
HOXD3-204ENST00000459979 H3BP45 60 aa13.65□□□□□ -0.22
HOXD3-204ENST00000459979 CFDP00746 253 aaPredicted RBP13.65□□□□□ -0.22
HOXD3-204ENST00000459979 NUP62P37198 522 aaPredicted RBP13.65□□□□□ -0.22
HOXD3-204ENST00000459979 WFDC3Q8IUB2 231 aa13.65□□□□□ -0.22
HOXD3-204ENST00000459979 OVOL2Q9BRP0 275 aa13.65□□□□□ -0.22
HOXD3-204ENST00000459979 PFDN2Q9UHV9 154 aa13.65□□□□□ -0.22
HOXD3-204ENST00000459979 SSSCA1O60232 199 aa13.64□□□□□ -0.23
HOXD3-204ENST00000459979 TMEM14EPQ6UXP3 125 aa13.64□□□□□ -0.23
HOXD3-204ENST00000459979 C12orf45Q8N5I9 185 aaPredicted RBP13.64□□□□□ -0.23
HOXD3-204ENST00000459979 STPG3Q8N7X2 389 aa13.64□□□□□ -0.23
HOXD3-204ENST00000459979 SEC22CQ9BRL7 303 aa13.64□□□□□ -0.23
HOXD3-204ENST00000459979 SEPSECSQ9HD40 501 aaKnown RBP13.64□□□□□ -0.23
HOXD3-204ENST00000459979 TSC22D2O75157 780 aa13.63□□□□□ -0.23
HOXD3-204ENST00000459979 IL5P05113 134 aa13.63□□□□□ -0.23
HOXD3-204ENST00000459979 DEFB131AP59861 70 aa13.63□□□□□ -0.23
HOXD3-204ENST00000459979 IFITM3Q01628 133 aa13.63□□□□□ -0.23
HOXD3-204ENST00000459979 ZNF124Q15973 351 aa13.63□□□□□ -0.23
HOXD3-204ENST00000459979 TMEM144Q7Z5S9 345 aa13.63□□□□□ -0.23
HOXD3-204ENST00000459979 FAM24BQ8N5W8 94 aa13.63□□□□□ -0.23
HOXD3-204ENST00000459979 STXBP6Q8NFX7 210 aa13.63□□□□□ -0.23
HOXD3-204ENST00000459979 GSKIPQ9P0R6 139 aa13.63□□□□□ -0.23
HOXD3-204ENST00000459979 RCL1Q9Y2P8 373 aaKnown RBP13.63□□□□□ -0.23
HOXD3-204ENST00000459979 FNDC10F2Z333 226 aa13.62□□□□□ -0.23
HOXD3-204ENST00000459979 MBPP02686 304 aaPredicted RBP13.62□□□□□ -0.23
HOXD3-204ENST00000459979 C1orf194Q5T5A4 169 aa13.62□□□□□ -0.23
HOXD3-204ENST00000459979 ACOT7LQ6ZUV0 252 aa13.62□□□□□ -0.23
HOXD3-204ENST00000459979 SLC45A2Q9UMX9 530 aa13.62□□□□□ -0.23
HOXD3-204ENST00000459979 AGRNO00468 2067 aa13.61□□□□□ -0.23
HOXD3-204ENST00000459979 SCGB1D2O95969 90 aa13.61□□□□□ -0.23
HOXD3-204ENST00000459979 RPL35AP18077 110 aaKnown RBP13.61□□□□□ -0.23
HOXD3-204ENST00000459979 SIGLEC15Q6ZMC9 328 aa13.61□□□□□ -0.23
HOXD3-204ENST00000459979 IL17DQ8TAD2 202 aa13.61□□□□□ -0.23
HOXD3-204ENST00000459979 RNF183Q96D59 192 aa13.61□□□□□ -0.23
HOXD3-204ENST00000459979 PBDC1Q9BVG4 233 aa13.61□□□□□ -0.23
HOXD3-204ENST00000459979 CSTL1Q9H114 145 aa13.61□□□□□ -0.23
HOXD3-204ENST00000459979 NRN1Q9NPD7 142 aa13.61□□□□□ -0.23
HOXD3-204ENST00000459979 ALMS1Q8TCU4 4167 aa13.6□□□□□ -0.23
HOXD3-204ENST00000459979 C7orf66A4D0T2 115 aa13.6□□□□□ -0.23
HOXD3-204ENST00000459979 CCSO14618 274 aa13.6□□□□□ -0.23
HOXD3-204ENST00000459979 SPRY2O43597 315 aa13.6□□□□□ -0.23
HOXD3-204ENST00000459979 LYZP61626 148 aa13.6□□□□□ -0.23
HOXD3-204ENST00000459979 DLK1P80370 383 aa13.6□□□□□ -0.23
HOXD3-204ENST00000459979 IL15RAQ13261 267 aa13.6□□□□□ -0.23
HOXD3-204ENST00000459979 OR2F1Q13607 317 aa13.6□□□□□ -0.23
HOXD3-204ENST00000459979 ENKURQ8TC29 256 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms