RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 MMDQ15546 238 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 TCF24Q7RTU0 167 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 KIR3DL3Q8N743 410 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 MBD6Q96DN6 1003 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 ASCL2Q99929 193 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 PPIAL4EA0A075B759 164 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 PPIAL4DF5H284 164 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 SIAH2O43255 324 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 HYPMO75409 117 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 TOX4O94842 621 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 PPIAL4FP0DN26 164 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 OR4C13Q8NGP0 309 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 CACNG8Q8WXS5 425 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 POLEQ07864 2286 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 SVEP1Q4LDE5 3571 aa11.36□□□□□ -0.59
SCFD1-203ENST00000458591 RIF1Q5UIP0 2472 aaKnown RBP11.36□□□□□ -0.59
SCFD1-203ENST00000458591 SH2D7A6NKC9 451 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-203ENST00000458591 TMEM178BH3BS89 294 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 PMCHL1Q16048 86 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 WIPF2Q8TF74 440 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-203ENST00000458591 TP73-AS1Q9UF72 201 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 LAMTOR2Q9Y2Q5 125 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 LRBAP50851 2863 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 ZNF292O60281 2723 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 DCHS2Q6V1P9 2916 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 PGPA6NDG6 321 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 FAM87AP0C7U9 286 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 TBR1Q16650 682 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 TMEM108Q6UXF1 575 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 ST6GALNAC6Q969X2 333 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 CLEC7AQ9BXN2 247 aa11.35□□□□□ -0.59
SCFD1-203ENST00000458591 HIGD1CA8MV81 97 aa11.34□□□□□ -0.59
SCFD1-203ENST00000458591 LYNX1G3V0Z9 82 aa11.34□□□□□ -0.59
SCFD1-203ENST00000458591 SLC25A5P05141 298 aaKnown RBP11.34□□□□□ -0.59
SCFD1-203ENST00000458591 LYNX1P0DP58 116 aa11.34□□□□□ -0.59
SCFD1-203ENST00000458591 TNFRSF1AP19438 455 aa11.34□□□□□ -0.59
SCFD1-203ENST00000458591 SPATA12Q7Z6I5 190 aa11.34□□□□□ -0.59
SCFD1-203ENST00000458591 LOXP28300 417 aaPredicted RBP11.34□□□□□ -0.59
SCFD1-203ENST00000458591 C3orf36Q3SXR2 165 aa11.34□□□□□ -0.59
SCFD1-203ENST00000458591 IGFL3Q6UXB1 125 aa11.34□□□□□ -0.59
SCFD1-203ENST00000458591 Q6ZVH6 145 aa11.34□□□□□ -0.59
SCFD1-203ENST00000458591 PRSS33Q8NF86 280 aa11.34□□□□□ -0.59
SCFD1-203ENST00000458591 NUP37Q8NFH4 326 aa11.34□□□□□ -0.59
SCFD1-203ENST00000458591 FAM57AQ8TBR7 257 aa11.34□□□□□ -0.59
SCFD1-203ENST00000458591 C7orf69Q9H7B7 122 aa11.34□□□□□ -0.59
SCFD1-203ENST00000458591 TNFRSF19Q9NS68 423 aa11.34□□□□□ -0.59
SCFD1-203ENST00000458591 HSBP1O75506 76 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 EBLN2Q6P2I7 272 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 FAM231DQ6ZW35 169 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 GRAMD2BQ96HH9 432 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 CHRDL1Q9BU40 450 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 WASHC3Q9Y3C0 194 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 C16orf97H3BN30 126 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 KLK10O43240 276 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 NDUFB3O43676 98 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 TCF21O43680 179 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 MYCNOSP40205 109 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 FOXA3P55318 350 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-203ENST00000458591 MEF2CQ06413 473 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-203ENST00000458591 TMEM30BQ3MIR4 351 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 OR2D3Q8NGH3 330 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 EPDR1Q9UM22 224 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 ZGRF1Q86YA3 2104 aa11.33□□□□□ -0.6
SCFD1-203ENST00000458591 TRAV8-1A0A0A6YYK1 113 aa11.32□□□□□ -0.6
SCFD1-203ENST00000458591 IGLC7A0M8Q6 106 aa11.32□□□□□ -0.6
SCFD1-203ENST00000458591 RNASEKQ6P5S7 137 aaKnown RBP11.32□□□□□ -0.6
SCFD1-203ENST00000458591 PDPNQ86YL7 162 aa11.32□□□□□ -0.6
SCFD1-203ENST00000458591 STPG4Q8N801 248 aa11.32□□□□□ -0.6
SCFD1-203ENST00000458591 THAP8Q8NA92 274 aa11.32□□□□□ -0.6
SCFD1-203ENST00000458591 OR1L4Q8NGR5 311 aa11.32□□□□□ -0.6
SCFD1-203ENST00000458591 URB1-AS1Q96HZ7 61 aa11.32□□□□□ -0.6
SCFD1-203ENST00000458591 SSUH2Q9Y2M2 353 aa11.32□□□□□ -0.6
SCFD1-203ENST00000458591 C20orf202A1L168 122 aa11.32□□□□□ -0.6
SCFD1-203ENST00000458591 TNFRSF13BO14836 293 aaPredicted RBP11.32□□□□□ -0.6
SCFD1-203ENST00000458591 DLX6P56179 175 aa11.32□□□□□ -0.6
SCFD1-203ENST00000458591 UBE2G1P62253 170 aa11.32□□□□□ -0.6
SCFD1-203ENST00000458591 ORAOV1Q8WV07 137 aa11.32□□□□□ -0.6
SCFD1-203ENST00000458591 CLEC5AQ9NY25 188 aa11.32□□□□□ -0.6
SCFD1-203ENST00000458591 M0R2Z0 102 aa11.31□□□□□ -0.6
SCFD1-203ENST00000458591 ZNF137PP52743 207 aa11.31□□□□□ -0.6
SCFD1-203ENST00000458591 BPIFB3P59826 476 aa11.31□□□□□ -0.6
SCFD1-203ENST00000458591 Q56UQ5 140 aa11.31□□□□□ -0.6
SCFD1-203ENST00000458591 ALKBH7Q9BT30 221 aaPredicted RBP11.31□□□□□ -0.6
SCFD1-203ENST00000458591 MRPS16Q9Y3D3 137 aaKnown RBP11.31□□□□□ -0.6
SCFD1-203ENST00000458591 APC2O95996 2303 aa11.31□□□□□ -0.6
SCFD1-203ENST00000458591 NBEAP1P0C6P0 100 aa11.31□□□□□ -0.6
SCFD1-203ENST00000458591 TSPOP30536 169 aa11.31□□□□□ -0.6
SCFD1-203ENST00000458591 KLF5Q13887 457 aaPredicted RBP11.31□□□□□ -0.6
SCFD1-203ENST00000458591 LRRC10Q5BKY1 277 aa11.31□□□□□ -0.6
SCFD1-203ENST00000458591 GTSF1Q8WW33 167 aa11.31□□□□□ -0.6
SCFD1-203ENST00000458591 TMEM186Q96B77 213 aa11.31□□□□□ -0.6
SCFD1-203ENST00000458591 PGLYRP4Q96LB8 373 aa11.31□□□□□ -0.6
SCFD1-203ENST00000458591 ACACAQ13085 2346 aa11.3□□□□□ -0.6
SCFD1-203ENST00000458591 FAM181BA6NEQ2 426 aa11.3□□□□□ -0.6
SCFD1-203ENST00000458591 IGHV1-8P0DP01 117 aa11.3□□□□□ -0.6
SCFD1-203ENST00000458591 HIST1H1EP10412 219 aaKnown RBP11.3□□□□□ -0.6
SCFD1-203ENST00000458591 SUB1P53999 127 aaKnown RBP eCLIP11.3□□□□□ -0.61e-7■■■■□ 20.1
SCFD1-203ENST00000458591 PRR30Q53SZ7 412 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-203ENST00000458591 LINC00173Q6ZV60 143 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms