RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ZBTB8BQ8NAP8 495 aaPredicted RBP13.46□□□□□ -0.25
PDLIM2-215ENST00000456545 STXBP6Q8NFX7 210 aa13.46□□□□□ -0.25
PDLIM2-215ENST00000456545 OR4D5Q8NGN0 318 aa13.46□□□□□ -0.25
PDLIM2-215ENST00000456545 FAM110AQ9BQ89 295 aa13.46□□□□□ -0.25
PDLIM2-215ENST00000456545 SEC22CQ9BRL7 303 aa13.46□□□□□ -0.25
PDLIM2-215ENST00000456545 SNRPGP15A8MWD9 76 aa13.45□□□□□ -0.26
PDLIM2-215ENST00000456545 AP2S1P53680 142 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-215ENST00000456545 ODF3L2Q3SX64 289 aa13.45□□□□□ -0.26
PDLIM2-215ENST00000456545 APRG1Q8IVJ8 170 aa13.45□□□□□ -0.26
PDLIM2-215ENST00000456545 SMIM8Q96KF7 97 aa13.45□□□□□ -0.26
PDLIM2-215ENST00000456545 CITED4Q96RK1 184 aa13.45□□□□□ -0.26
PDLIM2-215ENST00000456545 TBC1D24Q9ULP9 559 aa13.45□□□□□ -0.26
PDLIM2-215ENST00000456545 SMCO3A2RU48 225 aa13.44□□□□□ -0.26
PDLIM2-215ENST00000456545 HELTA6NFD8 242 aa13.44□□□□□ -0.26
PDLIM2-215ENST00000456545 CCSO14618 274 aa13.44□□□□□ -0.26
PDLIM2-215ENST00000456545 RPL35AP18077 110 aaKnown RBP13.44□□□□□ -0.26
PDLIM2-215ENST00000456545 ZNF90Q03938 601 aa13.44□□□□□ -0.26
PDLIM2-215ENST00000456545 AKR1C1Q04828 323 aa13.44□□□□□ -0.26
PDLIM2-215ENST00000456545 OR2F1Q13607 317 aa13.44□□□□□ -0.26
PDLIM2-215ENST00000456545 USF2Q15853 346 aaPredicted RBP13.44□□□□□ -0.26
PDLIM2-215ENST00000456545 OR8G2PQ6IF36 304 aa13.44□□□□□ -0.26
PDLIM2-215ENST00000456545 PPP1R14BQ96C90 147 aa13.44□□□□□ -0.26
PDLIM2-215ENST00000456545 RNF125Q96EQ8 232 aa13.44□□□□□ -0.26
PDLIM2-215ENST00000456545 RAB40CQ96S21 281 aa13.44□□□□□ -0.26
PDLIM2-215ENST00000456545 RETNQ9HD89 108 aa13.44□□□□□ -0.26
PDLIM2-215ENST00000456545 L7N2F9 121 aa13.43□□□□□ -0.26
PDLIM2-215ENST00000456545 NUP62P37198 522 aaPredicted RBP13.43□□□□□ -0.26
PDLIM2-215ENST00000456545 LYZP61626 148 aa13.43□□□□□ -0.26
PDLIM2-215ENST00000456545 VAMP2P63027 116 aa13.43□□□□□ -0.26
PDLIM2-215ENST00000456545 STPG3Q8N7X2 389 aa13.43□□□□□ -0.26
PDLIM2-215ENST00000456545 TRGV9Q99603 122 aa13.43□□□□□ -0.26
PDLIM2-215ENST00000456545 GPN1Q9HCN4 374 aaPredicted RBP13.43□□□□□ -0.26
PDLIM2-215ENST00000456545 TRAV2A0A0B4J234 112 aa13.42□□□□□ -0.26
PDLIM2-215ENST00000456545 C16orf54Q6UWD8 224 aa13.42□□□□□ -0.26
PDLIM2-215ENST00000456545 MAP6D1Q9H9H5 199 aa13.42□□□□□ -0.26
PDLIM2-215ENST00000456545 U3KQE9 123 aa13.42□□□□□ -0.26
PDLIM2-215ENST00000456545 IGKV1D-37A0A075B6S9 117 aa13.41□□□□□ -0.26
PDLIM2-215ENST00000456545 CFDP00746 253 aaPredicted RBP13.41□□□□□ -0.26
PDLIM2-215ENST00000456545 DEFA1P59665 94 aa13.41□□□□□ -0.26
PDLIM2-215ENST00000456545 DEFA3P59666 94 aa13.41□□□□□ -0.26
PDLIM2-215ENST00000456545 DEFB131AP59861 70 aa13.41□□□□□ -0.26
PDLIM2-215ENST00000456545 GSG1LQ6UXU4 331 aa13.41□□□□□ -0.26
PDLIM2-215ENST00000456545 THAP8Q8NA92 274 aa13.41□□□□□ -0.26
PDLIM2-215ENST00000456545 OR10P1Q8NGE3 313 aa13.41□□□□□ -0.26
PDLIM2-215ENST00000456545 LSM5Q9Y4Y9 91 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-215ENST00000456545 C3orf84H3BNL1 204 aa13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 UBE2CO00762 179 aa13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 MBPP02686 304 aaPredicted RBP13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 IL5P05113 134 aa13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 METTL15P1P0C7V9 234 aa13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 BCAP31P51572 246 aa13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 TAS2R30P59541 319 aa13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 ZNF124Q15973 351 aa13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 ACOT7LQ6ZUV0 252 aa13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 BPIFCQ8NFQ6 507 aa13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 MUC7Q8TAX7 377 aa13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 C2orf50Q96LR7 162 aa13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 MGAT4CQ9UBM8 478 aa13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 RCL1Q9Y2P8 373 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-215ENST00000456545 KIR2DL5BA0A0G2JN68 375 aa13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 KIR2DL5BA0A0G2JPC4 375 aa13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 PRSS46E5RG02 174 aa13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 BUB3O43684 328 aa13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 TSC22D2O75157 780 aa13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 PVALBP20472 110 aaPredicted RBP13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 S100A7P31151 101 aa13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 PAX9P55771 341 aa13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 RRAS2P62070 204 aaPredicted RBP13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 LEMD1Q68G75 181 aa13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 SIGLEC15Q6ZMC9 328 aa13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 KIR2DL5AQ8N109 375 aa13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 KIR2DL5BQ8NHK3 375 aa13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 GLMPQ8WWB7 406 aa13.39□□□□□ -0.27
PDLIM2-215ENST00000456545 K7EQG2 157 aa13.38□□□□□ -0.27
PDLIM2-215ENST00000456545 ZNF688P0C7X2 276 aa13.38□□□□□ -0.27
PDLIM2-215ENST00000456545 LYL1P12980 280 aa13.38□□□□□ -0.27
PDLIM2-215ENST00000456545 IFITM3Q01628 133 aa13.38□□□□□ -0.27
PDLIM2-215ENST00000456545 TMEM144Q7Z5S9 345 aa13.38□□□□□ -0.27
PDLIM2-215ENST00000456545 STHQ8IWL8 128 aa13.38□□□□□ -0.27
PDLIM2-215ENST00000456545 NPVFQ9HCQ7 196 aa13.38□□□□□ -0.27
PDLIM2-215ENST00000456545 FBXL17Q9UF56 701 aa13.38□□□□□ -0.27
PDLIM2-215ENST00000456545 IGKV1OR2-108A0A075B7D4 117 aa13.37□□□□□ -0.27
PDLIM2-215ENST00000456545 C7orf66A4D0T2 115 aa13.37□□□□□ -0.27
PDLIM2-215ENST00000456545 INMT-MINDY4F8WBC2 141 aa13.37□□□□□ -0.27
PDLIM2-215ENST00000456545 SPRY2O43597 315 aa13.37□□□□□ -0.27
PDLIM2-215ENST00000456545 ORM2P19652 201 aa13.37□□□□□ -0.27
PDLIM2-215ENST00000456545 S100A10P60903 97 aa13.37□□□□□ -0.27
PDLIM2-215ENST00000456545 DLK1P80370 383 aa13.37□□□□□ -0.27
PDLIM2-215ENST00000456545 TMEM14EPQ6UXP3 125 aa13.37□□□□□ -0.27
PDLIM2-215ENST00000456545 Q6ZWC4 215 aa13.37□□□□□ -0.27
PDLIM2-215ENST00000456545 NRARPQ7Z6K4 114 aa13.37□□□□□ -0.27
PDLIM2-215ENST00000456545 FAM24BQ8N5W8 94 aa13.37□□□□□ -0.27
PDLIM2-215ENST00000456545 CSTL1Q9H114 145 aa13.37□□□□□ -0.27
PDLIM2-215ENST00000456545 K7EPK0 472 aa13.36□□□□□ -0.27
PDLIM2-215ENST00000456545 PRAF2O60831 178 aa13.36□□□□□ -0.27
PDLIM2-215ENST00000456545 CAV2P51636 162 aa13.36□□□□□ -0.27
PDLIM2-215ENST00000456545 SNRPD3P62318 126 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-215ENST00000456545 DEFB135Q30KP9 77 aa13.36□□□□□ -0.27
PDLIM2-215ENST00000456545 OR8I2Q8N0Y5 310 aa13.36□□□□□ -0.27
PDLIM2-215ENST00000456545 OVOL2Q9BRP0 275 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms