RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 CCDC32Q9BV29 185 aa13.01□□□□□ -0.33
COL13A1-206ENST00000456019 SACSQ9NZJ4 4579 aa13.01□□□□□ -0.33
COL13A1-206ENST00000456019 CXorf65A6NEN9 183 aa13□□□□□ -0.33
COL13A1-206ENST00000456019 NAP1L6A6NFF2 107 aa13□□□□□ -0.33
COL13A1-206ENST00000456019 PLA2G10O15496 165 aa13□□□□□ -0.33
COL13A1-206ENST00000456019 MED6O75586 246 aa13□□□□□ -0.33
COL13A1-206ENST00000456019 PSG1P11464 419 aa13□□□□□ -0.33
COL13A1-206ENST00000456019 DCANP1Q8TF63 244 aa13□□□□□ -0.33
COL13A1-206ENST00000456019 GLMPQ8WWB7 406 aa13□□□□□ -0.33
COL13A1-206ENST00000456019 SLC35E1Q96K37 410 aa13□□□□□ -0.33
COL13A1-206ENST00000456019 ZFP92A6NM28 416 aa12.99□□□□□ -0.33
COL13A1-206ENST00000456019 CA1P00915 261 aaPredicted RBP12.99□□□□□ -0.33
COL13A1-206ENST00000456019 IAPPP10997 89 aa12.99□□□□□ -0.33
COL13A1-206ENST00000456019 BTCP35070 178 aa12.99□□□□□ -0.33
COL13A1-206ENST00000456019 RAB11AP62491 216 aa12.99□□□□□ -0.33
COL13A1-206ENST00000456019 EWSR1Q01844 656 aaKnown RBP eCLIP12.99□□□□□ -0.33
COL13A1-206ENST00000456019 PMS2P11Q13670 270 aa12.99□□□□□ -0.33
COL13A1-206ENST00000456019 GAMTQ14353 236 aa12.99□□□□□ -0.33
COL13A1-206ENST00000456019 OR51G1Q8NGK1 321 aa12.99□□□□□ -0.33
COL13A1-206ENST00000456019 CIB3Q96Q77 187 aaPredicted RBP12.99□□□□□ -0.33
COL13A1-206ENST00000456019 RARRES2Q99969 163 aa12.99□□□□□ -0.33
COL13A1-206ENST00000456019 C7orf50Q9BRJ6 194 aaKnown RBP12.99□□□□□ -0.33
COL13A1-206ENST00000456019 LINC00854A0A1B0GVQ3 168 aa12.98□□□□□ -0.33
COL13A1-206ENST00000456019 FABP1P07148 127 aa12.98□□□□□ -0.33
COL13A1-206ENST00000456019 HOXB5P09067 269 aa12.98□□□□□ -0.33
COL13A1-206ENST00000456019 ZNF688P0C7X2 276 aa12.98□□□□□ -0.33
COL13A1-206ENST00000456019 NUP62P37198 522 aaPredicted RBP12.98□□□□□ -0.33
COL13A1-206ENST00000456019 RPP30P78346 268 aaKnown RBP12.98□□□□□ -0.33
COL13A1-206ENST00000456019 DHRS2Q13268 280 aa12.98□□□□□ -0.33
COL13A1-206ENST00000456019 RNF125Q96EQ8 232 aa12.98□□□□□ -0.33
COL13A1-206ENST00000456019 PFDN2Q9UHV9 154 aa12.98□□□□□ -0.33
COL13A1-206ENST00000456019 NUPR2A6NF83 97 aa12.97□□□□□ -0.33
COL13A1-206ENST00000456019 BUB3O43684 328 aa12.97□□□□□ -0.33
COL13A1-206ENST00000456019 NDUFB6O95139 128 aa12.97□□□□□ -0.33
COL13A1-206ENST00000456019 GGNBP1Q5YKI7 109 aa12.97□□□□□ -0.33
COL13A1-206ENST00000456019 OR11H2Q8NH07 326 aa12.97□□□□□ -0.33
COL13A1-206ENST00000456019 WDR12Q9GZL7 423 aaKnown RBP12.97□□□□□ -0.33
COL13A1-206ENST00000456019 PAIP2BQ9ULR5 123 aaKnown RBP12.97□□□□□ -0.33
COL13A1-206ENST00000456019 IGKV1D-37A0A075B6S9 117 aa12.96□□□□□ -0.33
COL13A1-206ENST00000456019 CENPXA8MT69 81 aa12.96□□□□□ -0.33
COL13A1-206ENST00000456019 SYNGR2O43760 224 aa12.96□□□□□ -0.33
COL13A1-206ENST00000456019 ZNF846Q147U1 533 aa12.96□□□□□ -0.33
COL13A1-206ENST00000456019 OR8G2PQ6IF36 304 aa12.96□□□□□ -0.33
COL13A1-206ENST00000456019 SIGLEC15Q6ZMC9 328 aa12.96□□□□□ -0.33
COL13A1-206ENST00000456019 TRPT1Q86TN4 253 aaKnown RBP12.96□□□□□ -0.33
COL13A1-206ENST00000456019 PBDC1Q9BVG4 233 aa12.96□□□□□ -0.33
COL13A1-206ENST00000456019 MAGT1Q9H0U3 335 aa12.96□□□□□ -0.33
COL13A1-206ENST00000456019 NRN1Q9NPD7 142 aa12.96□□□□□ -0.33
COL13A1-206ENST00000456019 C9orf170A2RU37 121 aa12.95□□□□□ -0.34
COL13A1-206ENST00000456019 KNCNA6PVL3 124 aa12.95□□□□□ -0.34
COL13A1-206ENST00000456019 WRBO00258 174 aa12.95□□□□□ -0.34
COL13A1-206ENST00000456019 SPP1P10451 314 aa12.95□□□□□ -0.34
COL13A1-206ENST00000456019 SNRPD3P62318 126 aaKnown RBP12.95□□□□□ -0.34
COL13A1-206ENST00000456019 ZNF90Q03938 601 aa12.95□□□□□ -0.34
COL13A1-206ENST00000456019 TMEM41BQ5BJD5 291 aa12.95□□□□□ -0.34
COL13A1-206ENST00000456019 PSMG4Q5JS54 123 aa12.95□□□□□ -0.34
COL13A1-206ENST00000456019 MORN3Q6PF18 240 aaPredicted RBP12.95□□□□□ -0.34
COL13A1-206ENST00000456019 COQ8AQ8NI60 647 aa12.95□□□□□ -0.34
COL13A1-206ENST00000456019 SEPSECSQ9HD40 501 aaKnown RBP12.95□□□□□ -0.34
COL13A1-206ENST00000456019 SNRPGP15A8MWD9 76 aa12.94□□□□□ -0.34
COL13A1-206ENST00000456019 LYRM1O43325 122 aa12.94□□□□□ -0.34
COL13A1-206ENST00000456019 IFITM3Q01628 133 aa12.94□□□□□ -0.34
COL13A1-206ENST00000456019 ACTL10Q5JWF8 245 aa12.94□□□□□ -0.34
COL13A1-206ENST00000456019 CEMP1Q6PRD7 247 aaPredicted RBP12.94□□□□□ -0.34
COL13A1-206ENST00000456019 TRGV9Q99603 122 aa12.94□□□□□ -0.34
COL13A1-206ENST00000456019 C11orf68Q9H3H3 251 aaKnown RBP12.94□□□□□ -0.34
COL13A1-206ENST00000456019 TBC1D24Q9ULP9 559 aa12.94□□□□□ -0.34
COL13A1-206ENST00000456019 FLVCR2Q9UPI3 526 aa12.94□□□□□ -0.34
COL13A1-206ENST00000456019 UPK1BO75841 260 aa12.93□□□□□ -0.34
COL13A1-206ENST00000456019 OR4E1P0C645 316 aa12.93□□□□□ -0.34
COL13A1-206ENST00000456019 LYZP61626 148 aa12.93□□□□□ -0.34
COL13A1-206ENST00000456019 SPANXN5Q5MJ07 72 aa12.93□□□□□ -0.34
COL13A1-206ENST00000456019 THAP8Q8NA92 274 aa12.93□□□□□ -0.34
COL13A1-206ENST00000456019 RAB40CQ96S21 281 aa12.93□□□□□ -0.34
COL13A1-206ENST00000456019 KLK5Q9Y337 293 aaPredicted RBP12.93□□□□□ -0.34
COL13A1-206ENST00000456019 ADAP1O75689 374 aa12.92□□□□□ -0.34
COL13A1-206ENST00000456019 IFNA21P01568 189 aa12.92□□□□□ -0.34
COL13A1-206ENST00000456019 GIG44P09565 113 aaPredicted RBP12.92□□□□□ -0.34
COL13A1-206ENST00000456019 OR2F1Q13607 317 aa12.92□□□□□ -0.34
COL13A1-206ENST00000456019 C1orf194Q5T5A4 169 aa12.92□□□□□ -0.34
COL13A1-206ENST00000456019 FBXL17Q9UF56 701 aa12.92□□□□□ -0.34
COL13A1-206ENST00000456019 STRAPQ9Y3F4 350 aaKnown RBP12.92□□□□□ -0.34
COL13A1-206ENST00000456019 IGKV1OR2-108A0A075B7D4 117 aa12.91□□□□□ -0.34
COL13A1-206ENST00000456019 PRSS46E5RG02 174 aa12.91□□□□□ -0.34
COL13A1-206ENST00000456019 CFDP00746 253 aaPredicted RBP12.91□□□□□ -0.34
COL13A1-206ENST00000456019 ID3Q02535 119 aa12.91□□□□□ -0.34
COL13A1-206ENST00000456019 ASAH1Q13510 395 aa12.91□□□□□ -0.34
COL13A1-206ENST00000456019 C4orf46Q504U0 113 aa12.91□□□□□ -0.34
COL13A1-206ENST00000456019 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
COL13A1-206ENST00000456019 MFFQ9GZY8 342 aa12.91□□□□□ -0.34
COL13A1-206ENST00000456019 DNAH1Q9P2D7 4330 aa12.91□□□□□ -0.34
COL13A1-206ENST00000456019 H3BP45 60 aa12.9□□□□□ -0.34
COL13A1-206ENST00000456019 ANXA7P20073 488 aaKnown RBP12.9□□□□□ -0.34
COL13A1-206ENST00000456019 C4BPBP20851 252 aa12.9□□□□□ -0.34
COL13A1-206ENST00000456019 NKX2-1P43699 371 aaPredicted RBP12.9□□□□□ -0.34
COL13A1-206ENST00000456019 C11orf45Q8TAV5 145 aa12.9□□□□□ -0.34
COL13A1-206ENST00000456019 PHLDA1Q8WV24 401 aaPredicted RBP12.9□□□□□ -0.34
COL13A1-206ENST00000456019 PLECQ15149 4684 aaKnown RBP12.89□□□□□ -0.35
COL13A1-206ENST00000456019 TCRBP04435 133 aa12.89□□□□□ -0.35
COL13A1-206ENST00000456019 POLR2GP62487 172 aaKnown RBP eCLIP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms