RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 SLC25A37Q9NYZ2 338 aa1.5□□□□□ -2.17
LINC02540-201ENST00000455554 TAAR3PQ9P1P4 343 aa1.5□□□□□ -2.17
LINC02540-201ENST00000455554 CES1P1Q9UKY3 287 aa1.5□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF257Q9Y2Q1 563 aa1.5□□□□□ -2.17
LINC02540-201ENST00000455554 YTHDF2Q9Y5A9 579 aaKnown RBP1.5□□□□□ -2.17
LINC02540-201ENST00000455554 DNAJC15Q9Y5T4 150 aa1.5□□□□□ -2.17
LINC02540-201ENST00000455554 SPCS1Q9Y6A9 102 aa1.5□□□□□ -2.17
LINC02540-201ENST00000455554 PXMP4Q9Y6I8 212 aa1.5□□□□□ -2.17
LINC02540-201ENST00000455554 DOCK8Q8NF50 2099 aa1.5□□□□□ -2.17
LINC02540-201ENST00000455554 DOCK1Q14185 1865 aa1.5□□□□□ -2.17
LINC02540-201ENST00000455554 TRPM7Q96QT4 1865 aa1.5□□□□□ -2.17
LINC02540-201ENST00000455554 RGPD2P0DJD1 1756 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 NUMA1Q14980 2115 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 MED12LQ86YW9 2145 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 NUP188Q5SRE5 1749 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 PKD1L3Q7Z443 1732 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 C5P01031 1676 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 FAM208AQ9UK61 1670 aaKnown RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 MCM3APO60318 1980 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 NHSL1Q5SYE7 1610 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 THSD7BQ9C0I4 1608 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 IGLV8-61A0A075B6I0 122 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 IGHV3OR16-13A0A075B7E8 117 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 A0A0A6YYD5 115 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 IGHV7-81A0A0B4J1V7 117 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF816-ZNF321PA0A0X1KG74 233 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 MEIS3P1A6NDR6 274 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 EEF1E1-BLOC1S5C9J1V9 151 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 H3BUT2 72 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 ISLRO14498 428 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 NPFFO15130 113 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 MRPS12O15235 138 aaKnown RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 SOCS1O15524 211 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF737O75373 536 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 KLF7O75840 302 aaPredicted RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 DHRS3O75911 302 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 TNFP01375 233 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 SLC25A5P05141 298 aaKnown RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 SCTP09683 121 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 C3orf79P0CE67 100 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 IGLC6P0CF74 106 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 CNTFRP26992 372 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 PPP1CCP36873 323 aaKnown RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 GALR1P47211 349 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 SSR4P51571 173 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 RBM11P57052 281 aaKnown RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 PFN3P60673 137 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 CCL20P78556 96 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 SSBP1Q04837 148 aaKnown RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 FMODQ06828 376 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 FAM53BQ14153 422 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 WFDC2Q14508 124 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 INSL4Q14641 139 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 PMVKQ15126 192 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 HLA-DRB5Q30154 266 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 C2orf83Q53S99 150 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 TTC32Q5I0X7 151 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF678Q5SXM1 525 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 C1orf195Q5TG92 126 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 TSPO2Q5TGU0 170 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 TEX36Q5VZQ5 186 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 NCBP2-AS2Q69YL0 99 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 C11orf71Q6IPW1 123 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 SLC25A34Q6PIV7 304 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF322Q6U7Q0 402 aaPredicted RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 HRCT1Q6UXD1 115 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 Q6ZS92 163 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 PRSS41Q7RTY9 318 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 FAM19A1Q7Z5A9 133 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 TMEM86AQ8N2M4 240 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 TMEM252Q8N6L7 170 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 GATD1Q8NB37 220 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 VN1R2Q8NFZ6 395 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 OR5D14Q8NGL3 314 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 OR8S1Q8NH09 359 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 OR4K13Q8NH42 304 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 OR1L1Q8NH94 360 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 ACER1Q8TDN7 264 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 SLC37A2Q8TED4 501 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 GTSF1Q8WW33 167 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 RTN4IP1Q8WWV3 396 aaPredicted RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 FGF14Q92915 247 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 CLDN23Q96B33 292 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 ZC2HC1AQ96GY0 325 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 HIST1H4GQ99525 98 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 C20orf78Q9BR46 151 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 AGMATQ9BSE5 352 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 PARP12Q9H0J9 701 aaKnown RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 CST11Q9H112 138 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 RNASE7Q9H1E1 156 aaKnown RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 DEFB129Q9H1M3 183 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 SH3BGRL3Q9H299 93 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 EDA2RQ9HAV5 297 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 CMC2Q9NRP2 79 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 MTFP1Q9UDX5 166 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 TP53TG1Q9Y2A0 90 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 POLR1DQ9Y2S0 133 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 NOP16Q9Y3C1 178 aaKnown RBP1.49□□□□□ -2.17
LINC02540-201ENST00000455554 TRAPPC1Q9Y5R8 145 aa1.49□□□□□ -2.17
LINC02540-201ENST00000455554 HEBP2Q9Y5Z4 205 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms