RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 OR1N2Q8NGR9 330 aa12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 RSG1Q9BU20 258 aa12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 TIMM9Q9Y5J7 89 aa12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 C17orf112F2Z3M2 114 aa12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 NDUFA4O00483 81 aa12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 OR2C1O95371 312 aa12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 RD3LP0DJH9 198 aa12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 ZP3P21754 424 aa12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 ATP6V0CP27449 155 aa12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 EIF5AP63241 154 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 RPEL1Q2QD12 228 aa12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 GPHB5Q86YW7 130 aa12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 C3orf56Q8N813 242 aa12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 PSMG3Q9BT73 122 aaPredicted RBP12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 KCNIP2Q9NS61 270 aa12.73□□□□□ -0.37
CCDC90B-202ENST00000455220 IGHV3-35A0A0C4DH35 117 aa12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 CCL24O00175 119 aa12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 CFDP00746 253 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 LINC00869P0C866 280 aa12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 GATA2P23769 480 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 HOXD3P31249 432 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 SHISA2Q6UWI4 295 aa12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 BAP18Q8IXM2 172 aa12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 STPG3Q8N7X2 389 aa12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 ZNF709Q8N972 641 aa12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 BPIFCQ8NFQ6 507 aa12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 OR51G1Q8NGK1 321 aa12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 Q8WTZ3 238 aa12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 DPF1Q92782 380 aa12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 GNPNAT1Q96EK6 184 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 MDFIQ99750 246 aa12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 PUS1Q9Y606 427 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC90B-202ENST00000455220 TPT1P13693 172 aaKnown RBP12.71□□□□□ -0.37
CCDC90B-202ENST00000455220 PLP1P60201 277 aa12.71□□□□□ -0.37
CCDC90B-202ENST00000455220 B2MP61769 119 aa12.71□□□□□ -0.37
CCDC90B-202ENST00000455220 MIC13Q5XKP0 118 aa12.71□□□□□ -0.37
CCDC90B-202ENST00000455220 TOMM20LQ6UXN7 152 aa12.71□□□□□ -0.37
CCDC90B-202ENST00000455220 OR2G3Q8NGZ4 309 aa12.71□□□□□ -0.37
CCDC90B-202ENST00000455220 DUX3Q96PT4 197 aa12.71□□□□□ -0.37
CCDC90B-202ENST00000455220 PXMP4Q9Y6I8 212 aa12.71□□□□□ -0.37
CCDC90B-202ENST00000455220 WI2-2373I1.2A0A1W2PRP0 233 aa12.7□□□□□ -0.38
CCDC90B-202ENST00000455220 SPP1P10451 314 aa12.7□□□□□ -0.38
CCDC90B-202ENST00000455220 MYCNOSP40205 109 aa12.7□□□□□ -0.38
CCDC90B-202ENST00000455220 KLF5Q13887 457 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-202ENST00000455220 TMEM190Q8WZ59 177 aa12.7□□□□□ -0.38
CCDC90B-202ENST00000455220 ST8SIA2Q92186 375 aa12.7□□□□□ -0.38
CCDC90B-202ENST00000455220 RCC1LQ96I51 464 aaKnown RBP12.7□□□□□ -0.38
CCDC90B-202ENST00000455220 SH3BGRL3Q9H299 93 aa12.7□□□□□ -0.38
CCDC90B-202ENST00000455220 SLC39A9Q9NUM3 307 aa12.7□□□□□ -0.38
CCDC90B-202ENST00000455220 RFNGQ9Y644 331 aa12.7□□□□□ -0.38
CCDC90B-202ENST00000455220 WNK1Q9H4A3 2382 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 IL4P05112 153 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 SLURP1P55000 103 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 FAM106AQ4KMX7 169 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 UNQ9165/PRO28630Q6UXU0 137 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 REC114Q7Z4M0 266 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 RNF125Q96EQ8 232 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 TRRAPQ9Y4A5 3859 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 LGALS9O00182 355 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 YIF1AO95070 293 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 TSPAN15O95858 294 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 SEC11BP0C7V7 166 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 SERF2P84101 59 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 PXDC1Q5TGL8 231 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 C1QL4Q86Z23 238 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 OR4F17Q8NGA8 305 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 OR4F4Q96R69 305 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 SLC25A32Q9H2D1 315 aa12.69□□□□□ -0.38
CCDC90B-202ENST00000455220 A8MWP6 167 aa12.68□□□□□ -0.38
CCDC90B-202ENST00000455220 USF2Q15853 346 aaPredicted RBP12.68□□□□□ -0.38
CCDC90B-202ENST00000455220 Q6ZRG5 221 aa12.68□□□□□ -0.38
CCDC90B-202ENST00000455220 SYNJ2BPP57105 145 aa12.67□□□□□ -0.38
CCDC90B-202ENST00000455220 LYZP61626 148 aa12.67□□□□□ -0.38
CCDC90B-202ENST00000455220 FFAR4Q5NUL3 377 aa12.67□□□□□ -0.38
CCDC90B-202ENST00000455220 DLX4Q92988 240 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-202ENST00000455220 MRPL27Q9P0M9 148 aaKnown RBP12.67□□□□□ -0.38
CCDC90B-202ENST00000455220 IGHV3OR16-8A0A075B7F1 116 aa12.66□□□□□ -0.38
CCDC90B-202ENST00000455220 K7EMT4 169 aa12.66□□□□□ -0.38
CCDC90B-202ENST00000455220 PATE2Q6UY27 113 aa12.66□□□□□ -0.38
CCDC90B-202ENST00000455220 PHYHIPLQ96FC7 376 aa12.66□□□□□ -0.38
CCDC90B-202ENST00000455220 ELOA3CA0A087WX78 387 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 ZNF320A2RRD8 509 aa12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 HYPMO75409 117 aa12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 ORM2P19652 201 aa12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 ELLP55199 621 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 GCSAMLQ5JQS6 135 aa12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 EIF5AL1Q6IS14 154 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 OR1L4Q8NGR5 311 aa12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 OR1B1Q8NGR6 318 aa12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 TMED6Q8WW62 240 aa12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 TMEM37Q8WXS4 190 aa12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 C20orf24Q9BUV8 137 aa12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 PBDC1Q9BVG4 233 aa12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 DAZ1Q9NQZ3 744 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 UFC1Q9Y3C8 167 aa12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 VWFP04275 2813 aa12.65□□□□□ -0.38
CCDC90B-202ENST00000455220 PF4P02776 101 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 M6PRP20645 277 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 GATAD1Q8WUU5 269 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms