RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 C3orf85A0A1B0GTC6 90 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 RORCP51449 518 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 LYZP61626 148 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ZNF90Q03938 601 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 OR2F1Q13607 317 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SCGB2B2Q4G0G5 96 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 RNASE10Q5GAN6 216 aaKnown RBP4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 IGFL4Q6B9Z1 124 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 FAM219AQ8IW50 185 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 BAP18Q8IXM2 172 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 CADM3Q8N126 398 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 C1orf158Q8N1D5 194 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 OR1S2Q8NGQ3 325 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 OR52I2Q8NH67 350 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 COQ8AQ8NI60 647 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 MARCH1Q8TCQ1 289 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 NPIPB3Q92617 1050 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 NIPSNAP3BQ9BS92 247 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 YTHDF1Q9BYJ9 559 aaKnown RBP4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 HEYLQ9NQ87 328 aaPredicted RBP4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 KLK11Q9UBX7 282 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 RFNGQ9Y644 331 aa4.23□□□□□ -1.73
HLA-DPA3-207ENST00000454398 RPS10-NUDT3A0A1W2PQS6 291 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 CEBPZOSA8MTT3 80 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ZNF705GA8MUZ8 300 aaPredicted RBP4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 INS-IGF2F8WCM5 200 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 M0R2Z0 102 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 CORTO00230 105 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SOCS3O14543 225 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 BUB3O43684 328 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 NUDT3O95989 172 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 DEFB130BP0DP73 79 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 DEFB130AP0DP74 79 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 PSG1P11464 419 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ZNF182P17025 639 aaPredicted RBP4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 S100A1P23297 94 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 UCP1P25874 307 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 NPY1RP25929 384 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 KRTAP10-2P60368 255 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 RND3P61587 244 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 VBP1P61758 197 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 DAD1P61803 113 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 NUTF2P61970 127 aaKnown RBP4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 DLK1P80370 383 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 CD300CQ08708 224 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 FCN2Q15485 313 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SPINK13Q1W4C9 94 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SOHLH1Q5JUK2 328 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 FAM78BQ5VT40 261 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SPATA12Q7Z6I5 190 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 LHFPL1Q86WI0 220 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 Q8WTZ3 238 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 YIPF6Q96EC8 236 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 RNF125Q96EQ8 232 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 RRNAD1Q96FB5 475 aaKnown RBP4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 C7orf50Q9BRJ6 194 aaKnown RBP4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ATG101Q9BSB4 218 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 C1QTNF4Q9BXJ3 329 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SAV1Q9H4B6 383 aaPredicted RBP4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 FAM212BQ9NTI7 297 aaPredicted RBP4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 COPZ2Q9P299 210 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 TMED3Q9Y3Q3 217 aa4.22□□□□□ -1.73
HLA-DPA3-207ENST00000454398 IGKV1D-37A0A075B6S9 117 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TRAV12-2A0A075B6T6 113 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 FAM25AB3EWG3 89 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 FAM25CB3EWG5 89 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 FAM25GB3EWG6 89 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SCGB2A1O75556 95 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 CDK2AP2O75956 126 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TOMM40O96008 361 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 HBE1P02100 147 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RD3LP0DJH9 198 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 HTR2BP41595 481 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 NKX2-1P43699 371 aaPredicted RBP4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SUB1P53999 127 aaKnown RBP eCLIP4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TMBIM6P55061 237 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 UCP3P55916 312 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SPCS3P61009 180 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SPCS2Q15005 226 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ZNF79Q15937 498 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TMEM268Q5VZI3 342 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 LPCAT3Q6P1A2 487 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 FOXI2Q6ZQN5 318 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 AKAP14Q86UN6 197 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SLC7A5P1Q8MH63 180 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RNF182Q8N6D2 247 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ZNRF2Q8NHG8 242 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RAB2BQ8WUD1 216 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 S100ZQ8WXG8 99 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 C17orf77Q96MU5 243 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 UHRF2Q96PU4 802 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TMEM208Q9BTX3 173 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SLC25A32Q9H2D1 315 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SLC25A22Q9H936 323 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SCPEP1Q9HB40 452 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SCRT2Q9NQ03 307 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TMA7Q9Y2S6 64 aaKnown RBP4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 GOLT1BQ9Y3E0 138 aa4.21□□□□□ -1.74
HLA-DPA3-207ENST00000454398 A0A0J9YX75 114 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TEX13DA0A0J9YY54 714 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms