RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 IFNA10P01566 189 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 RD3LP0DJH9 198 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 AP2S1P53680 142 aaPredicted RBP13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 PRR20EP86478 221 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 PRR20CP86479 221 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 PRR20DP86480 221 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 PRR20BP86481 221 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 PRR20AP86496 221 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 PSMG4Q5JS54 123 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 NOXA1Q86UR1 476 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 LGI3Q8N145 548 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 MCUBQ9NWR8 336 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 CLEC5AQ9NY25 188 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 MIFP14174 115 aa13.38□□□□□ -0.27
UBE2D4-208ENST00000454350 EIF2B2P49770 351 aaKnown RBP13.38□□□□□ -0.27
UBE2D4-208ENST00000454350 OR51G1Q8NGK1 321 aa13.38□□□□□ -0.27
UBE2D4-208ENST00000454350 SEPSECSQ9HD40 501 aaKnown RBP13.38□□□□□ -0.27
UBE2D4-208ENST00000454350 NRN1Q9NPD7 142 aa13.38□□□□□ -0.27
UBE2D4-208ENST00000454350 APLNQ9ULZ1 77 aa13.38□□□□□ -0.27
UBE2D4-208ENST00000454350 IFNA4P05014 189 aa13.37□□□□□ -0.27
UBE2D4-208ENST00000454350 GAMTQ14353 236 aa13.37□□□□□ -0.27
UBE2D4-208ENST00000454350 SIGLEC15Q6ZMC9 328 aa13.37□□□□□ -0.27
UBE2D4-208ENST00000454350 MCFD2Q8NI22 146 aa13.37□□□□□ -0.27
UBE2D4-208ENST00000454350 C2CD4CQ8TF44 421 aa13.37□□□□□ -0.27
UBE2D4-208ENST00000454350 RNF125Q96EQ8 232 aa13.37□□□□□ -0.27
UBE2D4-208ENST00000454350 V9GYH0 126 aa13.37□□□□□ -0.27
UBE2D4-208ENST00000454350 H3BMM0 161 aa13.36□□□□□ -0.27
UBE2D4-208ENST00000454350 GPX4P36969 197 aaPredicted RBP13.36□□□□□ -0.27
UBE2D4-208ENST00000454350 ZNF90Q03938 601 aa13.36□□□□□ -0.27
UBE2D4-208ENST00000454350 ZNF79Q15937 498 aa13.36□□□□□ -0.27
UBE2D4-208ENST00000454350 HLA-DMBP28068 263 aa13.35□□□□□ -0.27
UBE2D4-208ENST00000454350 ATP5IP56385 69 aaPredicted RBP13.35□□□□□ -0.27
UBE2D4-208ENST00000454350 TCTAP57738 103 aa13.35□□□□□ -0.27
UBE2D4-208ENST00000454350 SRPXP78539 464 aa13.35□□□□□ -0.27
UBE2D4-208ENST00000454350 LRTM2Q8N967 370 aa13.35□□□□□ -0.27
UBE2D4-208ENST00000454350 IGKV1OR2-108A0A075B7D4 117 aa13.34□□□□□ -0.27
UBE2D4-208ENST00000454350 DUXBA0A1W2PPF3 345 aa13.34□□□□□ -0.27
UBE2D4-208ENST00000454350 ANXA3P12429 323 aa13.34□□□□□ -0.27
UBE2D4-208ENST00000454350 DEFB1P60022 68 aa13.34□□□□□ -0.27
UBE2D4-208ENST00000454350 TMEM128Q5BJH2 165 aa13.34□□□□□ -0.27
UBE2D4-208ENST00000454350 GDF5OSQ5U4N7 250 aa13.34□□□□□ -0.27
UBE2D4-208ENST00000454350 OR8G2PQ6IF36 304 aa13.34□□□□□ -0.27
UBE2D4-208ENST00000454350 Q6ZTC4 211 aa13.34□□□□□ -0.27
UBE2D4-208ENST00000454350 OR1S1Q8NH92 325 aa13.34□□□□□ -0.27
UBE2D4-208ENST00000454350 WDR12Q9GZL7 423 aaKnown RBP13.34□□□□□ -0.27
UBE2D4-208ENST00000454350 TBC1D24Q9ULP9 559 aa13.34□□□□□ -0.27
UBE2D4-208ENST00000454350 CELA1Q9UNI1 258 aa13.34□□□□□ -0.27
UBE2D4-208ENST00000454350 C11orf94C9JXX5 98 aa13.33□□□□□ -0.28
UBE2D4-208ENST00000454350 SOCS3O14543 225 aa13.33□□□□□ -0.28
UBE2D4-208ENST00000454350 HLA-DRB4P13762 266 aa13.33□□□□□ -0.28
UBE2D4-208ENST00000454350 SNRPD3P62318 126 aaKnown RBP13.33□□□□□ -0.28
UBE2D4-208ENST00000454350 TMED4Q7Z7H5 227 aa13.33□□□□□ -0.28
UBE2D4-208ENST00000454350 HLA-DRB4X5D2U9 266 aa13.33□□□□□ -0.28
UBE2D4-208ENST00000454350 IGLL5B9A064 214 aa13.32□□□□□ -0.28
UBE2D4-208ENST00000454350 PRSS46E5RG02 174 aa13.32□□□□□ -0.28
UBE2D4-208ENST00000454350 SLC25A6P12236 298 aa13.32□□□□□ -0.28
UBE2D4-208ENST00000454350 NKX2-1P43699 371 aaPredicted RBP13.32□□□□□ -0.28
UBE2D4-208ENST00000454350 GSG1LQ6UXU4 331 aa13.32□□□□□ -0.28
UBE2D4-208ENST00000454350 THAP8Q8NA92 274 aa13.32□□□□□ -0.28
UBE2D4-208ENST00000454350 XCL2Q9UBD3 114 aa13.32□□□□□ -0.28
UBE2D4-208ENST00000454350 HECTD4Q9Y4D8 3996 aa13.31□□□□□ -0.28
UBE2D4-208ENST00000454350 ZFP92A6NM28 416 aa13.31□□□□□ -0.28
UBE2D4-208ENST00000454350 IAPPP10997 89 aa13.31□□□□□ -0.28
UBE2D4-208ENST00000454350 FAUP35544 74 aaKnown RBP13.31□□□□□ -0.28
UBE2D4-208ENST00000454350 C12orf74Q32Q52 190 aa13.31□□□□□ -0.28
UBE2D4-208ENST00000454350 PYDC2Q56P42 97 aa13.31□□□□□ -0.28
UBE2D4-208ENST00000454350 TOMM5Q8N4H5 51 aa13.31□□□□□ -0.28
UBE2D4-208ENST00000454350 SLC35E1Q96K37 410 aa13.31□□□□□ -0.28
UBE2D4-208ENST00000454350 TRGV9Q99603 122 aa13.31□□□□□ -0.28
UBE2D4-208ENST00000454350 PBDC1Q9BVG4 233 aa13.31□□□□□ -0.28
UBE2D4-208ENST00000454350 NOL3O60936 208 aaKnown RBP13.3□□□□□ -0.28
UBE2D4-208ENST00000454350 PPP1R1AQ13522 171 aa13.3□□□□□ -0.28
UBE2D4-208ENST00000454350 ZNF705AQ6ZN79 300 aaPredicted RBP13.3□□□□□ -0.28
UBE2D4-208ENST00000454350 CCDC190Q86UF4 302 aa13.3□□□□□ -0.28
UBE2D4-208ENST00000454350 C17orf77Q96MU5 243 aa13.3□□□□□ -0.28
UBE2D4-208ENST00000454350 TRAV10A0A0B4J240 114 aa13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 SFT2D2O95562 160 aa13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 VAMP1P23763 118 aa13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 NUP62P37198 522 aaPredicted RBP13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 AP3S2P59780 193 aa13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 LYZP61626 148 aa13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 OR2F1Q13607 317 aa13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 C1orf194Q5T5A4 169 aa13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 DEDD2Q8WXF8 326 aa13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 CLUHP3Q96NS8 147 aa13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 SLC25A21Q9BQT8 299 aaPredicted RBP13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 C1QTNF4Q9BXJ3 329 aa13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 RBM38Q9H0Z9 239 aaKnown RBP13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 SAV1Q9H4B6 383 aaPredicted RBP13.29□□□□□ -0.28
UBE2D4-208ENST00000454350 IGHV4-4A0A075B6R2 117 aa13.28□□□□□ -0.28
UBE2D4-208ENST00000454350 PIGBOS1A0A0B4J2F0 54 aa13.28□□□□□ -0.28
UBE2D4-208ENST00000454350 ZNF705FA8MVS1 300 aaPredicted RBP13.28□□□□□ -0.28
UBE2D4-208ENST00000454350 SNRPGP15A8MWD9 76 aa13.28□□□□□ -0.28
UBE2D4-208ENST00000454350 ZNF705DP0CH99 300 aaPredicted RBP13.28□□□□□ -0.28
UBE2D4-208ENST00000454350 ZNF705BP0CI00 300 aaPredicted RBP13.28□□□□□ -0.28
UBE2D4-208ENST00000454350 NUTF2P61970 127 aaKnown RBP13.28□□□□□ -0.28
UBE2D4-208ENST00000454350 ZNF767PQ75MW2 155 aa13.28□□□□□ -0.28
UBE2D4-208ENST00000454350 ZNF709Q8N972 641 aa13.28□□□□□ -0.28
UBE2D4-208ENST00000454350 SCRT1Q9BWW7 348 aa13.28□□□□□ -0.28
UBE2D4-208ENST00000454350 MAGT1Q9H0U3 335 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms