RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 PAIP2BQ9ULR5 123 aaKnown RBP6.38□□□□□ -1.39
RFX3-209ENST00000451859 V9GYH0 126 aa6.38□□□□□ -1.39
RFX3-209ENST00000451859 KNCNA6PVL3 124 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 DEFB4AO15263 64 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 IFNA4P05014 189 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 IL4P05112 153 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 CD5P06127 495 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 HNRNPCP07910 306 aaKnown RBP eCLIP6.37□□□□□ -1.39
RFX3-209ENST00000451859 IAPPP10997 89 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 SLC25A4P12235 298 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 CRYBB3P26998 211 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 CCR6P51684 374 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 AP3S2P59780 193 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 SRPXP78539 464 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 ZNF79Q15937 498 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 NMSQ5H8A3 153 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 STHQ8IWL8 128 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 OR11H2Q8NH07 326 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 RNASEH2CQ8TDP1 164 aaKnown RBP6.37□□□□□ -1.39
RFX3-209ENST00000451859 Q8WTZ3 238 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 RARRES2Q99969 163 aa6.37□□□□□ -1.39
RFX3-209ENST00000451859 LINC00854A0A1B0GVQ3 168 aa6.36□□□□□ -1.39
RFX3-209ENST00000451859 K7EQG2 157 aa6.36□□□□□ -1.39
RFX3-209ENST00000451859 INPP1P49441 399 aa6.36□□□□□ -1.39
RFX3-209ENST00000451859 DHRS2Q13268 280 aa6.36□□□□□ -1.39
RFX3-209ENST00000451859 USF2Q15853 346 aaPredicted RBP6.36□□□□□ -1.39
RFX3-209ENST00000451859 ETFRF1Q6IPR1 90 aa6.36□□□□□ -1.39
RFX3-209ENST00000451859 NOXA1Q86UR1 476 aa6.36□□□□□ -1.39
RFX3-209ENST00000451859 OR51G1Q8NGK1 321 aa6.36□□□□□ -1.39
RFX3-209ENST00000451859 PBDC1Q9BVG4 233 aa6.36□□□□□ -1.39
RFX3-209ENST00000451859 HSPB7Q9UBY9 170 aa6.36□□□□□ -1.39
RFX3-209ENST00000451859 FBXL17Q9UF56 701 aa6.36□□□□□ -1.39
RFX3-209ENST00000451859 TRAV2A0A0B4J234 112 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 NUPR2A6NF83 97 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 ZFP92A6NM28 416 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 LY6G6CO95867 125 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 TOMM40O96008 361 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 HOXB5P09067 269 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 RD3LP0DJH9 198 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 EIF2B2P49770 351 aaKnown RBP6.35□□□□□ -1.39
RFX3-209ENST00000451859 YPEL3P61236 119 aaPredicted RBP6.35□□□□□ -1.39
RFX3-209ENST00000451859 PPP1R1AQ13522 171 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 OR2F1Q13607 317 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 TMEM128Q5BJH2 165 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 PSMG4Q5JS54 123 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 ACTL10Q5JWF8 245 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 C16orf54Q6UWD8 224 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 TMEM217Q8N7C4 229 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 GLMPQ8WWB7 406 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 SLC35E1Q96K37 410 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 MAGT1Q9H0U3 335 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 RBM38Q9H0Z9 239 aaKnown RBP6.35□□□□□ -1.39
RFX3-209ENST00000451859 CACFD1Q9UGQ2 172 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 U3KQ87 197 aa6.35□□□□□ -1.39
RFX3-209ENST00000451859 HELTA6NFD8 242 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 PSG1P11464 419 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 C4BPBP20851 252 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 NANOS2P60321 138 aaKnown RBP6.34□□□□□ -1.39
RFX3-209ENST00000451859 LYZP61626 148 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 ZNF90Q03938 601 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 SPANXN2Q5MJ10 180 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 TRIQKQ629K1 86 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 CEMP1Q6PRD7 247 aaPredicted RBP6.34□□□□□ -1.39
RFX3-209ENST00000451859 GSG1LQ6UXU4 331 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 TRPT1Q86TN4 253 aaKnown RBP6.34□□□□□ -1.39
RFX3-209ENST00000451859 CCDC190Q86UF4 302 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 CENPSQ8N2Z9 138 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 DCANP1Q8TF63 244 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 GATAD1Q8WUU5 269 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 PHLDA1Q8WV24 401 aaPredicted RBP6.34□□□□□ -1.39
RFX3-209ENST00000451859 LINC00476Q8WZB0 136 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 RNF125Q96EQ8 232 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 CLEC5AQ9NY25 188 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 U3KQE9 123 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 BIRC6Q9NR09 4857 aa6.34□□□□□ -1.39
RFX3-209ENST00000451859 DUXBA0A1W2PPF3 345 aa6.33□□□□□ -1.4
RFX3-209ENST00000451859 H3BP45 60 aa6.33□□□□□ -1.4
RFX3-209ENST00000451859 WRBO00258 174 aa6.33□□□□□ -1.4
RFX3-209ENST00000451859 SFT2D2O95562 160 aa6.33□□□□□ -1.4
RFX3-209ENST00000451859 DEFB1P60022 68 aa6.33□□□□□ -1.4
RFX3-209ENST00000451859 RAB11AP62491 216 aa6.33□□□□□ -1.4
RFX3-209ENST00000451859 GAMTQ14353 236 aa6.33□□□□□ -1.4
RFX3-209ENST00000451859 SIGLEC15Q6ZMC9 328 aa6.33□□□□□ -1.4
RFX3-209ENST00000451859 PPP1R14BQ96C90 147 aa6.33□□□□□ -1.4
RFX3-209ENST00000451859 SRRQ9GZT4 340 aa6.33□□□□□ -1.4
RFX3-209ENST00000451859 KLK5Q9Y337 293 aaPredicted RBP6.33□□□□□ -1.4
RFX3-209ENST00000451859 KMT2AQ03164 3969 aa6.33□□□□□ -1.4
RFX3-209ENST00000451859 IGKV1D-37A0A075B6S9 117 aa6.32□□□□□ -1.4
RFX3-209ENST00000451859 FAM90A26D6RGX4 464 aa6.32□□□□□ -1.4
RFX3-209ENST00000451859 BUB3O43684 328 aa6.32□□□□□ -1.4
RFX3-209ENST00000451859 PITX3O75364 302 aa6.32□□□□□ -1.4
RFX3-209ENST00000451859 ADAP1O75689 374 aa6.32□□□□□ -1.4
RFX3-209ENST00000451859 IGKV3-20P01619 116 aa6.32□□□□□ -1.4
RFX3-209ENST00000451859 AP2S1P53680 142 aaPredicted RBP6.32□□□□□ -1.4
RFX3-209ENST00000451859 BAK1Q16611 211 aa6.32□□□□□ -1.4
RFX3-209ENST00000451859 SPANXN5Q5MJ07 72 aa6.32□□□□□ -1.4
RFX3-209ENST00000451859 C11orf45Q8TAV5 145 aa6.32□□□□□ -1.4
RFX3-209ENST00000451859 SLC25A21Q9BQT8 299 aaPredicted RBP6.32□□□□□ -1.4
RFX3-209ENST00000451859 NRN1Q9NPD7 142 aa6.32□□□□□ -1.4
RFX3-209ENST00000451859 FLVCR2Q9UPI3 526 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms