RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, human

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMS1-217	ENST00000450931	CDPF1	Q6NVV7	123 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	SPART	Q8N0X7	666 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	MAGT1	Q9H0U3	335 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931		Q9H3A6	140 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931		A0A0J9YX75	114 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	ATP5G1	P05496	136 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	RD3L	P0DJH9	198 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	UCP1	P25874	307 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	ETV6	P41212	452 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	ATP5G3	P48201	142 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	CCDC71L	Q8N9Z2	235 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	OR51G1	Q8NGK1	321 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	NRG4	Q8WWG1	115 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	RNF125	Q96EQ8	232 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	RRNAD1	Q96FB5	475 aa	Known RBP	4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	ABHD1	Q96SE0	405 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	RPRM	Q9NS64	109 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	KLK11	Q9UBX7	282 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	LINC00588	Q9Y4M8	146 aa		4.61	□□□□□ -1.67
PMS1-217	ENST00000450931	CBY3	A6NI87	242 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	FABP1	P07148	127 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	OR4B1	Q8NGF8	309 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	OR4C16	Q8NGL9	310 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	CNBD2	Q96M20	576 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	SLC35B3	Q9H1N7	401 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	PTTG2	Q9NZH5	202 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	DOK5	Q9P104	306 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	RAB26	Q9ULW5	256 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	C3orf85	A0A1B0GTC6	90 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931		M0QYG6	137 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	DUSP14	O95147	198 aa	Known RBP	4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	INS	P01308	110 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	TBP	P20226	339 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	HLA-DMA	P28067	261 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	ATP5I	P56385	69 aa	Predicted RBP	4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	FXYD7	P58549	80 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	MLANA	Q16655	118 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	IZUMO4	Q1ZYL8	232 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	LHFPL1	Q86WI0	220 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	ARRDC1	Q8N5I2	433 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	TP53RK	Q96S44	253 aa		4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	HEYL	Q9NQ87	328 aa	Predicted RBP	4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	4.6	□□□□□ -1.67
PMS1-217	ENST00000450931	NUDT3	O95989	172 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	IGKV3-20	P01619	116 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	PSG1	P11464	419 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	PIGP	P57054	158 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	TRIM16L	Q309B1	348 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	NMS	Q5H8A3	153 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	FAM78B	Q5VT40	261 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	AMTN	Q6UX39	209 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	LYPD1	Q8N2G4	141 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	ZFAND1	Q8TCF1	268 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	LINC00052	Q96N35	136 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	TMEM208	Q9BTX3	173 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	PGPEP1	Q9NXJ5	209 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	SLC45A2	Q9UMX9	530 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	DNAH5	Q8TE73	4624 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931		F5H768	121 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931		H3BNG1	76 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	CFD	P00746	253 aa	Predicted RBP	4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	CLINT1	Q14677	625 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	SSX7	Q7RTT5	188 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	TMEM256	Q8N2U0	113 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	SAMD12	Q8N8I0	201 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	RNASE11	Q8TAA1	199 aa	Known RBP	4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	RNF141	Q8WVD5	230 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	NPIPB3	Q92617	1050 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	FRZB	Q92765	325 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	GPR146	Q96CH1	333 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931		Q9H8V8	135 aa		4.59	□□□□□ -1.67
PMS1-217	ENST00000450931	PGAM2	P15259	253 aa		4.59	□□□□□ -1.68
PMS1-217	ENST00000450931	S100A7	P31151	101 aa		4.59	□□□□□ -1.68
PMS1-217	ENST00000450931	KRTAP10-2	P60368	255 aa		4.59	□□□□□ -1.68
PMS1-217	ENST00000450931	GPR141	Q7Z602	305 aa		4.59	□□□□□ -1.68
PMS1-217	ENST00000450931	OR10J6P	Q8NGY7	276 aa		4.59	□□□□□ -1.68
PMS1-217	ENST00000450931	WDR12	Q9GZL7	423 aa	Known RBP	4.59	□□□□□ -1.68
PMS1-217	ENST00000450931	MRPS16	Q9Y3D3	137 aa	Known RBP	4.59	□□□□□ -1.68
PMS1-217	ENST00000450931		A0A0G2JRQ6	117 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	LOC100506127	A0A0U1RQW1	187 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	EREG	O14944	169 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	IZUMO2	Q6UXV1	221 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	C16orf74	Q96GX8	76 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	GPR82	Q96P67	336 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	COPZ2	Q9P299	210 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	SMIM31	A0A1B0GVY4	71 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	PLAC8L1	A1L4L8	177 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	ADAP1	O75689	374 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	NXPH3	O95157	252 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	CDS2	O95674	445 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	APOA1	P02647	267 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	GPX4	P36969	197 aa	Predicted RBP	4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	RNASE10	Q5GAN6	216 aa	Known RBP	4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	ZNF493	Q6ZR52	646 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	OR11H7	Q8NGC8	314 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	OR4D5	Q8NGN0	318 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	ACY3	Q96HD9	319 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	TMEM222	Q9H0R3	208 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931		U3KQ87	197 aa		4.58	□□□□□ -1.68
PMS1-217	ENST00000450931	CEBPZOS	A8MTT3	80 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms